RNA–Protein interactions for RNA: YHR066W

SSF1, Transcript of Constituent of 66S pre-ribosomal particles, yeastyeast

Gene SSF1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF1YHR066W VPS5Q92331 675 aa3.38□□□□□ -1.87
SSF1YHR066W TPK2P06245 380 aa3.38□□□□□ -1.87
SSF1YHR066W HOP1P20050 605 aa3.38□□□□□ -1.87
SSF1YHR066W CWH43P25618 953 aa3.38□□□□□ -1.87
SSF1YHR066W YMC1P32331 307 aa3.38□□□□□ -1.87
SSF1YHR066W CUE2P36075 443 aaKnown RBP3.38□□□□□ -1.87
SSF1YHR066W MAD2P40958 196 aa3.38□□□□□ -1.87
SSF1YHR066W MRK1P50873 501 aa3.38□□□□□ -1.87
SSF1YHR066W YGL117WP53133 265 aa3.38□□□□□ -1.87
SSF1YHR066W TGL2P54857 326 aa3.38□□□□□ -1.87
SSF1YHR066W RPS15Q01855 142 aaKnown RBP3.38□□□□□ -1.87
SSF1YHR066W MFM1Q02783 413 aa3.38□□□□□ -1.87
SSF1YHR066W CEF1Q03654 590 aaPredicted RBP3.38□□□□□ -1.87
SSF1YHR066W DIN7Q12086 430 aa3.38□□□□□ -1.87
SSF1YHR066W SLX4Q12098 748 aa3.38□□□□□ -1.87
SSF1YHR066W TUF1P02992 437 aaKnown RBP3.37□□□□□ -1.87
SSF1YHR066W LEU2P04173 364 aaPredicted RBP3.37□□□□□ -1.87
SSF1YHR066W VPS33P20795 691 aa3.37□□□□□ -1.87
SSF1YHR066W ARG1P22768 420 aa3.37□□□□□ -1.87
SSF1YHR066W SAT4P25333 603 aaKnown RBP3.37□□□□□ -1.87
SSF1YHR066W ILV6P25605 309 aaKnown RBP3.37□□□□□ -1.87
SSF1YHR066W DHR2P36009 735 aaPredicted RBP3.37□□□□□ -1.87
SSF1YHR066W YJL193WP39542 402 aa3.37□□□□□ -1.87
SSF1YHR066W STL1P39932 569 aa3.37□□□□□ -1.87
SSF1YHR066W THI6P41835 540 aa3.37□□□□□ -1.87
SSF1YHR066W BUD17P53727 317 aa3.37□□□□□ -1.87
SSF1YHR066W YNL034WP53963 612 aa3.37□□□□□ -1.87
SSF1YHR066W YNL018CP53976 612 aa3.37□□□□□ -1.87
SSF1YHR066W ARG7Q04728 441 aa3.37□□□□□ -1.87
SSF1YHR066W URA3P03962 267 aa3.36□□□□□ -1.87
SSF1YHR066W PCK1P10963 549 aa3.36□□□□□ -1.87
SSF1YHR066W RPA135P22138 1203 aaKnown RBP3.36□□□□□ -1.87
SSF1YHR066W CAP1P28495 268 aaKnown RBP3.36□□□□□ -1.87
SSF1YHR066W UGP1P32861 499 aaKnown RBP3.36□□□□□ -1.87
SSF1YHR066W YPT10P38146 199 aa3.36□□□□□ -1.87
SSF1YHR066W YIL092WP40497 633 aa3.36□□□□□ -1.87
SSF1YHR066W HOL1P53389 586 aa3.36□□□□□ -1.87
SSF1YHR066W CPR8P53728 308 aa3.36□□□□□ -1.87
SSF1YHR066W YNR071CP53757 342 aa3.36□□□□□ -1.87
SSF1YHR066W USA1Q03714 838 aa3.36□□□□□ -1.87
SSF1YHR066W ULA1Q12059 462 aa3.36□□□□□ -1.87
SSF1YHR066W NDJ1Q12366 352 aa3.36□□□□□ -1.87
SSF1YHR066W PIH1P38768 344 aa3.35□□□□□ -1.87
SSF1YHR066W IMO32P53219 342 aa3.35□□□□□ -1.87
SSF1YHR066W PEX8P53248 589 aa3.35□□□□□ -1.87
SSF1YHR066W SND1Q04007 877 aa3.35□□□□□ -1.87
SSF1YHR066W YPL216WQ08964 1102 aa3.35□□□□□ -1.87
SSF1YHR066W ZPS1Q12512 249 aa3.35□□□□□ -1.87
SSF1YHR066W CPA2P03965 1118 aaKnown RBP3.34□□□□□ -1.88
SSF1YHR066W ADE5,7P07244 802 aaKnown RBP3.34□□□□□ -1.88
SSF1YHR066W AAD3P25612 363 aa3.34□□□□□ -1.88
SSF1YHR066W PET309P32522 965 aaPredicted RBP3.34□□□□□ -1.88
SSF1YHR066W DSS4P32601 143 aa3.34□□□□□ -1.88
SSF1YHR066W TOM20P35180 183 aa3.34□□□□□ -1.88
SSF1YHR066W MDR1P53258 950 aa3.34□□□□□ -1.88
SSF1YHR066W COQ6P53318 479 aa3.34□□□□□ -1.88
SSF1YHR066W YDL073WQ07454 984 aa3.34□□□□□ -1.88
SSF1YHR066W OSW1Q08692 278 aa3.34□□□□□ -1.88
SSF1YHR066W PMA2P19657 947 aa3.33□□□□□ -1.88
SSF1YHR066W VPS34P22543 875 aa3.33□□□□□ -1.88
SSF1YHR066W PHO3P24031 467 aa3.33□□□□□ -1.88
SSF1YHR066W CCL1P37366 393 aa3.33□□□□□ -1.88
SSF1YHR066W RIM4P38741 713 aa3.33□□□□□ -1.88
SSF1YHR066W SSP120P39931 234 aaKnown RBP3.33□□□□□ -1.88
SSF1YHR066W SCS2P40075 244 aaKnown RBP3.33□□□□□ -1.88
SSF1YHR066W PUS4P48567 403 aaKnown RBP3.33□□□□□ -1.88
SSF1YHR066W SAP4P53036 818 aa3.33□□□□□ -1.88
SSF1YHR066W CNM67P53865 581 aaKnown RBP3.33□□□□□ -1.88
SSF1YHR066W FMP30Q02883 468 aa3.33□□□□□ -1.88
SSF1YHR066W HOF1Q05080 669 aa3.33□□□□□ -1.88
SSF1YHR066W MRN1Q08925 612 aaKnown RBP RIP-Chip data3.33□□□□□ -1.88not detected
SSF1YHR066W NUR1Q12066 484 aa3.33□□□□□ -1.88
SSF1YHR066W PSF3Q12146 194 aa3.33□□□□□ -1.88
SSF1YHR066W HOS1Q12214 470 aa3.33□□□□□ -1.88
SSF1YHR066W DBP10Q12389 995 aaKnown RBP3.33□□□□□ -1.88
SSF1YHR066W MPD2Q99316 277 aa3.33□□□□□ -1.88
SSF1YHR066W SEC12P11655 471 aa3.32□□□□□ -1.88
SSF1YHR066W TGL1P34163 548 aa3.32□□□□□ -1.88
SSF1YHR066W STB5P38699 743 aa3.32□□□□□ -1.88
SSF1YHR066W PIP2P52960 996 aa3.32□□□□□ -1.88
SSF1YHR066W COS12P53053 380 aa3.32□□□□□ -1.88
SSF1YHR066W CEG1Q01159 459 aaPredicted RBP3.32□□□□□ -1.88
SSF1YHR066W COQ11Q05892 277 aa3.32□□□□□ -1.88
SSF1YHR066W MRI1Q06489 411 aaKnown RBP3.32□□□□□ -1.88
SSF1YHR066W RPL7AP05737 244 aaKnown RBP3.31□□□□□ -1.88
SSF1YHR066W ADH4P10127 382 aa3.31□□□□□ -1.88
SSF1YHR066W WHI2P12611 486 aa3.31□□□□□ -1.88
SSF1YHR066W RNR3P21672 869 aaKnown RBP3.31□□□□□ -1.88
SSF1YHR066W LOT5P34234 306 aa3.31□□□□□ -1.88
SSF1YHR066W GSM1P42950 618 aa3.31□□□□□ -1.88
SSF1YHR066W TAX4P47030 604 aa3.31□□□□□ -1.88
SSF1YHR066W THI7Q05998 598 aa3.31□□□□□ -1.88
SSF1YHR066W SLK19Q08581 821 aaKnown RBP3.31□□□□□ -1.88
SSF1YHR066W TGS1Q12052 315 aa3.31□□□□□ -1.88
SSF1YHR066W RPL7BQ12213 244 aaKnown RBP3.31□□□□□ -1.88
SSF1YHR066W YNL162W-AQ3E7A8 72 aa3.31□□□□□ -1.88
SSF1YHR066W VAS1P07806 1104 aaKnown RBP3.3□□□□□ -1.88
SSF1YHR066W YPK1P12688 680 aaKnown RBP3.3□□□□□ -1.88
SSF1YHR066W HOM2P13663 365 aaKnown RBP3.3□□□□□ -1.88
SSF1YHR066W CBP3P21560 335 aa3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 35.2 ms