RNA–Protein interactions for RNA: YDR392W

SPT3, Transcript of Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, yeastyeast

Gene SPT3, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT3YDR392W MSL5Q12186 476 aaKnown RBP RIP-Chip data5.45□□□□□ -1.54not detected
SPT3YDR392W CIT2P08679 460 aa5.44□□□□□ -1.54
SPT3YDR392W MTF1P14908 341 aaKnown RBP5.44□□□□□ -1.54
SPT3YDR392W PPH22P23595 377 aa5.44□□□□□ -1.54
SPT3YDR392W CDC20P26309 610 aa5.44□□□□□ -1.54
SPT3YDR392W EFT1P32324 842 aaKnown RBP5.44□□□□□ -1.54
SPT3YDR392W MNR2P35724 969 aa5.44□□□□□ -1.54
SPT3YDR392W PFS1P38872 237 aa5.44□□□□□ -1.54
SPT3YDR392W TDA7P53882 636 aaPredicted RBP5.44□□□□□ -1.54
SPT3YDR392W MRD1Q06106 887 aaKnown RBP5.44□□□□□ -1.54
SPT3YDR392W GPB1Q08886 897 aa5.44□□□□□ -1.54
SPT3YDR392W PUS9Q12069 462 aa5.44□□□□□ -1.54
SPT3YDR392W ADE4P04046 510 aaKnown RBP5.43□□□□□ -1.54
SPT3YDR392W SPO11P23179 398 aa5.43□□□□□ -1.54
SPT3YDR392W LYP1P32487 611 aa5.43□□□□□ -1.54
SPT3YDR392W RML2P32611 393 aa5.43□□□□□ -1.54
SPT3YDR392W AAP1P37898 856 aaKnown RBP5.43□□□□□ -1.54
SPT3YDR392W TIF34P40217 347 aaKnown RBP5.43□□□□□ -1.54
SPT3YDR392W RPN8Q08723 338 aaKnown RBP5.43□□□□□ -1.54
SPT3YDR392W SVS1Q12254 260 aa5.43□□□□□ -1.54
SPT3YDR392W RKM5Q12367 367 aa5.43□□□□□ -1.54
SPT3YDR392W TAD3Q9URQ3 322 aa5.43□□□□□ -1.54
SPT3YDR392W COX3P00420 269 aa5.42□□□□□ -1.54
SPT3YDR392W RAD2P07276 1031 aa5.42□□□□□ -1.54
SPT3YDR392W SYP1P25623 870 aaKnown RBP5.42□□□□□ -1.54
SPT3YDR392W RPN10P38886 268 aaKnown RBP5.42□□□□□ -1.54
SPT3YDR392W ALR2P43553 858 aa5.42□□□□□ -1.54
SPT3YDR392W NOP8Q08287 484 aaPredicted RBP5.42□□□□□ -1.54
SPT3YDR392W TMS1Q12116 473 aa5.42□□□□□ -1.54
SPT3YDR392W APM4Q99186 491 aa5.42□□□□□ -1.54
SPT3YDR392W SES1P07284 462 aaKnown RBP5.41□□□□□ -1.54
SPT3YDR392W YER152CP10356 443 aa5.41□□□□□ -1.54
SPT3YDR392W KIN3P22209 435 aa5.41□□□□□ -1.54
SPT3YDR392W PRD1P25375 712 aa5.41□□□□□ -1.54
SPT3YDR392W ATG15P25641 520 aa5.41□□□□□ -1.54
SPT3YDR392W APL1P27351 700 aa5.41□□□□□ -1.54
SPT3YDR392W BEM1P29366 551 aa5.41□□□□□ -1.54
SPT3YDR392W SLD2P34252 453 aa5.41□□□□□ -1.54
SPT3YDR392W CNN1P43618 361 aa5.41□□□□□ -1.54
SPT3YDR392W IRC8P47046 822 aa5.41□□□□□ -1.54
SPT3YDR392W MSE1P48525 536 aa5.41□□□□□ -1.54
SPT3YDR392W UTP8P53276 713 aaKnown RBP5.41□□□□□ -1.54
SPT3YDR392W SUN4P53616 420 aa5.41□□□□□ -1.54
SPT3YDR392W BNA5Q05979 453 aa5.41□□□□□ -1.54
SPT3YDR392W VTS1Q08831 523 aaKnown RBP RIP-Chip data5.41□□□□□ -1.54not detected
SPT3YDR392W ADE3P07245 946 aaKnown RBP5.4□□□□□ -1.54
SPT3YDR392W NUC1P08466 329 aa5.4□□□□□ -1.54
SPT3YDR392W MLS1P30952 554 aa5.4□□□□□ -1.54
SPT3YDR392W LST4P34239 828 aa5.4□□□□□ -1.54
SPT3YDR392W YCG1Q06680 1035 aa5.4□□□□□ -1.54
SPT3YDR392W TLG2Q08144 397 aa5.4□□□□□ -1.54
SPT3YDR392W YPQ1Q12010 308 aa5.4□□□□□ -1.54
SPT3YDR392W FRE7Q12333 620 aa5.4□□□□□ -1.54
SPT3YDR392W CDC6P09119 513 aa5.39□□□□□ -1.55
SPT3YDR392W GLN3P18494 730 aa5.39□□□□□ -1.55
SPT3YDR392W DBP5P20449 482 aaKnown RBP5.39□□□□□ -1.55
SPT3YDR392W HXT13P39924 564 aa5.39□□□□□ -1.55
SPT3YDR392W BTT1P40314 149 aaPredicted RBP5.39□□□□□ -1.55
SPT3YDR392W SET2P46995 733 aaKnown RBP5.39□□□□□ -1.55
SPT3YDR392W COQ5P49017 307 aa5.39□□□□□ -1.55
SPT3YDR392W HXT17P53631 564 aa5.39□□□□□ -1.55
SPT3YDR392W HXT15P54854 567 aa5.39□□□□□ -1.55
SPT3YDR392W SIZ1Q04195 904 aa5.39□□□□□ -1.55
SPT3YDR392W IOC4Q04213 475 aa5.39□□□□□ -1.55
SPT3YDR392W DSE3Q08729 430 aa5.39□□□□□ -1.55
SPT3YDR392W LEA1Q08963 238 aaPredicted RBP5.39□□□□□ -1.55
SPT3YDR392W CYC8P14922 966 aa5.38□□□□□ -1.55
SPT3YDR392W DAL5P15365 543 aa5.38□□□□□ -1.55
SPT3YDR392W PRO3P32263 286 aaKnown RBP5.38□□□□□ -1.55
SPT3YDR392W MGS1P40151 587 aa5.38□□□□□ -1.55
SPT3YDR392W YFL054CP43549 646 aa5.38□□□□□ -1.55
SPT3YDR392W TMA10Q06177 86 aa5.38□□□□□ -1.55
SPT3YDR392W MRL1Q06815 381 aa5.38□□□□□ -1.55
SPT3YDR392W RAD3P06839 778 aa5.37□□□□□ -1.55
SPT3YDR392W LDB16P25587 256 aa5.37□□□□□ -1.55
SPT3YDR392W RAD24P32641 659 aa5.37□□□□□ -1.55
SPT3YDR392W YBR284WP38150 797 aa5.37□□□□□ -1.55
SPT3YDR392W RPS26AP39938 119 aaKnown RBP5.37□□□□□ -1.55
SPT3YDR392W RPS26BP39939 119 aaKnown RBP5.37□□□□□ -1.55
SPT3YDR392W SAH1P39954 449 aaKnown RBP5.37□□□□□ -1.55
SPT3YDR392W ASG7P46993 209 aa5.37□□□□□ -1.55
SPT3YDR392W HLJ1P48353 224 aa5.37□□□□□ -1.55
SPT3YDR392W GNP1P48813 663 aa5.37□□□□□ -1.55
SPT3YDR392W RPN4Q03465 531 aa5.37□□□□□ -1.55
SPT3YDR392W BSP1Q06604 576 aa5.37□□□□□ -1.55
SPT3YDR392W NTO1Q12311 748 aa5.37□□□□□ -1.55
SPT3YDR392W RIB2Q12362 591 aaKnown RBP5.37□□□□□ -1.55
SPT3YDR392W SEC39Q12745 709 aa5.37□□□□□ -1.55
SPT3YDR392W GCR1P07261 785 aa5.36□□□□□ -1.55
SPT3YDR392W RAD16P31244 790 aa5.36□□□□□ -1.55
SPT3YDR392W MGE1P38523 228 aa5.36□□□□□ -1.55
SPT3YDR392W ERG10P41338 398 aaKnown RBP5.36□□□□□ -1.55
SPT3YDR392W ZPR1P53303 486 aaKnown RBP5.36□□□□□ -1.55
SPT3YDR392W SEG1Q04279 960 aa5.36□□□□□ -1.55
SPT3YDR392W YLR224WQ05947 369 aa5.36□□□□□ -1.55
SPT3YDR392W CTF3Q12748 733 aa5.36□□□□□ -1.55
SPT3YDR392W MSF1P08425 469 aa5.35□□□□□ -1.55
SPT3YDR392W REV1P12689 985 aa5.35□□□□□ -1.55
SPT3YDR392W BAS1P22035 811 aa5.35□□□□□ -1.55
SPT3YDR392W PWP2P25635 923 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 117.8 ms