RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 ERO1BQ86YB8 467 aa16.46■□□□□ 0.23
APOC1-209ENST00000592885 WRNIP1Q96S55 665 aa16.46■□□□□ 0.23
APOC1-209ENST00000592885 ZNF341Q9BYN7 854 aa16.46■□□□□ 0.23
APOC1-209ENST00000592885 ZCCHC17Q9NP64 241 aaKnown RBP16.46■□□□□ 0.23
APOC1-209ENST00000592885 SNCAIPQ9Y6H5 919 aa16.46■□□□□ 0.23
APOC1-209ENST00000592885 MYH2Q9UKX2 1941 aa16.46■□□□□ 0.23
APOC1-209ENST00000592885 GNAI2P04899 355 aa16.45■□□□□ 0.22
APOC1-209ENST00000592885 SOX10P56693 466 aa16.45■□□□□ 0.22
APOC1-209ENST00000592885 MVPQ14764 893 aaKnown RBP16.45■□□□□ 0.22
APOC1-209ENST00000592885 SLF2Q8IX21 1173 aa16.45■□□□□ 0.22
APOC1-209ENST00000592885 OTUD5Q96G74 571 aa16.45■□□□□ 0.22
APOC1-209ENST00000592885 PTPN18Q99952 460 aa16.45■□□□□ 0.22
APOC1-209ENST00000592885 CCL15-CCL14A0A0B4J2E2 113 aa16.44■□□□□ 0.22
APOC1-209ENST00000592885 A0A1B0GUL7 405 aa16.44■□□□□ 0.22
APOC1-209ENST00000592885 WDHD1O75717 1129 aaPredicted RBP16.44■□□□□ 0.22
APOC1-209ENST00000592885 PPIL2Q13356 520 aa16.44■□□□□ 0.22
APOC1-209ENST00000592885 DIXDC1Q155Q3 683 aa16.44■□□□□ 0.22
APOC1-209ENST00000592885 CCL15Q16663 113 aa16.44■□□□□ 0.22
APOC1-209ENST00000592885 CDC42EP5Q6NZY7 148 aa16.44■□□□□ 0.22
APOC1-209ENST00000592885 BRI3BPQ8WY22 251 aa16.44■□□□□ 0.22
APOC1-209ENST00000592885 GAKO14976 1311 aa16.44■□□□□ 0.22
APOC1-209ENST00000592885 RBBP6Q7Z6E9 1792 aaKnown RBP16.43■□□□□ 0.22
APOC1-209ENST00000592885 AK9Q5TCS8 1911 aa16.43■□□□□ 0.22
APOC1-209ENST00000592885 RFX7Q2KHR2 1363 aa16.43■□□□□ 0.22
APOC1-209ENST00000592885 CETPP11597 493 aa16.43■□□□□ 0.22
APOC1-209ENST00000592885 ADORA1P30542 326 aa16.43■□□□□ 0.22
APOC1-209ENST00000592885 RASGRF1Q13972 1273 aa16.43■□□□□ 0.22
APOC1-209ENST00000592885 SPTY2D1Q68D10 685 aaPredicted RBP16.43■□□□□ 0.22
APOC1-209ENST00000592885 OTOP1Q7RTM1 612 aa16.43■□□□□ 0.22
APOC1-209ENST00000592885 CNKSR2Q8WXI2 1034 aa16.43■□□□□ 0.22
APOC1-209ENST00000592885 FRAT1Q92837 279 aaPredicted RBP16.43■□□□□ 0.22
APOC1-209ENST00000592885 ZFYVE28Q9HCC9 887 aa16.43■□□□□ 0.22
APOC1-209ENST00000592885 TRIM17Q9Y577 477 aa16.43■□□□□ 0.22
APOC1-209ENST00000592885 BCAR3O75815 825 aa16.42■□□□□ 0.22
APOC1-209ENST00000592885 SP3Q02447 781 aa16.42■□□□□ 0.22
APOC1-209ENST00000592885 PPATQ06203 517 aa16.42■□□□□ 0.22
APOC1-209ENST00000592885 TFCP2Q12800 502 aa16.42■□□□□ 0.22
APOC1-209ENST00000592885 SNAPC2Q13487 334 aa16.42■□□□□ 0.22
APOC1-209ENST00000592885 ARHGEF6Q15052 776 aa16.42■□□□□ 0.22
APOC1-209ENST00000592885 TAF1CQ15572 869 aaPredicted RBP16.42■□□□□ 0.22
APOC1-209ENST00000592885 NOL9Q5SY16 702 aaKnown RBP16.42■□□□□ 0.22
APOC1-209ENST00000592885 ZKSCAN2Q63HK3 967 aa16.42■□□□□ 0.22
APOC1-209ENST00000592885 DZIP1Q86YF9 867 aaKnown RBP16.42■□□□□ 0.22
APOC1-209ENST00000592885 IDI2Q9BXS1 227 aa16.42■□□□□ 0.22
APOC1-209ENST00000592885 USP40Q9NVE5 1235 aa16.42■□□□□ 0.22
APOC1-209ENST00000592885 ZNF112Q9UJU3 913 aa16.42■□□□□ 0.22
APOC1-209ENST00000592885 ENTPD3O75355 529 aa16.41■□□□□ 0.22
APOC1-209ENST00000592885 FAM163AQ96GL9 167 aaPredicted RBP16.41■□□□□ 0.22
APOC1-209ENST00000592885 XAGE2Q96GT9 111 aa16.41■□□□□ 0.22
APOC1-209ENST00000592885 FAM198AQ9UFP1 575 aa16.41■□□□□ 0.22
APOC1-209ENST00000592885 MAST2Q6P0Q8 1798 aa16.41■□□□□ 0.22
APOC1-209ENST00000592885 TIMM10P62072 90 aa16.4■□□□□ 0.22
APOC1-209ENST00000592885 NFIAQ12857 509 aa16.4■□□□□ 0.22
APOC1-209ENST00000592885 FAM43AQ8N2R8 423 aa16.4■□□□□ 0.22
APOC1-209ENST00000592885 CD99L2Q8TCZ2 262 aa16.4■□□□□ 0.22
APOC1-209ENST00000592885 ZKSCAN4Q969J2 545 aaPredicted RBP16.4■□□□□ 0.22
APOC1-209ENST00000592885 EFCC1Q9HA90 598 aa16.4■□□□□ 0.22
APOC1-209ENST00000592885 PTPN22Q9Y2R2 807 aa16.4■□□□□ 0.22
APOC1-209ENST00000592885 ATRNL1Q5VV63 1379 aa16.39■□□□□ 0.21
APOC1-209ENST00000592885 IRF6O14896 467 aa16.39■□□□□ 0.21
APOC1-209ENST00000592885 MAP4K4O95819 1239 aaPredicted RBP16.39■□□□□ 0.21
APOC1-209ENST00000592885 HNRNPUQ00839 825 aaKnown RBP eCLIP16.39■□□□□ 0.21
APOC1-209ENST00000592885 TCP10Q12799 353 aa16.39■□□□□ 0.21
APOC1-209ENST00000592885 G3BP1Q13283 466 aaKnown RBP eCLIP16.39■□□□□ 0.21
APOC1-209ENST00000592885 CLUAP1Q96AJ1 413 aa16.39■□□□□ 0.21
APOC1-209ENST00000592885 ABCF2Q9UG63 623 aa16.39■□□□□ 0.21
APOC1-209ENST00000592885 MROH7-TTC4A0A0A0MT08 1334 aa16.39■□□□□ 0.21
APOC1-209ENST00000592885 DOCK1Q14185 1865 aa16.38■□□□□ 0.21
APOC1-209ENST00000592885 COL2A1P02458 1487 aaPredicted RBP16.38■□□□□ 0.21
APOC1-209ENST00000592885 PNMA6EA0A0J9YXQ4 647 aa16.38■□□□□ 0.21
APOC1-209ENST00000592885 ARID4AP29374 1257 aaPredicted RBP16.38■□□□□ 0.21
APOC1-209ENST00000592885 INPP5BP32019 993 aa16.38■□□□□ 0.21
APOC1-209ENST00000592885 ERICH6Q7L0X2 663 aa16.38■□□□□ 0.21
APOC1-209ENST00000592885 MIGA2Q7L4E1 593 aa16.38■□□□□ 0.21
APOC1-209ENST00000592885 TMEM57Q8N5G2 664 aa16.38■□□□□ 0.21
APOC1-209ENST00000592885 KCNH4Q9UQ05 1017 aa16.38■□□□□ 0.21
APOC1-209ENST00000592885 TNNQ9UQP3 1299 aa16.38■□□□□ 0.21
APOC1-209ENST00000592885 BTBD19C9JJ37 291 aa16.37■□□□□ 0.21
APOC1-209ENST00000592885 TLR2O60603 784 aa16.37■□□□□ 0.21
APOC1-209ENST00000592885 NPM3O75607 178 aaKnown RBP16.37■□□□□ 0.21
APOC1-209ENST00000592885 RGS3P49796 1198 aa16.37■□□□□ 0.21
APOC1-209ENST00000592885 GSTO1P78417 241 aa16.37■□□□□ 0.21
APOC1-209ENST00000592885 POLA2Q14181 598 aa16.37■□□□□ 0.21
APOC1-209ENST00000592885 GORABQ5T7V8 394 aa16.37■□□□□ 0.21
APOC1-209ENST00000592885 ANKRD23Q86SG2 305 aa16.37■□□□□ 0.21
APOC1-209ENST00000592885 FTSJ3Q8IY81 847 aaKnown RBP16.37■□□□□ 0.21
APOC1-209ENST00000592885 SPATA5Q8NB90 893 aa16.37■□□□□ 0.21
APOC1-209ENST00000592885 NEUROD6Q96NK8 337 aa16.37■□□□□ 0.21
APOC1-209ENST00000592885 GPR108Q9NPR9 543 aa16.37■□□□□ 0.21
APOC1-209ENST00000592885 HMG20BQ9P0W2 317 aa16.37■□□□□ 0.21
APOC1-209ENST00000592885 PDE4DIPQ5VU43 2346 aa16.37■□□□□ 0.21
APOC1-209ENST00000592885 GPR75-ASB3A0A0A6YYF3 556 aa16.36■□□□□ 0.21
APOC1-209ENST00000592885 IGSF3O75054 1194 aa16.36■□□□□ 0.21
APOC1-209ENST00000592885 GNRH1P01148 92 aa16.36■□□□□ 0.21
APOC1-209ENST00000592885 UQCRFS1P1P0C7P4 283 aa16.36■□□□□ 0.21
APOC1-209ENST00000592885 BTDP43251 543 aa16.36■□□□□ 0.21
APOC1-209ENST00000592885 MECOMQ03112 1051 aa16.36■□□□□ 0.21
APOC1-209ENST00000592885 SSH3Q8TE77 659 aa16.36■□□□□ 0.21
APOC1-209ENST00000592885 ARMC5Q96C12 935 aa16.36■□□□□ 0.21
APOC1-209ENST00000592885 ZBED9Q6R2W3 1325 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms