RNA–Protein interactions for RNA: ENST00000597777.1

FARP1-222, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

Gene FARP1, Length 3,841 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-222	ENST00000597777	GPIHBP1	Q8IV16	184 aa		11.45	□□□□□ -0.58
FARP1-222	ENST00000597777	MYL10	Q9BUA6	226 aa		11.45	□□□□□ -0.58
FARP1-222	ENST00000597777	KIF13B	Q9NQT8	1826 aa		11.45	□□□□□ -0.58
FARP1-222	ENST00000597777	SPDYE4	A6NLX3	237 aa		11.45	□□□□□ -0.58
FARP1-222	ENST00000597777	LARGE1	O95461	756 aa		11.45	□□□□□ -0.58
FARP1-222	ENST00000597777	MIGA1	Q8NAN2	632 aa		11.45	□□□□□ -0.58
FARP1-222	ENST00000597777	LRP2BP	Q9P2M1	347 aa		11.45	□□□□□ -0.58
FARP1-222	ENST00000597777	SNX14	Q9Y5W7	946 aa		11.45	□□□□□ -0.58
FARP1-222	ENST00000597777		A0A0D9SFI3	127 aa		11.45	□□□□□ -0.58
FARP1-222	ENST00000597777	LRRFIP1	Q32MZ4	808 aa	Known RBP	11.45	□□□□□ -0.58
FARP1-222	ENST00000597777	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	11.45	□□□□□ -0.58
FARP1-222	ENST00000597777	TRMT1L	Q7Z2T5	733 aa	Known RBP	11.45	□□□□□ -0.58
FARP1-222	ENST00000597777	PPP1R9B	Q96SB3	815 aa		11.45	□□□□□ -0.58
FARP1-222	ENST00000597777	PAG1	Q9NWQ8	432 aa		11.45	□□□□□ -0.58
FARP1-222	ENST00000597777	RAI14	Q9P0K7	980 aa		11.45	□□□□□ -0.58
FARP1-222	ENST00000597777	MYH7	P12883	1935 aa		11.45	□□□□□ -0.58
FARP1-222	ENST00000597777	NPR1	P16066	1061 aa		11.44	□□□□□ -0.58
FARP1-222	ENST00000597777	TDO2	P48775	406 aa		11.44	□□□□□ -0.58
FARP1-222	ENST00000597777	KBTBD3	Q8NAB2	608 aa		11.44	□□□□□ -0.58
FARP1-222	ENST00000597777	FTO	Q9C0B1	505 aa	Known RBP eCLIP	11.44	□□□□□ -0.58
FARP1-222	ENST00000597777	ZNF804B	A4D1E1	1349 aa		11.44	□□□□□ -0.58
FARP1-222	ENST00000597777	FAM170A	A1A519	330 aa		11.44	□□□□□ -0.58
FARP1-222	ENST00000597777		G3V3G9	751 aa		11.44	□□□□□ -0.58
FARP1-222	ENST00000597777	DCAF8	Q5TAQ9	597 aa		11.44	□□□□□ -0.58
FARP1-222	ENST00000597777	CREB3L3	Q68CJ9	461 aa		11.44	□□□□□ -0.58
FARP1-222	ENST00000597777	GPT2	Q8TD30	523 aa		11.44	□□□□□ -0.58
FARP1-222	ENST00000597777	UIMC1	Q96RL1	719 aa		11.44	□□□□□ -0.58
FARP1-222	ENST00000597777	DNAJC25	Q9H1X3	360 aa		11.44	□□□□□ -0.58
FARP1-222	ENST00000597777	PDS5A	Q29RF7	1337 aa	Known RBP	11.44	□□□□□ -0.58
FARP1-222	ENST00000597777	C10orf71	Q711Q0	1435 aa		11.44	□□□□□ -0.58
FARP1-222	ENST00000597777	NRDC	O43847	1150 aa		11.44	□□□□□ -0.58
FARP1-222	ENST00000597777	CCDC192	P0DO97	292 aa		11.44	□□□□□ -0.58
FARP1-222	ENST00000597777	TTF1	Q15361	905 aa	Predicted RBP	11.44	□□□□□ -0.58
FARP1-222	ENST00000597777	CCDC102B	Q68D86	513 aa		11.44	□□□□□ -0.58
FARP1-222	ENST00000597777	ZNF771	Q7L3S4	317 aa	Predicted RBP	11.44	□□□□□ -0.58
FARP1-222	ENST00000597777	KLHL34	Q8N239	644 aa		11.44	□□□□□ -0.58
FARP1-222	ENST00000597777	LEMD3	Q9Y2U8	911 aa		11.44	□□□□□ -0.58
FARP1-222	ENST00000597777	DUOX1	Q9NRD9	1551 aa		11.44	□□□□□ -0.58
FARP1-222	ENST00000597777	GOLGA8B	A8MQT2	603 aa		11.43	□□□□□ -0.58
FARP1-222	ENST00000597777	SGSM2	O43147	1006 aa		11.43	□□□□□ -0.58
FARP1-222	ENST00000597777	TAF5L	O75529	589 aa		11.43	□□□□□ -0.58
FARP1-222	ENST00000597777	C15orf52	Q6ZUT6	534 aa	Known RBP	11.43	□□□□□ -0.58
FARP1-222	ENST00000597777	CMTR1	Q8N1G2	835 aa	Known RBP	11.43	□□□□□ -0.58
FARP1-222	ENST00000597777	ZSCAN22	P10073	491 aa	Predicted RBP	11.43	□□□□□ -0.58
FARP1-222	ENST00000597777	SRGN	P10124	158 aa		11.43	□□□□□ -0.58
FARP1-222	ENST00000597777	SPECC1	Q5M775	1068 aa		11.43	□□□□□ -0.58
FARP1-222	ENST00000597777	CPLX2	Q6PUV4	134 aa	Known RBP	11.43	□□□□□ -0.58
FARP1-222	ENST00000597777	NEK1	Q96PY6	1258 aa		11.43	□□□□□ -0.58
FARP1-222	ENST00000597777	LMBRD1	Q9NUN5	540 aa		11.43	□□□□□ -0.58
FARP1-222	ENST00000597777	CCDC39	Q9UFE4	941 aa		11.43	□□□□□ -0.58
FARP1-222	ENST00000597777	XDH	P47989	1333 aa		11.43	□□□□□ -0.58
FARP1-222	ENST00000597777	ALDH1B1	P30837	517 aa		11.43	□□□□□ -0.58
FARP1-222	ENST00000597777	PDCL3	Q9H2J4	239 aa		11.43	□□□□□ -0.58
FARP1-222	ENST00000597777	KIF3A	Q9Y496	699 aa		11.43	□□□□□ -0.58
FARP1-222	ENST00000597777	SEMA3E	O15041	775 aa		11.42	□□□□□ -0.58
FARP1-222	ENST00000597777	CBX1	P83916	185 aa		11.42	□□□□□ -0.58
FARP1-222	ENST00000597777	STYK1	Q6J9G0	422 aa		11.42	□□□□□ -0.58
FARP1-222	ENST00000597777	CDC37L1	Q7L3B6	337 aa		11.42	□□□□□ -0.58
FARP1-222	ENST00000597777	MASTL	Q96GX5	879 aa		11.42	□□□□□ -0.58
FARP1-222	ENST00000597777	GJB4	Q9NTQ9	266 aa		11.42	□□□□□ -0.58
FARP1-222	ENST00000597777	MYH13	Q9UKX3	1938 aa		11.42	□□□□□ -0.58
FARP1-222	ENST00000597777	MARCH6	O60337	910 aa		11.42	□□□□□ -0.58
FARP1-222	ENST00000597777	ZFY	P08048	801 aa	Predicted RBP	11.42	□□□□□ -0.58
FARP1-222	ENST00000597777	TNNT3	P45378	269 aa	Predicted RBP	11.42	□□□□□ -0.58
FARP1-222	ENST00000597777	GNL3L	Q9NVN8	582 aa	Known RBP	11.42	□□□□□ -0.58
FARP1-222	ENST00000597777	IRS2	Q9Y4H2	1338 aa		11.42	□□□□□ -0.58
FARP1-222	ENST00000597777	MCAM	P43121	646 aa		11.42	□□□□□ -0.58
FARP1-222	ENST00000597777	MAP3K11	Q16584	847 aa		11.42	□□□□□ -0.58
FARP1-222	ENST00000597777	MSL1	Q68DK7	614 aa		11.42	□□□□□ -0.58
FARP1-222	ENST00000597777	CPLX3	Q8WVH0	158 aa		11.42	□□□□□ -0.58
FARP1-222	ENST00000597777	AIDA	Q96BJ3	306 aa		11.42	□□□□□ -0.58
FARP1-222	ENST00000597777	IL17RA	Q96F46	866 aa		11.42	□□□□□ -0.58
FARP1-222	ENST00000597777	GPHN	Q9NQX3	736 aa	Predicted RBP	11.42	□□□□□ -0.58
FARP1-222	ENST00000597777	MED23	Q9ULK4	1368 aa		11.41	□□□□□ -0.58
FARP1-222	ENST00000597777	PDC	P20941	246 aa		11.41	□□□□□ -0.58
FARP1-222	ENST00000597777	CAVIN4	Q5BKX8	364 aa		11.41	□□□□□ -0.58
FARP1-222	ENST00000597777	SP8	Q8IXZ3	490 aa		11.41	□□□□□ -0.58
FARP1-222	ENST00000597777	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
FARP1-222	ENST00000597777	PRDM1	O75626	825 aa		11.41	□□□□□ -0.58
FARP1-222	ENST00000597777	PHKA1	P46020	1223 aa		11.41	□□□□□ -0.58
FARP1-222	ENST00000597777	MAST2	Q6P0Q8	1798 aa		11.41	□□□□□ -0.58
FARP1-222	ENST00000597777	ZSCAN25	Q6NSZ9	544 aa		11.41	□□□□□ -0.58
FARP1-222	ENST00000597777	FBXO33	Q7Z6M2	555 aa		11.41	□□□□□ -0.58
FARP1-222	ENST00000597777	ZNF589	Q86UQ0	364 aa	Predicted RBP	11.41	□□□□□ -0.58
FARP1-222	ENST00000597777	HELLS	Q9NRZ9	838 aa		11.41	□□□□□ -0.58
FARP1-222	ENST00000597777	ERICH2	A1L162	156 aa		11.4	□□□□□ -0.58
FARP1-222	ENST00000597777	PPEF1	O14829	653 aa	Predicted RBP	11.4	□□□□□ -0.58
FARP1-222	ENST00000597777	RANBP6	O60518	1105 aa	Known RBP	11.4	□□□□□ -0.58
FARP1-222	ENST00000597777	OFD1	O75665	1012 aa		11.4	□□□□□ -0.58
FARP1-222	ENST00000597777	ATP2B4	P23634	1241 aa		11.4	□□□□□ -0.58
FARP1-222	ENST00000597777	ME3	Q16798	604 aa		11.4	□□□□□ -0.58
FARP1-222	ENST00000597777	TMED8	Q6PL24	325 aa	Predicted RBP	11.4	□□□□□ -0.58
FARP1-222	ENST00000597777	CLEC17A	Q6ZS10	378 aa		11.4	□□□□□ -0.58
FARP1-222	ENST00000597777	FSIP1	Q8NA03	581 aa		11.4	□□□□□ -0.58
FARP1-222	ENST00000597777	PCMTD1	Q96MG8	357 aa	Predicted RBP	11.4	□□□□□ -0.58
FARP1-222	ENST00000597777	KLF18	A0A0U1RQI7	1052 aa		11.4	□□□□□ -0.58
FARP1-222	ENST00000597777	ANO6	Q4KMQ2	910 aa		11.4	□□□□□ -0.58
FARP1-222	ENST00000597777	SPATA5	Q8NB90	893 aa		11.4	□□□□□ -0.58
FARP1-222	ENST00000597777	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	11.4	□□□□□ -0.58
FARP1-222	ENST00000597777	ZSWIM4	Q9H7M6	989 aa		11.4	□□□□□ -0.58

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