RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 TIMM10P62072 90 aa10.3□□□□□ -0.76
VPS11-206ENST00000614944 SARNPP82979 210 aaKnown RBP10.3□□□□□ -0.76
VPS11-206ENST00000614944 SWT1Q5T5J6 900 aaKnown RBP10.3□□□□□ -0.76
VPS11-206ENST00000614944 SMIM5Q71RC9 77 aa10.3□□□□□ -0.76
VPS11-206ENST00000614944 GOLGA6L1Q8N7Z2 621 aa10.3□□□□□ -0.76
VPS11-206ENST00000614944 RPGRQ92834 1020 aaKnown RBP10.3□□□□□ -0.76
VPS11-206ENST00000614944 CELF1Q92879 486 aaKnown RBP10.3□□□□□ -0.76
VPS11-206ENST00000614944 SNX21Q969T3 373 aa10.3□□□□□ -0.76
VPS11-206ENST00000614944 NRDCO43847 1150 aa10.29□□□□□ -0.76
VPS11-206ENST00000614944 ATP2B4P23634 1241 aa10.29□□□□□ -0.76
VPS11-206ENST00000614944 SKOR2Q2VWA4 1001 aaPredicted RBP10.29□□□□□ -0.76
VPS11-206ENST00000614944 RPAINQ86UA6 219 aa10.29□□□□□ -0.76
VPS11-206ENST00000614944 ANKRD7Q92527 254 aa10.29□□□□□ -0.76
VPS11-206ENST00000614944 MASTLQ96GX5 879 aa10.29□□□□□ -0.76
VPS11-206ENST00000614944 IPO7O95373 1038 aaKnown RBP10.29□□□□□ -0.76
VPS11-206ENST00000614944 CCDC102BQ68D86 513 aa10.29□□□□□ -0.76
VPS11-206ENST00000614944 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.29□□□□□ -0.762e-6■■■■■ 92.6
VPS11-206ENST00000614944 RPAP1Q9BWH6 1393 aaPredicted RBP10.29□□□□□ -0.76
VPS11-206ENST00000614944 ZMYM6O95789 1325 aa10.29□□□□□ -0.76
VPS11-206ENST00000614944 CTAGE5O15320 804 aa10.29□□□□□ -0.76
VPS11-206ENST00000614944 FOXD4L6Q3SYB3 417 aaPredicted RBP10.29□□□□□ -0.76
VPS11-206ENST00000614944 FOXD4L3Q6VB84 417 aaPredicted RBP10.29□□□□□ -0.76
VPS11-206ENST00000614944 RILPL2Q969X0 211 aa10.29□□□□□ -0.76
VPS11-206ENST00000614944 GNL3LQ9NVN8 582 aaKnown RBP10.29□□□□□ -0.76
VPS11-206ENST00000614944 CHMP5Q9NZZ3 219 aa10.29□□□□□ -0.76
VPS11-206ENST00000614944 CACNA1SQ13698 1873 aa10.29□□□□□ -0.76
VPS11-206ENST00000614944 MMP10P09238 476 aa10.28□□□□□ -0.76
VPS11-206ENST00000614944 GYS2P54840 703 aa10.28□□□□□ -0.76
VPS11-206ENST00000614944 KIAA2012Q0VF49 1180 aa10.28□□□□□ -0.76
VPS11-206ENST00000614944 TSGA10IPQ3SY00 556 aa10.28□□□□□ -0.76
VPS11-206ENST00000614944 ZMYM1Q5SVZ6 1142 aa10.28□□□□□ -0.76
VPS11-206ENST00000614944 NEUROD6Q96NK8 337 aa10.28□□□□□ -0.76
VPS11-206ENST00000614944 LSG1Q9H089 658 aaKnown RBP10.28□□□□□ -0.76
VPS11-206ENST00000614944 DIAPH3Q9NSV4 1193 aa10.28□□□□□ -0.76
VPS11-206ENST00000614944 CCDC39Q9UFE4 941 aa10.28□□□□□ -0.76
VPS11-206ENST00000614944 TIAM2Q8IVF5 1701 aa10.28□□□□□ -0.76
VPS11-206ENST00000614944 ADORA1P30542 326 aa10.28□□□□□ -0.76
VPS11-206ENST00000614944 TRDNQ13061 729 aa10.28□□□□□ -0.76
VPS11-206ENST00000614944 UBE3CQ15386 1083 aa10.28□□□□□ -0.76
VPS11-206ENST00000614944 C11orf91Q3C1V1 193 aa10.28□□□□□ -0.76
VPS11-206ENST00000614944 TSHZ3Q63HK5 1081 aa10.28□□□□□ -0.76
VPS11-206ENST00000614944 BOLA2Q9H3K6 86 aa10.28□□□□□ -0.76
VPS11-206ENST00000614944 ATP6V0A2Q9Y487 856 aa10.28□□□□□ -0.76
VPS11-206ENST00000614944 RPS6KL1Q9Y6S9 549 aa10.28□□□□□ -0.76
VPS11-206ENST00000614944 FAM177BA6PVY3 158 aa10.28□□□□□ -0.76
VPS11-206ENST00000614944 FAM177A1Q8N128 213 aaPredicted RBP10.28□□□□□ -0.76
VPS11-206ENST00000614944 NUCKS1Q9H1E3 243 aaKnown RBP10.28□□□□□ -0.76
VPS11-206ENST00000614944 DENND2AQ9ULE3 1009 aa10.28□□□□□ -0.76
VPS11-206ENST00000614944 TPM3P06753 285 aa10.27□□□□□ -0.77
VPS11-206ENST00000614944 HSPA4P34932 840 aa10.27□□□□□ -0.77
VPS11-206ENST00000614944 GSCP56915 257 aaPredicted RBP10.27□□□□□ -0.77
VPS11-206ENST00000614944 TSPAN18Q96SJ8 248 aa10.27□□□□□ -0.77
VPS11-206ENST00000614944 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.27□□□□□ -0.77
VPS11-206ENST00000614944 VPS33BQ9H267 617 aa10.27□□□□□ -0.77
VPS11-206ENST00000614944 RNF113AO15541 343 aaKnown RBP10.27□□□□□ -0.77
VPS11-206ENST00000614944 MCAMP43121 646 aa10.27□□□□□ -0.77
VPS11-206ENST00000614944 CAVIN4Q5BKX8 364 aa10.27□□□□□ -0.77
VPS11-206ENST00000614944 GORABQ5T7V8 394 aa10.27□□□□□ -0.77
VPS11-206ENST00000614944 KIF2CQ99661 725 aa10.27□□□□□ -0.77
VPS11-206ENST00000614944 FSD1Q9BTV5 496 aa10.27□□□□□ -0.77
VPS11-206ENST00000614944 RTFDC1Q9BY42 306 aaPredicted RBP10.27□□□□□ -0.77
VPS11-206ENST00000614944 DDX41Q9UJV9 622 aaKnown RBP10.27□□□□□ -0.77
VPS11-206ENST00000614944 GOLGA6L22H0YM25 854 aa10.26□□□□□ -0.77
VPS11-206ENST00000614944 CCT2P78371 535 aaKnown RBP10.26□□□□□ -0.77
VPS11-206ENST00000614944 RABEP1Q15276 862 aa10.26□□□□□ -0.77
VPS11-206ENST00000614944 PDLIM2Q96JY6 352 aa10.26□□□□□ -0.77
VPS11-206ENST00000614944 CCDC85AQ96PX6 553 aaPredicted RBP10.26□□□□□ -0.77
VPS11-206ENST00000614944 DSCC1Q9BVC3 393 aa10.26□□□□□ -0.77
VPS11-206ENST00000614944 MORC2Q9Y6X9 1032 aaPredicted RBP10.26□□□□□ -0.77
VPS11-206ENST00000614944 MYO5AQ9Y4I1 1855 aaKnown RBP10.26□□□□□ -0.77
VPS11-206ENST00000614944 COQ9O75208 318 aa10.26□□□□□ -0.77
VPS11-206ENST00000614944 ATP2B1P20020 1258 aa10.26□□□□□ -0.77
VPS11-206ENST00000614944 SART3Q15020 963 aaKnown RBP10.26□□□□□ -0.77
VPS11-206ENST00000614944 SETDB1Q15047 1291 aa10.26□□□□□ -0.77
VPS11-206ENST00000614944 MCMDC2Q4G0Z9 681 aa10.26□□□□□ -0.77
VPS11-206ENST00000614944 C10orf67Q8IYJ2 551 aa10.26□□□□□ -0.77
VPS11-206ENST00000614944 SPATA5Q8NB90 893 aa10.26□□□□□ -0.77
VPS11-206ENST00000614944 MAP4K1Q92918 833 aa10.26□□□□□ -0.77
VPS11-206ENST00000614944 CCDC97Q96F63 343 aaPredicted RBP10.26□□□□□ -0.77
VPS11-206ENST00000614944 ARFGEF1Q9Y6D6 1849 aa10.26□□□□□ -0.77
VPS11-206ENST00000614944 COL1A1P02452 1464 aaPredicted RBP10.26□□□□□ -0.77
VPS11-206ENST00000614944 RBM5P52756 815 aaKnown RBP eCLIP10.26□□□□□ -0.77
VPS11-206ENST00000614944 KRT222Q8N1A0 295 aa10.26□□□□□ -0.77
VPS11-206ENST00000614944 UPF1Q92900 1129 aaKnown RBP eCLIP10.26□□□□□ -0.77
VPS11-206ENST00000614944 TM6SF1Q9BZW5 370 aa10.26□□□□□ -0.77
VPS11-206ENST00000614944 HMG20BQ9P0W2 317 aa10.26□□□□□ -0.77
VPS11-206ENST00000614944 DDX49Q9Y6V7 483 aaKnown RBP10.26□□□□□ -0.77
VPS11-206ENST00000614944 CCDC171Q6TFL3 1326 aa10.26□□□□□ -0.77
VPS11-206ENST00000614944 PPEF1O14829 653 aaPredicted RBP10.25□□□□□ -0.77
VPS11-206ENST00000614944 IL1R1P14778 569 aa10.25□□□□□ -0.77
VPS11-206ENST00000614944 ADD2P35612 726 aa10.25□□□□□ -0.77
VPS11-206ENST00000614944 FAM184AQ8NB25 1140 aa10.25□□□□□ -0.77
VPS11-206ENST00000614944 APPBP2Q92624 585 aa10.25□□□□□ -0.77
VPS11-206ENST00000614944 CNKSR1Q969H4 720 aa10.25□□□□□ -0.77
VPS11-206ENST00000614944 FAM84BQ96KN1 310 aaPredicted RBP10.25□□□□□ -0.77
VPS11-206ENST00000614944 ALDH8A1Q9H2A2 487 aaPredicted RBP10.25□□□□□ -0.77
VPS11-206ENST00000614944 FOCADQ5VW36 1801 aa10.25□□□□□ -0.77
VPS11-206ENST00000614944 NPHP1O15259 732 aa10.25□□□□□ -0.77
VPS11-206ENST00000614944 PHKA1P46020 1223 aa10.25□□□□□ -0.77
VPS11-206ENST00000614944 FKBP1AP62942 108 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms