RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 FBXL6Q8N531 539 aa5.1□□□□□ -1.59
HMGB1P50-201ENST00000605814 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P50-201ENST00000605814 STK32AQ8WU08 396 aa5.1□□□□□ -1.59
HMGB1P50-201ENST00000605814 NUDT16Q96DE0 195 aaKnown RBP5.1□□□□□ -1.59
HMGB1P50-201ENST00000605814 TRIM44Q96DX7 344 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P50-201ENST00000605814 MFSD14AQ96MC6 490 aa5.1□□□□□ -1.59
HMGB1P50-201ENST00000605814 FMNL2Q96PY5 1086 aa5.1□□□□□ -1.59
HMGB1P50-201ENST00000605814 MPHOSPH9Q99550 1183 aa5.1□□□□□ -1.59
HMGB1P50-201ENST00000605814 OSBPL1AQ9BXW6 950 aa5.1□□□□□ -1.59
HMGB1P50-201ENST00000605814 ELP3Q9H9T3 547 aa5.1□□□□□ -1.59
HMGB1P50-201ENST00000605814 OSGEPQ9NPF4 335 aa5.1□□□□□ -1.59
HMGB1P50-201ENST00000605814 MAPK8IP3Q9UPT6 1336 aa5.1□□□□□ -1.59
HMGB1P50-201ENST00000605814 LEMD3Q9Y2U8 911 aa5.1□□□□□ -1.59
HMGB1P50-201ENST00000605814 BCORL1Q5H9F3 1711 aa5.09□□□□□ -1.59
HMGB1P50-201ENST00000605814 GAPVD1Q14C86 1478 aa5.09□□□□□ -1.59
HMGB1P50-201ENST00000605814 BLMP54132 1417 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P50-201ENST00000605814 ARHGAP31Q2M1Z3 1444 aa5.09□□□□□ -1.59
HMGB1P50-201ENST00000605814 UHRF1BP1Q6BDS2 1440 aa5.09□□□□□ -1.59
HMGB1P50-201ENST00000605814 TNFRSF10BO14763 440 aa5.09□□□□□ -1.59
HMGB1P50-201ENST00000605814 ADAM11O75078 769 aa5.09□□□□□ -1.59
HMGB1P50-201ENST00000605814 LETM1O95202 739 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P50-201ENST00000605814 TNNT2P45379 298 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P50-201ENST00000605814 ELOAQ14241 798 aaKnown RBP5.09□□□□□ -1.59
HMGB1P50-201ENST00000605814 CLEC17AQ6ZS10 378 aa5.09□□□□□ -1.59
HMGB1P50-201ENST00000605814 NGEFQ8N5V2 710 aa5.09□□□□□ -1.59
HMGB1P50-201ENST00000605814 C12orf50Q8NA57 414 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P50-201ENST00000605814 IPO4Q8TEX9 1081 aaKnown RBP5.09□□□□□ -1.59
HMGB1P50-201ENST00000605814 POP1Q99575 1024 aaKnown RBP5.09□□□□□ -1.59
HMGB1P50-201ENST00000605814 USP26Q9BXU7 913 aa5.09□□□□□ -1.59
HMGB1P50-201ENST00000605814 CYP4F12Q9HCS2 524 aa5.09□□□□□ -1.59
HMGB1P50-201ENST00000605814 PIM2Q9P1W9 311 aa5.09□□□□□ -1.59
HMGB1P50-201ENST00000605814 ZMIZ1Q9ULJ6 1067 aa5.09□□□□□ -1.59
HMGB1P50-201ENST00000605814 E9PCH4 1651 aa5.08□□□□□ -1.6
HMGB1P50-201ENST00000605814 CTTNBP2Q8WZ74 1663 aa5.08□□□□□ -1.6
HMGB1P50-201ENST00000605814 ARHGEF11O15085 1522 aa5.08□□□□□ -1.6
HMGB1P50-201ENST00000605814 ROCK1Q13464 1354 aa5.08□□□□□ -1.6
HMGB1P50-201ENST00000605814 PARD3Q8TEW0 1356 aa5.08□□□□□ -1.6
HMGB1P50-201ENST00000605814 PDE2AO00408 941 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P50-201ENST00000605814 ZSCAN20P17040 1043 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P50-201ENST00000605814 MAP4P27816 1152 aaKnown RBP5.08□□□□□ -1.6
HMGB1P50-201ENST00000605814 DDIT3P35638 169 aa5.08□□□□□ -1.6
HMGB1P50-201ENST00000605814 RANGAP1P46060 587 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P50-201ENST00000605814 USP11P51784 963 aa5.08□□□□□ -1.6
HMGB1P50-201ENST00000605814 DNM1Q05193 864 aaKnown RBP5.08□□□□□ -1.6
HMGB1P50-201ENST00000605814 C19orf57Q0VDD7 668 aa5.08□□□□□ -1.6
HMGB1P50-201ENST00000605814 TRMT2AQ8IZ69 625 aaKnown RBP5.08□□□□□ -1.6
HMGB1P50-201ENST00000605814 CEP120Q8N960 986 aa5.08□□□□□ -1.6
HMGB1P50-201ENST00000605814 TBC1D32Q96NH3 1257 aa5.08□□□□□ -1.6
HMGB1P50-201ENST00000605814 CCDC94Q9BW85 323 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P50-201ENST00000605814 YIPF2Q9BWQ6 316 aa5.08□□□□□ -1.6
HMGB1P50-201ENST00000605814 PANK2Q9BZ23 570 aa5.08□□□□□ -1.6
HMGB1P50-201ENST00000605814 ADAM19Q9H013 955 aa5.08□□□□□ -1.6
HMGB1P50-201ENST00000605814 TMEM63CQ9P1W3 806 aa5.08□□□□□ -1.6
HMGB1P50-201ENST00000605814 THOC2Q8NI27 1593 aaKnown RBP5.08□□□□□ -1.6
HMGB1P50-201ENST00000605814 NLRP1Q9C000 1473 aa5.07□□□□□ -1.6
HMGB1P50-201ENST00000605814 MBD5Q9P267 1494 aa5.07□□□□□ -1.6
HMGB1P50-201ENST00000605814 ATAD2BQ9ULI0 1458 aa5.07□□□□□ -1.6
HMGB1P50-201ENST00000605814 UNC13AQ9UPW8 1703 aa5.07□□□□□ -1.6
HMGB1P50-201ENST00000605814 A0A0U1RQG5 324 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P50-201ENST00000605814 PRR19A6NJB7 356 aa5.07□□□□□ -1.6
HMGB1P50-201ENST00000605814 RBM25P49756 843 aaKnown RBP5.07□□□□□ -1.6
HMGB1P50-201ENST00000605814 IKBKEQ14164 716 aa5.07□□□□□ -1.6
HMGB1P50-201ENST00000605814 PDE3AQ14432 1141 aa5.07□□□□□ -1.6
HMGB1P50-201ENST00000605814 FAM26DQ5JW98 314 aa5.07□□□□□ -1.6
HMGB1P50-201ENST00000605814 PAOXQ6QHF9 649 aa5.07□□□□□ -1.6
HMGB1P50-201ENST00000605814 CAPN12Q6ZSI9 719 aa5.07□□□□□ -1.6
HMGB1P50-201ENST00000605814 TP53INP2Q8IXH6 220 aa5.07□□□□□ -1.6
HMGB1P50-201ENST00000605814 PMEPA1Q969W9 287 aa5.07□□□□□ -1.6
HMGB1P50-201ENST00000605814 NOL7Q9UMY1 257 aaKnown RBP5.07□□□□□ -1.6
HMGB1P50-201ENST00000605814 PCF11O94913 1555 aaKnown RBP5.07□□□□□ -1.6
HMGB1P50-201ENST00000605814 KDM5CP41229 1560 aa5.07□□□□□ -1.6
HMGB1P50-201ENST00000605814 CARMIL1Q5VZK9 1371 aa5.06□□□□□ -1.6
HMGB1P50-201ENST00000605814 NINLQ9Y2I6 1382 aa5.06□□□□□ -1.6
HMGB1P50-201ENST00000605814 ZNF521Q96K83 1311 aa5.06□□□□□ -1.6
HMGB1P50-201ENST00000605814 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P50-201ENST00000605814 CANXP27824 592 aaKnown RBP5.06□□□□□ -1.6
HMGB1P50-201ENST00000605814 SLC20A2Q08357 652 aa5.06□□□□□ -1.6
HMGB1P50-201ENST00000605814 CNGB1Q14028 1251 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P50-201ENST00000605814 SGO2Q562F6 1265 aa5.06□□□□□ -1.6
HMGB1P50-201ENST00000605814 TMEM164Q5U3C3 297 aa5.06□□□□□ -1.6
HMGB1P50-201ENST00000605814 ATCAYQ86WG3 371 aa5.06□□□□□ -1.6
HMGB1P50-201ENST00000605814 ASAP3Q8TDY4 903 aa5.06□□□□□ -1.6
HMGB1P50-201ENST00000605814 EDEM1Q92611 657 aa5.06□□□□□ -1.6
HMGB1P50-201ENST00000605814 SNX21Q969T3 373 aa5.06□□□□□ -1.6
HMGB1P50-201ENST00000605814 PDLIM2Q96JY6 352 aa5.06□□□□□ -1.6
HMGB1P50-201ENST00000605814 METTL22Q9BUU2 404 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P50-201ENST00000605814 UPF2Q9HAU5 1272 aaKnown RBP5.06□□□□□ -1.6
HMGB1P50-201ENST00000605814 TMEM51Q9NW97 253 aa5.06□□□□□ -1.6
HMGB1P50-201ENST00000605814 NAP1L2Q9ULW6 460 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P50-201ENST00000605814 CLASP1Q7Z460 1538 aa5.06□□□□□ -1.6
HMGB1P50-201ENST00000605814 SUPT6HQ7KZ85 1726 aaKnown RBP5.06□□□□□ -1.6
HMGB1P50-201ENST00000605814 NCOA3Q9Y6Q9 1424 aa5.06□□□□□ -1.6
HMGB1P50-201ENST00000605814 CGNL1Q0VF96 1302 aa5.05□□□□□ -1.6
HMGB1P50-201ENST00000605814 FAM95CA0A1B0GW59 222 aa5.05□□□□□ -1.6
HMGB1P50-201ENST00000605814 ZBTB39O15060 712 aa5.05□□□□□ -1.6
HMGB1P50-201ENST00000605814 ADAMTS4O75173 837 aa5.05□□□□□ -1.6
HMGB1P50-201ENST00000605814 HSP90AB1P08238 724 aaKnown RBP5.05□□□□□ -1.6
HMGB1P50-201ENST00000605814 ACPPP15309 386 aa5.05□□□□□ -1.6
HMGB1P50-201ENST00000605814 ATP2B4P23634 1241 aa5.05□□□□□ -1.6
HMGB1P50-201ENST00000605814 GTF2F1P35269 517 aaKnown RBP eCLIP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms