RNA–Protein interactions for RNA: YER087C-B

SBH1, Transcript of Beta subunit of Sec61p ER translocation complex (Sec61p-Sss1p-Sbh1p), yeastyeast

Gene SBH1, Length 249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SBH1YER087C-B HSP60P19882 572 aaKnown RBP0.71□□□□□ -2.3
SBH1YER087C-B YHR020WP38708 688 aaKnown RBP0.71□□□□□ -2.3
SBH1YER087C-B NMD2P38798 1089 aaKnown RBP0.71□□□□□ -2.3
SBH1YER087C-B HUL4P40985 892 aa0.71□□□□□ -2.3
SBH1YER087C-B OSW7P43611 510 aa0.71□□□□□ -2.3
SBH1YER087C-B HUL5P53119 910 aa0.71□□□□□ -2.3
SBH1YER087C-B ERP6P53198 216 aa0.71□□□□□ -2.3
SBH1YER087C-B DOS2P54858 310 aa0.71□□□□□ -2.3
SBH1YER087C-B BET4Q00618 327 aa0.71□□□□□ -2.3
SBH1YER087C-B WAR1Q03631 944 aa0.71□□□□□ -2.3
SBH1YER087C-B TAF8Q03750 510 aa0.71□□□□□ -2.3
SBH1YER087C-B FPR4Q06205 392 aaPredicted RBP0.71□□□□□ -2.3
SBH1YER087C-B FLC1Q08967 793 aa0.71□□□□□ -2.3
SBH1YER087C-B YTA7P40340 1379 aa0.7□□□□□ -2.3
SBH1YER087C-B CAN1P04817 590 aa0.7□□□□□ -2.3
SBH1YER087C-B CIT2P08679 460 aa0.7□□□□□ -2.3
SBH1YER087C-B RAD4P14736 754 aa0.7□□□□□ -2.3
SBH1YER087C-B CNE1P27825 502 aa0.7□□□□□ -2.3
SBH1YER087C-B SWH1P35845 1188 aa0.7□□□□□ -2.3
SBH1YER087C-B RRP14P36080 434 aaKnown RBP0.7□□□□□ -2.3
SBH1YER087C-B MNN1P39106 762 aa0.7□□□□□ -2.3
SBH1YER087C-B GDH3P39708 457 aa0.7□□□□□ -2.3
SBH1YER087C-B CAF16P43569 289 aa0.7□□□□□ -2.3
SBH1YER087C-B NPY1P53164 384 aa0.7□□□□□ -2.3
SBH1YER087C-B YGR125WP53273 1036 aa0.7□□□□□ -2.3
SBH1YER087C-B BUD17P53727 317 aa0.7□□□□□ -2.3
SBH1YER087C-B CRZ1P53968 678 aa0.7□□□□□ -2.3
SBH1YER087C-B ATP25Q03153 612 aa0.7□□□□□ -2.3
SBH1YER087C-B UGO1Q03327 502 aa0.7□□□□□ -2.3
SBH1YER087C-B UTP14Q04500 899 aaKnown RBP0.7□□□□□ -2.3
SBH1YER087C-B COG8Q04632 607 aa0.7□□□□□ -2.3
SBH1YER087C-B ISA1Q07821 250 aaPredicted RBP0.7□□□□□ -2.3
SBH1YER087C-B YPL216WQ08964 1102 aa0.7□□□□□ -2.3
SBH1YER087C-B OSH2Q12451 1283 aa0.7□□□□□ -2.3
SBH1YER087C-B YOR131CQ12486 218 aa0.7□□□□□ -2.3
SBH1YER087C-B MDM12Q92328 271 aa0.7□□□□□ -2.3
SBH1YER087C-B GAL11P19659 1081 aa0.69□□□□□ -2.3
SBH1YER087C-B ARE1P25628 610 aa0.69□□□□□ -2.3
SBH1YER087C-B CPR3P25719 182 aa0.69□□□□□ -2.3
SBH1YER087C-B MSH2P25847 964 aa0.69□□□□□ -2.3
SBH1YER087C-B MTC2P34246 357 aa0.69□□□□□ -2.3
SBH1YER087C-B BET3P36149 193 aa0.69□□□□□ -2.3
SBH1YER087C-B PBP2P38151 413 aaKnown RBP RIP-Chip data0.69□□□□□ -2.3not detected
SBH1YER087C-B TMN3P40071 706 aa0.69□□□□□ -2.3
SBH1YER087C-B NUP82P40368 713 aa0.69□□□□□ -2.3
SBH1YER087C-B ALG2P43636 503 aa0.69□□□□□ -2.3
SBH1YER087C-B TIM54P47045 478 aa0.69□□□□□ -2.3
SBH1YER087C-B RTA1P53047 317 aa0.69□□□□□ -2.3
SBH1YER087C-B MAL11P53048 616 aa0.69□□□□□ -2.3
SBH1YER087C-B YGL081WP53156 320 aa0.69□□□□□ -2.3
SBH1YER087C-B RNH70P53331 553 aa0.69□□□□□ -2.3
SBH1YER087C-B SND1Q04007 877 aa0.69□□□□□ -2.3
SBH1YER087C-B POB3Q04636 552 aaKnown RBP0.69□□□□□ -2.3
SBH1YER087C-B GFD1Q04839 188 aaKnown RBP0.69□□□□□ -2.3
SBH1YER087C-B HRD3Q05787 833 aa0.69□□□□□ -2.3
SBH1YER087C-B YDL124WQ07551 312 aaKnown RBP0.69□□□□□ -2.3
SBH1YER087C-B PFA4Q12006 378 aa0.69□□□□□ -2.3
SBH1YER087C-B CDC53Q12018 815 aaKnown RBP0.69□□□□□ -2.3
SBH1YER087C-B YLR125WQ12138 136 aa0.69□□□□□ -2.3
SBH1YER087C-B CDC9P04819 755 aa0.68□□□□□ -2.3
SBH1YER087C-B TOM70P07213 617 aaKnown RBP0.68□□□□□ -2.3
SBH1YER087C-B PHO8P11491 566 aa0.68□□□□□ -2.3
SBH1YER087C-B PCL2P25693 308 aa0.68□□□□□ -2.3
SBH1YER087C-B YKL091CP33324 310 aaKnown RBP0.68□□□□□ -2.3
SBH1YER087C-B STO1P34160 861 aaKnown RBP0.68□□□□□ -2.3
SBH1YER087C-B YKR051WP36142 418 aa0.68□□□□□ -2.3
SBH1YER087C-B MTC6P38849 526 aa0.68□□□□□ -2.3
SBH1YER087C-B FPR3P38911 411 aaKnown RBP0.68□□□□□ -2.3
SBH1YER087C-B TDA10P42938 290 aa0.68□□□□□ -2.3
SBH1YER087C-B ALG12P53730 551 aa0.68□□□□□ -2.3
SBH1YER087C-B SNP1Q00916 300 aaPredicted RBP0.68□□□□□ -2.3
SBH1YER087C-B FMP42Q04991 504 aa0.68□□□□□ -2.3
SBH1YER087C-B GIN4Q12263 1142 aa0.68□□□□□ -2.3
SBH1YER087C-B NOP14Q99207 810 aaKnown RBP0.68□□□□□ -2.3
SBH1YER087C-B ERR1P0CX10 437 aa0.67□□□□□ -2.3
SBH1YER087C-B ERR2P0CX11 437 aa0.67□□□□□ -2.3
SBH1YER087C-B RPL8AP17076 256 aaKnown RBP0.67□□□□□ -2.3
SBH1YER087C-B GSY1P23337 708 aa0.67□□□□□ -2.3
SBH1YER087C-B THI4P32318 326 aa0.67□□□□□ -2.3
SBH1YER087C-B HOG1P32485 435 aa0.67□□□□□ -2.3
SBH1YER087C-B YPT7P32939 208 aa0.67□□□□□ -2.3
SBH1YER087C-B MCD4P36051 919 aa0.67□□□□□ -2.3
SBH1YER087C-B YKR018CP36114 725 aa0.67□□□□□ -2.3
SBH1YER087C-B AVT5P38176 459 aa0.67□□□□□ -2.3
SBH1YER087C-B APN2P38207 520 aa0.67□□□□□ -2.3
SBH1YER087C-B PCM1P38628 557 aaKnown RBP0.67□□□□□ -2.3
SBH1YER087C-B IMD2P38697 523 aaKnown RBP0.67□□□□□ -2.3
SBH1YER087C-B RPN10P38886 268 aaKnown RBP0.67□□□□□ -2.3
SBH1YER087C-B MGS1P40151 587 aa0.67□□□□□ -2.3
SBH1YER087C-B YPT11P48559 417 aa0.67□□□□□ -2.3
SBH1YER087C-B IMD3P50095 523 aaKnown RBP0.67□□□□□ -2.3
SBH1YER087C-B MET13P53128 600 aa0.67□□□□□ -2.3
SBH1YER087C-B YNR029CP53729 429 aaKnown RBP0.67□□□□□ -2.3
SBH1YER087C-B YNL193WP53870 558 aa0.67□□□□□ -2.3
SBH1YER087C-B DNM1P54861 757 aa0.67□□□□□ -2.3
SBH1YER087C-B ARP4P80428 489 aa0.67□□□□□ -2.3
SBH1YER087C-B NHX1Q04121 633 aa0.67□□□□□ -2.3
SBH1YER087C-B ECM22Q05958 814 aaPredicted RBP0.67□□□□□ -2.3
SBH1YER087C-B ATG33Q06485 197 aa0.67□□□□□ -2.3
SBH1YER087C-B YLR001CQ07895 862 aa0.67□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms