RNA–Protein interactions for RNA: ENST00000593977.1

LINC00649-204, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 640 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-204ENST00000593977 POLD1P28340 1107 aa5.5□□□□□ -1.53
LINC00649-204ENST00000593977 CTCFP49711 727 aaPredicted RBP5.5□□□□□ -1.53
LINC00649-204ENST00000593977 AMPD3Q01432 767 aa5.5□□□□□ -1.53
LINC00649-204ENST00000593977 CENPCQ03188 943 aa5.5□□□□□ -1.53
LINC00649-204ENST00000593977 DGKZQ13574 1117 aa5.5□□□□□ -1.53
LINC00649-204ENST00000593977 FAM26DQ5JW98 314 aa5.5□□□□□ -1.53
LINC00649-204ENST00000593977 C1orf53Q5VUE5 145 aa5.5□□□□□ -1.53
LINC00649-204ENST00000593977 PPARGC1BQ86YN6 1023 aaKnown RBP5.5□□□□□ -1.53
LINC00649-204ENST00000593977 TTC16Q8NEE8 873 aa5.5□□□□□ -1.53
LINC00649-204ENST00000593977 SLC16A10Q8TF71 515 aa5.5□□□□□ -1.53
LINC00649-204ENST00000593977 ZDHHC1Q8WTX9 485 aa5.5□□□□□ -1.53
LINC00649-204ENST00000593977 EDEM1Q92611 657 aa5.5□□□□□ -1.53
LINC00649-204ENST00000593977 CSRNP1Q96S65 589 aa5.5□□□□□ -1.53
LINC00649-204ENST00000593977 NIFKQ9BYG3 293 aaKnown RBP5.5□□□□□ -1.53
LINC00649-204ENST00000593977 KRTAP4-6Q9BYQ5 205 aa5.5□□□□□ -1.53
LINC00649-204ENST00000593977 DNAJC25Q9H1X3 360 aa5.5□□□□□ -1.53
LINC00649-204ENST00000593977 TULP4Q9NRJ4 1543 aa5.49□□□□□ -1.53
LINC00649-204ENST00000593977 SH3BP5O60239 455 aa5.49□□□□□ -1.53
LINC00649-204ENST00000593977 GTF2E1P29083 439 aaPredicted RBP5.49□□□□□ -1.53
LINC00649-204ENST00000593977 PTGIRP43119 386 aa5.49□□□□□ -1.53
LINC00649-204ENST00000593977 HIF1AQ16665 826 aa5.49□□□□□ -1.53
LINC00649-204ENST00000593977 TSHZ1Q6ZSZ6 1077 aa5.49□□□□□ -1.53
LINC00649-204ENST00000593977 ZNF654Q8IZM8 581 aa5.49□□□□□ -1.53
LINC00649-204ENST00000593977 TMTC2Q8N394 836 aa5.49□□□□□ -1.53
LINC00649-204ENST00000593977 JDP2Q8WYK2 163 aa5.49□□□□□ -1.53
LINC00649-204ENST00000593977 CRELD1Q96HD1 420 aa5.49□□□□□ -1.53
LINC00649-204ENST00000593977 RNPC3Q96LT9 517 aaKnown RBP5.49□□□□□ -1.53
LINC00649-204ENST00000593977 NLRP3Q96P20 1036 aa5.49□□□□□ -1.53
LINC00649-204ENST00000593977 PHACTR1Q9C0D0 580 aa5.49□□□□□ -1.53
LINC00649-204ENST00000593977 KLK14Q9P0G3 267 aa5.49□□□□□ -1.53
LINC00649-204ENST00000593977 SPG7Q9UQ90 795 aa5.49□□□□□ -1.53
LINC00649-204ENST00000593977 HCN4Q9Y3Q4 1203 aa5.49□□□□□ -1.53
LINC00649-204ENST00000593977 ROBO2Q9HCK4 1378 aa5.49□□□□□ -1.53
LINC00649-204ENST00000593977 TNS3Q68CZ2 1445 aa5.48□□□□□ -1.53
LINC00649-204ENST00000593977 PRAG1Q86YV5 1406 aa5.48□□□□□ -1.53
LINC00649-204ENST00000593977 NRXN3Q9Y4C0 1643 aa5.48□□□□□ -1.53
LINC00649-204ENST00000593977 GCC2Q8IWJ2 1684 aa5.48□□□□□ -1.53
LINC00649-204ENST00000593977 PDGFRBP09619 1106 aa5.48□□□□□ -1.53
LINC00649-204ENST00000593977 LBX1P52954 281 aa5.48□□□□□ -1.53
LINC00649-204ENST00000593977 BIRC2Q13490 618 aa5.48□□□□□ -1.53
LINC00649-204ENST00000593977 SERINC3Q13530 473 aa5.48□□□□□ -1.53
LINC00649-204ENST00000593977 SH3PXD2AQ5TCZ1 1133 aa5.48□□□□□ -1.53
LINC00649-204ENST00000593977 LIAT1Q6ZQX7 453 aa5.48□□□□□ -1.53
LINC00649-204ENST00000593977 Q6ZVU0 165 aa5.48□□□□□ -1.53
LINC00649-204ENST00000593977 VPS37DQ86XT2 251 aa5.48□□□□□ -1.53
LINC00649-204ENST00000593977 KDF1Q8NAX2 398 aaPredicted RBP5.48□□□□□ -1.53
LINC00649-204ENST00000593977 MRGPRX2Q96LB1 330 aa5.48□□□□□ -1.53
LINC00649-204ENST00000593977 ZSCAN10Q96SZ4 725 aaPredicted RBP5.48□□□□□ -1.53
LINC00649-204ENST00000593977 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.48□□□□□ -1.53
LINC00649-204ENST00000593977 PNMA2Q9UL42 364 aa5.48□□□□□ -1.53
LINC00649-204ENST00000593977 AK5Q9Y6K8 562 aa5.48□□□□□ -1.53
LINC00649-204ENST00000593977 COL24A1Q17RW2 1714 aa5.48□□□□□ -1.53
LINC00649-204ENST00000593977 DUOX2Q9NRD8 1548 aa5.48□□□□□ -1.53
LINC00649-204ENST00000593977 CCDC144AA2RUR9 1427 aa5.48□□□□□ -1.53
LINC00649-204ENST00000593977 TECPR2O15040 1411 aa5.48□□□□□ -1.53
LINC00649-204ENST00000593977 KANK1Q14678 1352 aa5.47□□□□□ -1.53
LINC00649-204ENST00000593977 HMGB1P1B2RPK0 211 aaPredicted RBP5.47□□□□□ -1.53
LINC00649-204ENST00000593977 MEN1O00255 615 aa5.47□□□□□ -1.53
LINC00649-204ENST00000593977 EIF1AYO14602 144 aaKnown RBP5.47□□□□□ -1.53
LINC00649-204ENST00000593977 PRC1O43663 620 aa5.47□□□□□ -1.53
LINC00649-204ENST00000593977 CBLBQ13191 982 aa5.47□□□□□ -1.53
LINC00649-204ENST00000593977 LONRF3Q496Y0 759 aa5.47□□□□□ -1.53
LINC00649-204ENST00000593977 C4orf46Q504U0 113 aa5.47□□□□□ -1.53
LINC00649-204ENST00000593977 PLEKHG4Q58EX7 1191 aa5.47□□□□□ -1.53
LINC00649-204ENST00000593977 ZFYVE27Q5T4F4 411 aa5.47□□□□□ -1.53
LINC00649-204ENST00000593977 TREML1Q86YW5 311 aa5.47□□□□□ -1.53
LINC00649-204ENST00000593977 C16orf71Q8IYS4 520 aaPredicted RBP5.47□□□□□ -1.53
LINC00649-204ENST00000593977 RHBDD1Q8TEB9 315 aa5.47□□□□□ -1.53
LINC00649-204ENST00000593977 NUDT16Q96DE0 195 aaKnown RBP5.47□□□□□ -1.53
LINC00649-204ENST00000593977 RPS6KC1Q96S38 1066 aa5.47□□□□□ -1.53
LINC00649-204ENST00000593977 CFHR5Q9BXR6 569 aa5.47□□□□□ -1.53
LINC00649-204ENST00000593977 MAF1Q9H063 256 aa5.47□□□□□ -1.53
LINC00649-204ENST00000593977 SRA1Q9HD15 236 aaKnown RBP5.47□□□□□ -1.53
LINC00649-204ENST00000593977 COL14A1Q05707 1796 aaKnown RBP5.47□□□□□ -1.53
LINC00649-204ENST00000593977 ABCA3Q99758 1704 aa5.46□□□□□ -1.54
LINC00649-204ENST00000593977 GIPC1O14908 333 aa5.46□□□□□ -1.54
LINC00649-204ENST00000593977 PPP1R12AO14974 1030 aaPredicted RBP5.46□□□□□ -1.54
LINC00649-204ENST00000593977 CPNE3O75131 537 aaKnown RBP5.46□□□□□ -1.54
LINC00649-204ENST00000593977 CTSHP09668 335 aa5.46□□□□□ -1.54
LINC00649-204ENST00000593977 FOXD4Q12950 439 aaPredicted RBP5.46□□□□□ -1.54
LINC00649-204ENST00000593977 NNTQ13423 1086 aa5.46□□□□□ -1.54
LINC00649-204ENST00000593977 C8orf34Q49A92 452 aa5.46□□□□□ -1.54
LINC00649-204ENST00000593977 TMEM214Q6NUQ4 689 aaKnown RBP5.46□□□□□ -1.54
LINC00649-204ENST00000593977 C11orf96Q7Z7L8 435 aa5.46□□□□□ -1.54
LINC00649-204ENST00000593977 USP48Q86UV5 1035 aa5.46□□□□□ -1.54
LINC00649-204ENST00000593977 GPR152Q8TDT2 470 aa5.46□□□□□ -1.54
LINC00649-204ENST00000593977 TTF2Q9UNY4 1162 aaKnown RBP5.46□□□□□ -1.54
LINC00649-204ENST00000593977 PRKAB1Q9Y478 270 aa5.46□□□□□ -1.54
LINC00649-204ENST00000593977 PARP3Q9Y6F1 533 aa5.46□□□□□ -1.54
LINC00649-204ENST00000593977 WASF2Q9Y6W5 498 aa5.46□□□□□ -1.54
LINC00649-204ENST00000593977 PEAK1Q9H792 1746 aa5.45□□□□□ -1.54
LINC00649-204ENST00000593977 SBNO1A3KN83 1393 aa5.45□□□□□ -1.54
LINC00649-204ENST00000593977 ARHGEF10O15013 1369 aa5.45□□□□□ -1.54
LINC00649-204ENST00000593977 TGFBR3LH3BV60 316 aa5.45□□□□□ -1.54
LINC00649-204ENST00000593977 MICAL2O94851 1124 aa5.45□□□□□ -1.54
LINC00649-204ENST00000593977 ALDH1A1P00352 501 aa5.45□□□□□ -1.54
LINC00649-204ENST00000593977 ATF4P18848 351 aaPredicted RBP5.45□□□□□ -1.54
LINC00649-204ENST00000593977 EIF4BP23588 611 aaKnown RBP5.45□□□□□ -1.54
LINC00649-204ENST00000593977 GPC1P35052 558 aa5.45□□□□□ -1.54
LINC00649-204ENST00000593977 ORC1Q13415 861 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms