RNA–Protein interactions for RNA: YHR012W

VPS29, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS29, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS29YHR012W CDC33P07260 213 aaKnown RBP5.1□□□□□ -1.59
VPS29YHR012W MSF1P08425 469 aa5.1□□□□□ -1.59
VPS29YHR012W GPA1P08539 472 aa5.1□□□□□ -1.59
VPS29YHR012W PYC1P11154 1178 aaKnown RBP5.1□□□□□ -1.59
VPS29YHR012W DAL2P25335 343 aa5.1□□□□□ -1.59
VPS29YHR012W MRC1P25588 1096 aa5.1□□□□□ -1.59
VPS29YHR012W CCR4P31384 837 aaKnown RBP5.1□□□□□ -1.59
VPS29YHR012W TFB1P32776 642 aa5.1□□□□□ -1.59
VPS29YHR012W RRM3P38766 723 aa5.1□□□□□ -1.59
VPS29YHR012W CRP1P38845 465 aaKnown RBP5.1□□□□□ -1.59
VPS29YHR012W PSY2P40164 858 aa5.1□□□□□ -1.59
VPS29YHR012W UBP7P40453 1071 aa5.1□□□□□ -1.59
VPS29YHR012W BST1P43571 1029 aa5.1□□□□□ -1.59
VPS29YHR012W RTT101P47050 842 aa5.1□□□□□ -1.59
VPS29YHR012W MRX6P48564 524 aa5.1□□□□□ -1.59
VPS29YHR012W ATF2P53296 535 aa5.1□□□□□ -1.59
VPS29YHR012W TDA7P53882 636 aaPredicted RBP5.1□□□□□ -1.59
VPS29YHR012W ESBP6P53918 673 aa5.1□□□□□ -1.59
VPS29YHR012W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.1□□□□□ -1.59not detected
VPS29YHR012W YMR206WQ03695 313 aa5.1□□□□□ -1.59
VPS29YHR012W ARO80Q04052 950 aa5.1□□□□□ -1.59
VPS29YHR012W TY1A-MR1Q04215 440 aa5.1□□□□□ -1.59
VPS29YHR012W VMS1Q04311 632 aaKnown RBP5.1□□□□□ -1.59
VPS29YHR012W YSH1Q06224 779 aaPredicted RBP5.1□□□□□ -1.59
VPS29YHR012W YLR012CQ07927 99 aa5.1□□□□□ -1.59
VPS29YHR012W YOL075CQ08234 1294 aa5.1□□□□□ -1.59
VPS29YHR012W PIN2Q12057 282 aa5.1□□□□□ -1.59
VPS29YHR012W VPS54Q12071 889 aa5.1□□□□□ -1.59
VPS29YHR012W RPS3P05750 240 aaKnown RBP5.09□□□□□ -1.59
VPS29YHR012W PCT1P13259 424 aa5.09□□□□□ -1.59
VPS29YHR012W CYC8P14922 966 aa5.09□□□□□ -1.59
VPS29YHR012W EXO1P39875 702 aa5.09□□□□□ -1.59
VPS29YHR012W SDS3P40505 327 aa5.09□□□□□ -1.59
VPS29YHR012W AIP1P46680 615 aaKnown RBP5.09□□□□□ -1.59
VPS29YHR012W YJR098CP47139 656 aa5.09□□□□□ -1.59
VPS29YHR012W SMA1Q02651 245 aa5.09□□□□□ -1.59
VPS29YHR012W SPG3Q04398 127 aaPredicted RBP5.09□□□□□ -1.59
VPS29YHR012W YAP7Q08182 245 aa5.09□□□□□ -1.59
VPS29YHR012W CIR2Q08822 631 aa5.09□□□□□ -1.59
VPS29YHR012W APL5Q08951 932 aaKnown RBP5.09□□□□□ -1.59
VPS29YHR012W HMI1Q12039 706 aa5.09□□□□□ -1.59
VPS29YHR012W AIM44Q99299 758 aa5.09□□□□□ -1.59
VPS29YHR012W TRS33Q99394 268 aa5.09□□□□□ -1.59
VPS29YHR012W CUP1-1P0CX80 61 aa5.08□□□□□ -1.6
VPS29YHR012W CUP1-2P0CX81 61 aa5.08□□□□□ -1.6
VPS29YHR012W ARF2P19146 181 aaKnown RBP5.08□□□□□ -1.6
VPS29YHR012W VMA4P22203 233 aaKnown RBP5.08□□□□□ -1.6
VPS29YHR012W SEC6P32844 805 aa5.08□□□□□ -1.6
VPS29YHR012W VPS24P36095 224 aaKnown RBP5.08□□□□□ -1.6
VPS29YHR012W PXL1P36166 706 aa5.08□□□□□ -1.6
VPS29YHR012W MRPL40P36534 297 aa5.08□□□□□ -1.6
VPS29YHR012W YPT35P38815 214 aaKnown RBP5.08□□□□□ -1.6
VPS29YHR012W VAC8P39968 578 aa5.08□□□□□ -1.6
VPS29YHR012W RPT2P40327 437 aaKnown RBP5.08□□□□□ -1.6
VPS29YHR012W SAP185P40856 1058 aa5.08□□□□□ -1.6
VPS29YHR012W IML2P47031 731 aa5.08□□□□□ -1.6
VPS29YHR012W PRP24P49960 444 aaKnown RBP5.08□□□□□ -1.6
VPS29YHR012W PEX13P80667 386 aa5.08□□□□□ -1.6
VPS29YHR012W AIM32Q04689 311 aa5.08□□□□□ -1.6
VPS29YHR012W DIS3Q08162 1001 aaKnown RBP5.08□□□□□ -1.6
VPS29YHR012W THI20Q08224 551 aa5.08□□□□□ -1.6
VPS29YHR012W YOR387CQ08910 206 aa5.08□□□□□ -1.6
VPS29YHR012W LCB4Q12246 624 aa5.08□□□□□ -1.6
VPS29YHR012W RAD3P06839 778 aa5.07□□□□□ -1.6
VPS29YHR012W YIH1P25637 258 aa5.07□□□□□ -1.6
VPS29YHR012W IME2P32581 645 aa5.07□□□□□ -1.6
VPS29YHR012W NIP100P33420 868 aa5.07□□□□□ -1.6
VPS29YHR012W SRX1P36077 127 aa5.07□□□□□ -1.6
VPS29YHR012W SAP190P36123 1033 aa5.07□□□□□ -1.6
VPS29YHR012W NPR3P38742 1146 aa5.07□□□□□ -1.6
VPS29YHR012W OSH7P38755 437 aa5.07□□□□□ -1.6
VPS29YHR012W BAT1P38891 393 aaKnown RBP5.07□□□□□ -1.6
VPS29YHR012W PIR3Q03180 325 aa5.07□□□□□ -1.6
VPS29YHR012W YPR078CQ06813 372 aa5.07□□□□□ -1.6
VPS29YHR012W SIL1Q08199 421 aa5.07□□□□□ -1.6
VPS29YHR012W RPN8Q08723 338 aaKnown RBP5.07□□□□□ -1.6
VPS29YHR012W APC11Q12157 165 aa5.07□□□□□ -1.6
VPS29YHR012W SPO21Q12411 609 aa5.07□□□□□ -1.6
VPS29YHR012W GSY2P27472 705 aa5.06□□□□□ -1.6
VPS29YHR012W CAP1P28495 268 aaKnown RBP5.06□□□□□ -1.6
VPS29YHR012W MRP4P32902 394 aa5.06□□□□□ -1.6
VPS29YHR012W SMC1P32908 1225 aa5.06□□□□□ -1.6
VPS29YHR012W PXA2P34230 853 aa5.06□□□□□ -1.6
VPS29YHR012W ABZ1P37254 787 aaPredicted RBP5.06□□□□□ -1.6
VPS29YHR012W QNS1P38795 714 aaKnown RBP5.06□□□□□ -1.6
VPS29YHR012W SAK1P38990 1142 aa5.06□□□□□ -1.6
VPS29YHR012W PRM9P39551 298 aa5.06□□□□□ -1.6
VPS29YHR012W PRK1P40494 810 aa5.06□□□□□ -1.6
VPS29YHR012W TFG2P41896 400 aaPredicted RBP5.06□□□□□ -1.6
VPS29YHR012W STU2P46675 888 aa5.06□□□□□ -1.6
VPS29YHR012W PHO86P46956 311 aa5.06□□□□□ -1.6
VPS29YHR012W AIM23P47015 356 aa5.06□□□□□ -1.6
VPS29YHR012W PEX31P53203 462 aa5.06□□□□□ -1.6
VPS29YHR012W YNR021WP53723 404 aaKnown RBP5.06□□□□□ -1.6
VPS29YHR012W SXM1Q04175 944 aaKnown RBP5.06□□□□□ -1.6
VPS29YHR012W ERV41Q04651 352 aa5.06□□□□□ -1.6
VPS29YHR012W AAD4Q07747 329 aa5.06□□□□□ -1.6
VPS29YHR012W VPS5Q92331 675 aa5.06□□□□□ -1.6
VPS29YHR012W COX3P00420 269 aa5.05□□□□□ -1.6
VPS29YHR012W HSF1P10961 833 aa5.05□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms