RNA–Protein interactions for RNA: YGR193C

PDX1, Transcript of E3-binding protein of the mitochondrial pyruvate dehydrogenase complex, yeastyeast

Gene PDX1, Length 1,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDX1YGR193C CMK1P27466 446 aaKnown RBP3.82□□□□□ -1.8
PDX1YGR193C DBF4P32325 704 aa3.82□□□□□ -1.8
PDX1YGR193C HMX1P32339 317 aa3.82□□□□□ -1.8
PDX1YGR193C PLC1P32383 869 aa3.82□□□□□ -1.8
PDX1YGR193C PET309P32522 965 aaPredicted RBP3.82□□□□□ -1.8
PDX1YGR193C DOA4P32571 926 aa3.82□□□□□ -1.8
PDX1YGR193C YEL043WP32618 956 aa3.82□□□□□ -1.8
PDX1YGR193C PET112P33893 541 aa3.82□□□□□ -1.8
PDX1YGR193C MRP8P35719 219 aa3.82□□□□□ -1.8
PDX1YGR193C STV1P37296 890 aa3.82□□□□□ -1.8
PDX1YGR193C MCM7P38132 845 aa3.82□□□□□ -1.8
PDX1YGR193C ERC1P38767 581 aa3.82□□□□□ -1.8
PDX1YGR193C TOM71P38825 639 aaKnown RBP3.82□□□□□ -1.8
PDX1YGR193C NDC80P40460 691 aa3.82□□□□□ -1.8
PDX1YGR193C LOC1P43586 204 aaPredicted RBP3.82□□□□□ -1.8
PDX1YGR193C MDE1P47095 244 aa3.82□□□□□ -1.8
PDX1YGR193C EXG2P52911 562 aa3.82□□□□□ -1.8
PDX1YGR193C YGR067CP53243 804 aa3.82□□□□□ -1.8
PDX1YGR193C MRPL19P53875 158 aa3.82□□□□□ -1.8
PDX1YGR193C SFB2P53953 876 aa3.82□□□□□ -1.8
PDX1YGR193C INP2Q03824 705 aa3.82□□□□□ -1.8
PDX1YGR193C TIF35Q04067 274 aaKnown RBP3.82□□□□□ -1.8
PDX1YGR193C RSC3Q06639 885 aa3.82□□□□□ -1.8
PDX1YGR193C TRE2Q08693 809 aa3.82□□□□□ -1.8
PDX1YGR193C FLC1Q08967 793 aa3.82□□□□□ -1.8
PDX1YGR193C ACM1Q08981 209 aa3.82□□□□□ -1.8
PDX1YGR193C FAL1Q12099 399 aaKnown RBP3.82□□□□□ -1.8
PDX1YGR193C AHC1Q12433 566 aa3.82□□□□□ -1.8
PDX1YGR193C NUP145P49687 1317 aa3.81□□□□□ -1.8
PDX1YGR193C ILS1P09436 1072 aaKnown RBP3.81□□□□□ -1.8
PDX1YGR193C NPP1P25353 742 aa3.81□□□□□ -1.8
PDX1YGR193C RPC53P25441 422 aa3.81□□□□□ -1.8
PDX1YGR193C RER1P25560 188 aa3.81□□□□□ -1.8
PDX1YGR193C MSH1P25846 959 aa3.81□□□□□ -1.8
PDX1YGR193C HRR25P29295 494 aaKnown RBP3.81□□□□□ -1.8
PDX1YGR193C NIC96P34077 839 aa3.81□□□□□ -1.8
PDX1YGR193C CUE2P36075 443 aaKnown RBP3.81□□□□□ -1.8
PDX1YGR193C YRO2P38079 344 aa3.81□□□□□ -1.8
PDX1YGR193C UBS1P38290 277 aa3.81□□□□□ -1.8
PDX1YGR193C MSG5P38590 489 aa3.81□□□□□ -1.8
PDX1YGR193C MSR1P38714 643 aa3.81□□□□□ -1.8
PDX1YGR193C YHL041WP38730 149 aa3.81□□□□□ -1.8
PDX1YGR193C ACA1P39970 489 aa3.81□□□□□ -1.8
PDX1YGR193C BUD16P39988 312 aa3.81□□□□□ -1.8
PDX1YGR193C ZRG8P40021 1076 aa3.81□□□□□ -1.8
PDX1YGR193C KHA1P40309 873 aa3.81□□□□□ -1.8
PDX1YGR193C YIL161WP40449 235 aaKnown RBP3.81□□□□□ -1.8
PDX1YGR193C RRT14P40470 206 aa3.81□□□□□ -1.8
PDX1YGR193C SKP2P42843 763 aa3.81□□□□□ -1.8
PDX1YGR193C IRC6P43615 237 aa3.81□□□□□ -1.8
PDX1YGR193C ROK1P45818 564 aaPredicted RBP3.81□□□□□ -1.8
PDX1YGR193C LIA1P47120 325 aaKnown RBP3.81□□□□□ -1.8
PDX1YGR193C MLC1P53141 149 aa3.81□□□□□ -1.8
PDX1YGR193C RBG2P53295 368 aaKnown RBP3.81□□□□□ -1.8
PDX1YGR193C MEP3P53390 489 aa3.81□□□□□ -1.8
PDX1YGR193C RET3P53600 189 aa3.81□□□□□ -1.8
PDX1YGR193C IST1P53843 298 aaPredicted RBP3.81□□□□□ -1.8
PDX1YGR193C YNL193WP53870 558 aa3.81□□□□□ -1.8
PDX1YGR193C TFB2Q02939 513 aa3.81□□□□□ -1.8
PDX1YGR193C UME1Q03010 460 aa3.81□□□□□ -1.8
PDX1YGR193C UGO1Q03327 502 aa3.81□□□□□ -1.8
PDX1YGR193C TAF8Q03750 510 aa3.81□□□□□ -1.8
PDX1YGR193C SYF1Q04048 859 aaPredicted RBP3.81□□□□□ -1.8
PDX1YGR193C RBA50Q04418 439 aa3.81□□□□□ -1.8
PDX1YGR193C MGR3Q04472 501 aa3.81□□□□□ -1.8
PDX1YGR193C TDA5Q06417 326 aaKnown RBP3.81□□□□□ -1.8
PDX1YGR193C GNT1Q12096 491 aa3.81□□□□□ -1.8
PDX1YGR193C KCS1Q12494 1050 aa3.81□□□□□ -1.8
PDX1YGR193C LSO2Q3E772 92 aaKnown RBP3.81□□□□□ -1.8
PDX1YGR193C CFT1Q06632 1357 aaKnown RBP3.8□□□□□ -1.8
PDX1YGR193C SWI1P09547 1314 aa3.8□□□□□ -1.8
PDX1YGR193C RPS3P05750 240 aaKnown RBP3.8□□□□□ -1.8
PDX1YGR193C HIS5P07172 385 aa3.8□□□□□ -1.8
PDX1YGR193C ERR1P0CX10 437 aa3.8□□□□□ -1.8
PDX1YGR193C ERR2P0CX11 437 aa3.8□□□□□ -1.8
PDX1YGR193C BIK1P11709 440 aa3.8□□□□□ -1.8
PDX1YGR193C LAT1P12695 482 aaKnown RBP3.8□□□□□ -1.8
PDX1YGR193C POL3P15436 1097 aa3.8□□□□□ -1.8
PDX1YGR193C OCA4P25366 362 aa3.8□□□□□ -1.8
PDX1YGR193C DMC1P25453 334 aa3.8□□□□□ -1.8
PDX1YGR193C TPS2P31688 896 aaKnown RBP3.8□□□□□ -1.8
PDX1YGR193C SEC21P32074 935 aaKnown RBP3.8□□□□□ -1.8
PDX1YGR193C MDL1P33310 695 aa3.8□□□□□ -1.8
PDX1YGR193C OAR1P35731 278 aa3.8□□□□□ -1.8
PDX1YGR193C MOH1P38191 138 aa3.8□□□□□ -1.8
PDX1YGR193C POA1P38218 177 aa3.8□□□□□ -1.8
PDX1YGR193C YBR138CP38277 524 aa3.8□□□□□ -1.8
PDX1YGR193C STL1P39932 569 aa3.8□□□□□ -1.8
PDX1YGR193C SPF1P39986 1215 aaKnown RBP3.8□□□□□ -1.8
PDX1YGR193C NOP16P40007 231 aaKnown RBP3.8□□□□□ -1.8
PDX1YGR193C GPP2P40106 250 aaKnown RBP3.8□□□□□ -1.8
PDX1YGR193C PHB1P40961 287 aa3.8□□□□□ -1.8
PDX1YGR193C ARF3P40994 183 aaRIP-Chip data3.8□□□□□ -1.8not detected
PDX1YGR193C CHA4P43634 648 aa3.8□□□□□ -1.8
PDX1YGR193C POL31P46957 487 aa3.8□□□□□ -1.8
PDX1YGR193C MAD3P47074 515 aa3.8□□□□□ -1.8
PDX1YGR193C MIG2P53035 382 aa3.8□□□□□ -1.8
PDX1YGR193C MTC3P53077 123 aa3.8□□□□□ -1.8
PDX1YGR193C NCS6P53088 359 aa3.8□□□□□ -1.8
PDX1YGR193C TYW3P53177 273 aa3.8□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms