RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 FDX2Q6P4F2 183 aa9.63□□□□□ -0.87
RFC1-217ENST00000639695 FAM177BA6PVY3 158 aa9.62□□□□□ -0.87
RFC1-217ENST00000639695 SOX1O00570 391 aaPredicted RBP9.62□□□□□ -0.87
RFC1-217ENST00000639695 GIPC1O14908 333 aa9.62□□□□□ -0.87
RFC1-217ENST00000639695 EIF4BP23588 611 aaKnown RBP9.62□□□□□ -0.87
RFC1-217ENST00000639695 MAP4P27816 1152 aaKnown RBP9.62□□□□□ -0.87
RFC1-217ENST00000639695 ORC1Q13415 861 aa9.62□□□□□ -0.87
RFC1-217ENST00000639695 XKR5Q6UX68 686 aa9.62□□□□□ -0.87
RFC1-217ENST00000639695 PRKAG2Q9UGJ0 569 aa9.62□□□□□ -0.87
RFC1-217ENST00000639695 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.62□□□□□ -0.87
RFC1-217ENST00000639695 MEGF11A6BM72 1044 aa9.61□□□□□ -0.87
RFC1-217ENST00000639695 F13BP05160 661 aa9.61□□□□□ -0.87
RFC1-217ENST00000639695 YBX3P16989 372 aaKnown RBP eCLIP9.61□□□□□ -0.87
RFC1-217ENST00000639695 ATP2B1P20020 1258 aa9.61□□□□□ -0.87
RFC1-217ENST00000639695 C19orf57Q0VDD7 668 aa9.61□□□□□ -0.87
RFC1-217ENST00000639695 VN1R5Q7Z5H4 357 aa9.61□□□□□ -0.87
RFC1-217ENST00000639695 ABI1Q8IZP0 508 aa9.61□□□□□ -0.87
RFC1-217ENST00000639695 HIF3AQ9Y2N7 669 aa9.61□□□□□ -0.87
RFC1-217ENST00000639695 NFXL1Q6ZNB6 911 aa9.6□□□□□ -0.87
RFC1-217ENST00000639695 FBXL6Q8N531 539 aa9.6□□□□□ -0.87
RFC1-217ENST00000639695 TMEM102Q8N9M5 508 aaPredicted RBP9.6□□□□□ -0.87
RFC1-217ENST00000639695 NXPE3Q969Y0 559 aa9.6□□□□□ -0.87
RFC1-217ENST00000639695 SPATA32Q96LK8 384 aa9.6□□□□□ -0.87
RFC1-217ENST00000639695 ZKSCAN3Q9BRR0 538 aa9.6□□□□□ -0.87
RFC1-217ENST00000639695 TINF2Q9BSI4 451 aa9.6□□□□□ -0.87
RFC1-217ENST00000639695 TMPRSS13Q9BYE2 586 aa9.6□□□□□ -0.87
RFC1-217ENST00000639695 PIM2Q9P1W9 311 aa9.6□□□□□ -0.87
RFC1-217ENST00000639695 GAS2O43903 313 aaKnown RBP9.59□□□□□ -0.87
RFC1-217ENST00000639695 SMARCA5O60264 1052 aaPredicted RBP9.59□□□□□ -0.87
RFC1-217ENST00000639695 TIAF1O95411 115 aa9.59□□□□□ -0.87
RFC1-217ENST00000639695 MSMPQ1L6U9 139 aa9.59□□□□□ -0.87
RFC1-217ENST00000639695 ZNF654Q8IZM8 581 aa9.59□□□□□ -0.87
RFC1-217ENST00000639695 LOC100289279A0A1B0GTE1 492 aa9.58□□□□□ -0.88
RFC1-217ENST00000639695 EREGO14944 169 aa9.58□□□□□ -0.88
RFC1-217ENST00000639695 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.58□□□□□ -0.88
RFC1-217ENST00000639695 VPS37DQ86XT2 251 aa9.58□□□□□ -0.88
RFC1-217ENST00000639695 OSMRQ99650 979 aa9.58□□□□□ -0.88
RFC1-217ENST00000639695 USP26Q9BXU7 913 aa9.58□□□□□ -0.88
RFC1-217ENST00000639695 ACBD3Q9H3P7 528 aa9.58□□□□□ -0.88
RFC1-217ENST00000639695 DRD2P14416 443 aa9.57□□□□□ -0.88
RFC1-217ENST00000639695 HS2ST1Q7LGA3 356 aa9.57□□□□□ -0.88
RFC1-217ENST00000639695 INPP5FQ9Y2H2 1132 aa9.57□□□□□ -0.88
RFC1-217ENST00000639695 CTSHP09668 335 aa9.56□□□□□ -0.88
RFC1-217ENST00000639695 RXRBP28702 533 aa9.56□□□□□ -0.88
RFC1-217ENST00000639695 NUTM2GQ5VZR2 741 aa9.56□□□□□ -0.88
RFC1-217ENST00000639695 CDPF1Q6NVV7 123 aa9.56□□□□□ -0.88
RFC1-217ENST00000639695 DPH6Q7L8W6 267 aa9.56□□□□□ -0.88
RFC1-217ENST00000639695 C12orf50Q8NA57 414 aaPredicted RBP9.56□□□□□ -0.88
RFC1-217ENST00000639695 SMG8Q8ND04 991 aaKnown RBP9.56□□□□□ -0.88
RFC1-217ENST00000639695 BSNDQ8WZ55 320 aa9.56□□□□□ -0.88
RFC1-217ENST00000639695 ARMC5Q96C12 935 aa9.56□□□□□ -0.88
RFC1-217ENST00000639695 LATS2Q9NRM7 1088 aa9.56□□□□□ -0.88
RFC1-217ENST00000639695 DDX41Q9UJV9 622 aaKnown RBP9.56□□□□□ -0.88
RFC1-217ENST00000639695 GTF2F1P35269 517 aaKnown RBP eCLIP9.55□□□□□ -0.88
RFC1-217ENST00000639695 ADMP35318 185 aa9.55□□□□□ -0.88
RFC1-217ENST00000639695 ARID5AQ03989 594 aa9.55□□□□□ -0.88
RFC1-217ENST00000639695 IKBKEQ14164 716 aa9.55□□□□□ -0.88
RFC1-217ENST00000639695 SNX29Q8TEQ0 813 aa9.55□□□□□ -0.88
RFC1-217ENST00000639695 FBLIM1Q8WUP2 373 aa9.55□□□□□ -0.88
RFC1-217ENST00000639695 CCDC74AQ96AQ1 378 aa9.55□□□□□ -0.88
RFC1-217ENST00000639695 C12orf49Q9H741 205 aa9.55□□□□□ -0.88
RFC1-217ENST00000639695 ATG3Q9NT62 314 aa9.55□□□□□ -0.88
RFC1-217ENST00000639695 LEMD3Q9Y2U8 911 aa9.55□□□□□ -0.88
RFC1-217ENST00000639695 TNFRSF21O75509 655 aa9.54□□□□□ -0.88
RFC1-217ENST00000639695 CDK11BP21127 795 aaKnown RBP9.54□□□□□ -0.88
RFC1-217ENST00000639695 DNAJA1P31689 397 aaKnown RBP9.54□□□□□ -0.88
RFC1-217ENST00000639695 ARL4DP49703 201 aa9.54□□□□□ -0.88
RFC1-217ENST00000639695 USP48Q86UV5 1035 aa9.54□□□□□ -0.88
RFC1-217ENST00000639695 GMLQ99445 158 aa9.54□□□□□ -0.88
RFC1-217ENST00000639695 SUGCTQ9HAC7 445 aa9.54□□□□□ -0.88
RFC1-217ENST00000639695 CCDC39Q9UFE4 941 aa9.54□□□□□ -0.88
RFC1-217ENST00000639695 GGT7Q9UJ14 662 aa9.54□□□□□ -0.88
RFC1-217ENST00000639695 FOXD3Q9UJU5 478 aaPredicted RBP9.54□□□□□ -0.88
RFC1-217ENST00000639695 CDK11AQ9UQ88 783 aaPredicted RBP9.54□□□□□ -0.88
RFC1-217ENST00000639695 USP31Q70CQ4 1352 aa9.53□□□□□ -0.88
RFC1-217ENST00000639695 FOSL1P15407 271 aa9.53□□□□□ -0.88
RFC1-217ENST00000639695 TAF1CQ15572 869 aaPredicted RBP9.53□□□□□ -0.88
RFC1-217ENST00000639695 C2CD4AQ8NCU7 369 aaPredicted RBP9.53□□□□□ -0.88
RFC1-217ENST00000639695 DNAJC2Q99543 621 aaKnown RBP9.53□□□□□ -0.88
RFC1-217ENST00000639695 OSBPL1AQ9BXW6 950 aa9.53□□□□□ -0.88
RFC1-217ENST00000639695 SRCIN1Q9C0H9 1055 aa9.53□□□□□ -0.88
RFC1-217ENST00000639695 FAM8A1Q9UBU6 413 aa9.53□□□□□ -0.88
RFC1-217ENST00000639695 ARID1BQ8NFD5 2236 aaPredicted RBP9.52□□□□□ -0.88
RFC1-217ENST00000639695 METTL12A8MUP2 240 aa9.52□□□□□ -0.89
RFC1-217ENST00000639695 PHACTR2O75167 634 aa9.52□□□□□ -0.89
RFC1-217ENST00000639695 ESRRAP11474 423 aaPredicted RBP9.52□□□□□ -0.89
RFC1-217ENST00000639695 TNNI2P48788 182 aa9.52□□□□□ -0.89
RFC1-217ENST00000639695 PTPN12Q05209 780 aaKnown RBP9.52□□□□□ -0.89
RFC1-217ENST00000639695 NFKBIBQ15653 356 aa9.52□□□□□ -0.89
RFC1-217ENST00000639695 SOGA3Q5TF21 947 aa9.52□□□□□ -0.89
RFC1-217ENST00000639695 PEAR1Q5VY43 1037 aaPredicted RBP9.52□□□□□ -0.89
RFC1-217ENST00000639695 NOP9Q86U38 636 aaKnown RBP9.52□□□□□ -0.89
RFC1-217ENST00000639695 DHX38Q92620 1227 aaKnown RBP9.52□□□□□ -0.89
RFC1-217ENST00000639695 ZFYVE28Q9HCC9 887 aa9.52□□□□□ -0.89
RFC1-217ENST00000639695 FAM95CA0A1B0GW59 222 aa9.51□□□□□ -0.89
RFC1-217ENST00000639695 ZNF394Q53GI3 561 aa9.51□□□□□ -0.89
RFC1-217ENST00000639695 ASAP3Q8TDY4 903 aa9.51□□□□□ -0.89
RFC1-217ENST00000639695 EPS8L3Q8TE67 593 aaKnown RBP9.51□□□□□ -0.89
RFC1-217ENST00000639695 NRSN2Q9GZP1 204 aa9.51□□□□□ -0.89
RFC1-217ENST00000639695 PPP4R2Q9NY27 417 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms