RNA–Protein interactions for RNA: ENST00000592354.5

CAPNS1-213, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-213ENST00000592354 CCDC102BQ68D86 513 aa16.76■□□□□ 0.27
CAPNS1-213ENST00000592354 OTUD7BQ6GQQ9 843 aa16.76■□□□□ 0.27
CAPNS1-213ENST00000592354 CDC42EP5Q6NZY7 148 aa16.76■□□□□ 0.27
CAPNS1-213ENST00000592354 MIER1Q8N108 512 aa16.76■□□□□ 0.27
CAPNS1-213ENST00000592354 ZKSCAN4Q969J2 545 aaPredicted RBP16.76■□□□□ 0.27
CAPNS1-213ENST00000592354 CLUAP1Q96AJ1 413 aa16.76■□□□□ 0.27
CAPNS1-213ENST00000592354 MRIQ9BWK5 157 aa16.76■□□□□ 0.27
CAPNS1-213ENST00000592354 SALL1Q9NSC2 1324 aa16.75■□□□□ 0.27
CAPNS1-213ENST00000592354 TESPA1A2RU30 521 aaPredicted RBP16.75■□□□□ 0.27
CAPNS1-213ENST00000592354 SPDYE5A6NIY4 337 aa16.75■□□□□ 0.27
CAPNS1-213ENST00000592354 TFCP2Q12800 502 aa16.75■□□□□ 0.27
CAPNS1-213ENST00000592354 NFIAQ12857 509 aa16.75■□□□□ 0.27
CAPNS1-213ENST00000592354 FKBP1CQ5VVH2 108 aa16.75■□□□□ 0.27
CAPNS1-213ENST00000592354 ATF7IPQ6VMQ6 1270 aa16.75■□□□□ 0.27
CAPNS1-213ENST00000592354 MIGA2Q7L4E1 593 aa16.75■□□□□ 0.27
CAPNS1-213ENST00000592354 CD99L2Q8TCZ2 262 aa16.75■□□□□ 0.27
CAPNS1-213ENST00000592354 DENND2AQ9ULE3 1009 aa16.75■□□□□ 0.27
CAPNS1-213ENST00000592354 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.75■□□□□ 0.27
CAPNS1-213ENST00000592354 A0A1B0GUL7 405 aa16.74■□□□□ 0.27
CAPNS1-213ENST00000592354 SEMA3EO15041 775 aa16.74■□□□□ 0.27
CAPNS1-213ENST00000592354 GTF2A2P52657 109 aa16.74■□□□□ 0.27
CAPNS1-213ENST00000592354 TIMM10P62072 90 aa16.74■□□□□ 0.27
CAPNS1-213ENST00000592354 RASGRF1Q13972 1273 aa16.74■□□□□ 0.27
CAPNS1-213ENST00000592354 OTOP1Q7RTM1 612 aa16.74■□□□□ 0.27
CAPNS1-213ENST00000592354 INPP5BP32019 993 aa16.73■□□□□ 0.27
CAPNS1-213ENST00000592354 CAP1Q01518 475 aa16.73■□□□□ 0.27
CAPNS1-213ENST00000592354 MTX1Q13505 466 aa16.73■□□□□ 0.27
CAPNS1-213ENST00000592354 TAF1CQ15572 869 aaPredicted RBP16.73■□□□□ 0.27
CAPNS1-213ENST00000592354 DCAF15Q66K64 600 aa16.73■□□□□ 0.27
CAPNS1-213ENST00000592354 FAM43AQ8N2R8 423 aa16.73■□□□□ 0.27
CAPNS1-213ENST00000592354 FAM151AQ8WW52 585 aa16.73■□□□□ 0.27
CAPNS1-213ENST00000592354 HOOK2Q96ED9 719 aa16.73■□□□□ 0.27
CAPNS1-213ENST00000592354 ERO1AQ96HE7 468 aa16.73■□□□□ 0.27
CAPNS1-213ENST00000592354 ZNF341Q9BYN7 854 aa16.73■□□□□ 0.27
CAPNS1-213ENST00000592354 MAST2Q6P0Q8 1798 aa16.73■□□□□ 0.27
CAPNS1-213ENST00000592354 RBBP6Q7Z6E9 1792 aaKnown RBP16.73■□□□□ 0.27
CAPNS1-213ENST00000592354 HTTP42858 3142 aa16.73■□□□□ 0.27
CAPNS1-213ENST00000592354 IPO8O15397 1037 aaKnown RBP16.72■□□□□ 0.27
CAPNS1-213ENST00000592354 HNRNPUQ00839 825 aaKnown RBP eCLIP16.72■□□□□ 0.27
CAPNS1-213ENST00000592354 ERO1BQ86YB8 467 aa16.72■□□□□ 0.27
CAPNS1-213ENST00000592354 DZIP1Q86YF9 867 aaKnown RBP16.72■□□□□ 0.27
CAPNS1-213ENST00000592354 XAGE2Q96GT9 111 aa16.72■□□□□ 0.27
CAPNS1-213ENST00000592354 USP40Q9NVE5 1235 aa16.72■□□□□ 0.27
CAPNS1-213ENST00000592354 FAM198AQ9UFP1 575 aa16.72■□□□□ 0.27
CAPNS1-213ENST00000592354 ABCF2Q9UG63 623 aa16.72■□□□□ 0.27
CAPNS1-213ENST00000592354 DOCK1Q14185 1865 aa16.71■□□□□ 0.27
CAPNS1-213ENST00000592354 PNMA6EA0A0J9YXQ4 647 aa16.71■□□□□ 0.27
CAPNS1-213ENST00000592354 IRF6O14896 467 aa16.71■□□□□ 0.27
CAPNS1-213ENST00000592354 GNAI2P04899 355 aa16.71■□□□□ 0.27
CAPNS1-213ENST00000592354 SP3Q02447 781 aa16.71■□□□□ 0.27
CAPNS1-213ENST00000592354 TMEM57Q8N5G2 664 aa16.71■□□□□ 0.27
CAPNS1-213ENST00000592354 RFX7Q2KHR2 1363 aa16.71■□□□□ 0.27
CAPNS1-213ENST00000592354 GAKO14976 1311 aa16.7■□□□□ 0.26
CAPNS1-213ENST00000592354 CETPP11597 493 aa16.7■□□□□ 0.26
CAPNS1-213ENST00000592354 PPIL2Q13356 520 aa16.7■□□□□ 0.26
CAPNS1-213ENST00000592354 MVPQ14764 893 aaKnown RBP16.7■□□□□ 0.26
CAPNS1-213ENST00000592354 ZFPM1Q8IX07 1006 aa16.7■□□□□ 0.26
CAPNS1-213ENST00000592354 ZGPATQ8N5A5 531 aaKnown RBP16.7■□□□□ 0.26
CAPNS1-213ENST00000592354 NEUROD6Q96NK8 337 aa16.7■□□□□ 0.26
CAPNS1-213ENST00000592354 ZFYVE28Q9HCC9 887 aa16.7■□□□□ 0.26
CAPNS1-213ENST00000592354 AKAP2Q9Y2D5 859 aa16.7■□□□□ 0.26
CAPNS1-213ENST00000592354 BTBD19C9JJ37 291 aa16.69■□□□□ 0.26
CAPNS1-213ENST00000592354 RGS3P49796 1198 aa16.69■□□□□ 0.26
CAPNS1-213ENST00000592354 SNAPC2Q13487 334 aa16.69■□□□□ 0.26
CAPNS1-213ENST00000592354 PI16Q6UXB8 463 aa16.69■□□□□ 0.26
CAPNS1-213ENST00000592354 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.69■□□□□ 0.26
CAPNS1-213ENST00000592354 EFCC1Q9HA90 598 aa16.69■□□□□ 0.26
CAPNS1-213ENST00000592354 PDS5AQ29RF7 1337 aaKnown RBP16.69■□□□□ 0.26
CAPNS1-213ENST00000592354 ATRNL1Q5VV63 1379 aa16.68■□□□□ 0.26
CAPNS1-213ENST00000592354 BTDP43251 543 aa16.68■□□□□ 0.26
CAPNS1-213ENST00000592354 PICALMQ13492 652 aa16.68■□□□□ 0.26
CAPNS1-213ENST00000592354 ZKSCAN2Q63HK3 967 aa16.68■□□□□ 0.26
CAPNS1-213ENST00000592354 C1orf115Q9H7X2 142 aa16.68■□□□□ 0.26
CAPNS1-213ENST00000592354 PTPN22Q9Y2R2 807 aa16.68■□□□□ 0.26
CAPNS1-213ENST00000592354 PTPRFP10586 1907 aa16.68■□□□□ 0.26
CAPNS1-213ENST00000592354 PHIPQ8WWQ0 1821 aa16.68■□□□□ 0.26
CAPNS1-213ENST00000592354 ATAD5Q96QE3 1844 aa16.68■□□□□ 0.26
CAPNS1-213ENST00000592354 MROH7-TTC4A0A0A0MT08 1334 aa16.68■□□□□ 0.26
CAPNS1-213ENST00000592354 CENPFP49454 3210 aa16.67■□□□□ 0.26
CAPNS1-213ENST00000592354 ECM2O94769 699 aaPredicted RBP16.67■□□□□ 0.26
CAPNS1-213ENST00000592354 PPATQ06203 517 aa16.67■□□□□ 0.26
CAPNS1-213ENST00000592354 GORABQ5T7V8 394 aa16.67■□□□□ 0.26
CAPNS1-213ENST00000592354 ZSCAN29Q8IWY8 852 aaPredicted RBP16.67■□□□□ 0.26
CAPNS1-213ENST00000592354 HMG20BQ9P0W2 317 aa16.67■□□□□ 0.26
CAPNS1-213ENST00000592354 ZNF112Q9UJU3 913 aa16.67■□□□□ 0.26
CAPNS1-213ENST00000592354 MYO5AQ9Y4I1 1855 aaKnown RBP16.67■□□□□ 0.26
CAPNS1-213ENST00000592354 ZBTB22O15209 634 aa16.66■□□□□ 0.26
CAPNS1-213ENST00000592354 SLURP2P0DP57 97 aa16.66■□□□□ 0.26
CAPNS1-213ENST00000592354 MECOMQ03112 1051 aa16.66■□□□□ 0.26
CAPNS1-213ENST00000592354 ERICH6Q7L0X2 663 aa16.66■□□□□ 0.26
CAPNS1-213ENST00000592354 SH3BP5LQ7L8J4 393 aa16.66■□□□□ 0.26
CAPNS1-213ENST00000592354 ZNF384Q8TF68 577 aa16.66■□□□□ 0.26
CAPNS1-213ENST00000592354 CDK5RAP2Q96SN8 1893 aa16.66■□□□□ 0.26
CAPNS1-213ENST00000592354 IDI2Q9BXS1 227 aa16.66■□□□□ 0.26
CAPNS1-213ENST00000592354 DDX4Q9NQI0 724 aaKnown RBP16.66■□□□□ 0.26
CAPNS1-213ENST00000592354 ENTPD3O75355 529 aa16.65■□□□□ 0.26
CAPNS1-213ENST00000592354 WDHD1O75717 1129 aaPredicted RBP16.65■□□□□ 0.26
CAPNS1-213ENST00000592354 G3BP1Q13283 466 aaKnown RBP eCLIP16.65■□□□□ 0.261e-8■■■■■ 40.6
CAPNS1-213ENST00000592354 SPTY2D1Q68D10 685 aaPredicted RBP16.65■□□□□ 0.26
CAPNS1-213ENST00000592354 TBC1D9Q6ZT07 1266 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms