RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeastyeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT1YFL038C MIG2P53035 382 aa6.7□□□□□ -1.34
YPT1YFL038C NUT1P53114 1132 aa6.7□□□□□ -1.34
YPT1YFL038C ERP6P53198 216 aa6.7□□□□□ -1.34
YPT1YFL038C RCF2P53721 224 aa6.7□□□□□ -1.34
YPT1YFL038C ALG11P53954 548 aaKnown RBP6.7□□□□□ -1.34
YPT1YFL038C CUS1Q02554 436 aaPredicted RBP6.7□□□□□ -1.34
YPT1YFL038C LGE1Q02796 332 aaKnown RBP6.7□□□□□ -1.34
YPT1YFL038C JIP4Q03361 876 aa6.7□□□□□ -1.34
YPT1YFL038C MSC2Q03455 724 aa6.7□□□□□ -1.34
YPT1YFL038C DOT1Q04089 582 aaKnown RBP6.7□□□□□ -1.34
YPT1YFL038C CDD1Q06549 142 aa6.7□□□□□ -1.34
YPT1YFL038C MDM38Q08179 573 aa6.7□□□□□ -1.34
YPT1YFL038C THI21Q08975 551 aa6.7□□□□□ -1.34
YPT1YFL038C CTF3Q12748 733 aa6.7□□□□□ -1.34
YPT1YFL038C IZH4Q99393 312 aa6.7□□□□□ -1.34
YPT1YFL038C LAA1P39526 2014 aa6.7□□□□□ -1.34
YPT1YFL038C MOT1P32333 1867 aa6.69□□□□□ -1.34
YPT1YFL038C SSA1P10591 642 aaKnown RBP6.69□□□□□ -1.34
YPT1YFL038C SEC14P24280 304 aaKnown RBP6.69□□□□□ -1.34
YPT1YFL038C OXP1P28273 1286 aa6.69□□□□□ -1.34
YPT1YFL038C SIN4P32259 974 aa6.69□□□□□ -1.34
YPT1YFL038C MSS51P32335 436 aa6.69□□□□□ -1.34
YPT1YFL038C SEC6P32844 805 aa6.69□□□□□ -1.34
YPT1YFL038C AGP2P38090 596 aa6.69□□□□□ -1.34
YPT1YFL038C SSP120P39931 234 aaKnown RBP6.69□□□□□ -1.34
YPT1YFL038C RPT2P40327 437 aaKnown RBP6.69□□□□□ -1.34
YPT1YFL038C SPR3P41901 512 aa6.69□□□□□ -1.34
YPT1YFL038C SAD1P43589 448 aa6.69□□□□□ -1.34
YPT1YFL038C YGR283CP53336 341 aaPredicted RBP6.69□□□□□ -1.34
YPT1YFL038C NOP13P53883 403 aaKnown RBP RIP-Chip data6.69□□□□□ -1.34not detected
YPT1YFL038C TEP1P53916 434 aa6.69□□□□□ -1.34
YPT1YFL038C NMA111P53920 997 aa6.69□□□□□ -1.34
YPT1YFL038C YNL058CP53947 316 aa6.69□□□□□ -1.34
YPT1YFL038C CWC21Q03375 135 aaKnown RBP6.69□□□□□ -1.34
YPT1YFL038C SNU56Q03782 492 aaKnown RBP6.69□□□□□ -1.34
YPT1YFL038C YDL073WQ07454 984 aa6.69□□□□□ -1.34
YPT1YFL038C ATG11Q12527 1178 aa6.69□□□□□ -1.34
YPT1YFL038C HVG1P0CE11 249 aa6.68□□□□□ -1.34
YPT1YFL038C GCD2P12754 651 aaPredicted RBP6.68□□□□□ -1.34
YPT1YFL038C KEX2P13134 814 aa6.68□□□□□ -1.34
YPT1YFL038C ADE2P21264 571 aaKnown RBP6.68□□□□□ -1.34
YPT1YFL038C REC107P21651 314 aa6.68□□□□□ -1.34
YPT1YFL038C MRM1P25270 412 aa6.68□□□□□ -1.34
YPT1YFL038C NPP1P25353 742 aa6.68□□□□□ -1.34
YPT1YFL038C SPS22P25380 463 aa6.68□□□□□ -1.34
YPT1YFL038C URA10P30402 227 aa6.68□□□□□ -1.34
YPT1YFL038C HXT3P32466 567 aaKnown RBP6.68□□□□□ -1.34
YPT1YFL038C FRE1P32791 686 aa6.68□□□□□ -1.34
YPT1YFL038C ASH1P34233 588 aa6.68□□□□□ -1.34
YPT1YFL038C RIM2P38127 377 aa6.68□□□□□ -1.34
YPT1YFL038C MAP2P38174 421 aaKnown RBP6.68□□□□□ -1.34
YPT1YFL038C TSC10P38342 320 aa6.68□□□□□ -1.34
YPT1YFL038C BSD2P38356 321 aa6.68□□□□□ -1.34
YPT1YFL038C YAP1801P38856 637 aa6.68□□□□□ -1.34
YPT1YFL038C AIM18P38884 321 aa6.68□□□□□ -1.34
YPT1YFL038C STN1P38960 494 aa6.68□□□□□ -1.34
YPT1YFL038C AVT2P39981 480 aa6.68□□□□□ -1.34
YPT1YFL038C PEP8P40335 379 aa6.68□□□□□ -1.34
YPT1YFL038C JEM1P40358 645 aa6.68□□□□□ -1.34
YPT1YFL038C ARC1P46672 376 aaKnown RBP6.68□□□□□ -1.34
YPT1YFL038C POL31P46957 487 aa6.68□□□□□ -1.34
YPT1YFL038C IML2P47031 731 aa6.68□□□□□ -1.34
YPT1YFL038C USE1P53146 245 aa6.68□□□□□ -1.34
YPT1YFL038C RKM2Q03942 479 aa6.68□□□□□ -1.34
YPT1YFL038C SND1Q04007 877 aa6.68□□□□□ -1.34
YPT1YFL038C HFD1Q04458 532 aa6.68□□□□□ -1.34
YPT1YFL038C MET7Q08645 548 aa6.68□□□□□ -1.34
YPT1YFL038C APC5Q08683 685 aa6.68□□□□□ -1.34
YPT1YFL038C AI5_ALPHAQ9ZZX1 630 aa6.68□□□□□ -1.34
YPT1YFL038C ERR1P0CX10 437 aa6.67□□□□□ -1.34
YPT1YFL038C ERR2P0CX11 437 aa6.67□□□□□ -1.34
YPT1YFL038C SNA3P14359 133 aa6.67□□□□□ -1.34
YPT1YFL038C MRPS28P21771 286 aa6.67□□□□□ -1.34
YPT1YFL038C CYS3P31373 394 aaKnown RBP6.67□□□□□ -1.34
YPT1YFL038C KES1P35844 434 aaKnown RBP6.67□□□□□ -1.34
YPT1YFL038C GPT2P36148 743 aa6.67□□□□□ -1.34
YPT1YFL038C CTP1P38152 299 aa6.67□□□□□ -1.34
YPT1YFL038C HSL7P38274 827 aa6.67□□□□□ -1.34
YPT1YFL038C PPX1P38698 397 aa6.67□□□□□ -1.34
YPT1YFL038C RLP7P40693 322 aaKnown RBP6.67□□□□□ -1.34
YPT1YFL038C ERR3P42222 437 aa6.67□□□□□ -1.34
YPT1YFL038C FAR3P46671 204 aa6.67□□□□□ -1.34
YPT1YFL038C PFD1P46988 109 aa6.67□□□□□ -1.34
YPT1YFL038C RNR4P49723 345 aaKnown RBP6.67□□□□□ -1.34
YPT1YFL038C MRM2P53123 320 aa6.67□□□□□ -1.34
YPT1YFL038C SLG1P54867 378 aa6.67□□□□□ -1.34
YPT1YFL038C BET4Q00618 327 aa6.67□□□□□ -1.34
YPT1YFL038C TIF35Q04067 274 aaKnown RBP6.67□□□□□ -1.34
YPT1YFL038C ADY3Q07732 790 aa6.67□□□□□ -1.34
YPT1YFL038C THI20Q08224 551 aa6.67□□□□□ -1.34
YPT1YFL038C RRP36Q12481 300 aaPredicted RBP6.67□□□□□ -1.34
YPT1YFL038C KCS1Q12494 1050 aa6.67□□□□□ -1.34
YPT1YFL038C HSP60P19882 572 aaKnown RBP6.66□□□□□ -1.34
YPT1YFL038C CLB4P24871 460 aa6.66□□□□□ -1.34
YPT1YFL038C GID7P25569 745 aa6.66□□□□□ -1.34
YPT1YFL038C YSC84P32793 468 aa6.66□□□□□ -1.34
YPT1YFL038C TFC3P34111 1160 aa6.66□□□□□ -1.34
YPT1YFL038C SIP2P34164 415 aaKnown RBP6.66□□□□□ -1.34
YPT1YFL038C RDH54P38086 958 aa6.66□□□□□ -1.34
YPT1YFL038C TBS1P38114 1094 aa6.66□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 303.6 ms