RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 ZNF277Q9NRM2 450 aaPredicted RBP13.09□□□□□ -0.31
SEH1L-208ENST00000590843 ASNSP08243 561 aa13.08□□□□□ -0.31
SEH1L-208ENST00000590843 MYCLP12524 364 aaPredicted RBP13.08□□□□□ -0.31
SEH1L-208ENST00000590843 SMC1AQ14683 1233 aaKnown RBP13.08□□□□□ -0.31
SEH1L-208ENST00000590843 VPS36Q86VN1 386 aa13.08□□□□□ -0.31
SEH1L-208ENST00000590843 FOXP4Q8IVH2 680 aaPredicted RBP13.08□□□□□ -0.31
SEH1L-208ENST00000590843 GLG1Q92896 1179 aa13.08□□□□□ -0.31
SEH1L-208ENST00000590843 ERO1AQ96HE7 468 aa13.08□□□□□ -0.31
SEH1L-208ENST00000590843 PLSCR1O15162 318 aa13.08□□□□□ -0.32
SEH1L-208ENST00000590843 MKRN3Q13064 507 aaKnown RBP13.08□□□□□ -0.32
SEH1L-208ENST00000590843 GOLGA6L1Q8N7Z2 621 aa13.08□□□□□ -0.32
SEH1L-208ENST00000590843 ICA1Q05084 483 aa13.08□□□□□ -0.32
SEH1L-208ENST00000590843 SNAPC2Q13487 334 aa13.08□□□□□ -0.32
SEH1L-208ENST00000590843 FAM160B1Q5W0V3 765 aa13.08□□□□□ -0.32
SEH1L-208ENST00000590843 MADDQ8WXG6 1647 aa13.08□□□□□ -0.32
SEH1L-208ENST00000590843 IBTKQ9P2D0 1353 aaPredicted RBP13.08□□□□□ -0.32
SEH1L-208ENST00000590843 ECE2O60344 883 aa13.08□□□□□ -0.32
SEH1L-208ENST00000590843 MBD4O95243 580 aa13.08□□□□□ -0.32
SEH1L-208ENST00000590843 NT5C2P49902 561 aa13.08□□□□□ -0.32
SEH1L-208ENST00000590843 CHRNDQ07001 517 aa13.08□□□□□ -0.32
SEH1L-208ENST00000590843 TULP4Q9NRJ4 1543 aa13.08□□□□□ -0.32
SEH1L-208ENST00000590843 CETPP11597 493 aa13.07□□□□□ -0.32
SEH1L-208ENST00000590843 BICC1Q9H694 974 aaKnown RBP13.07□□□□□ -0.32
SEH1L-208ENST00000590843 TAF5LO75529 589 aa13.07□□□□□ -0.32
SEH1L-208ENST00000590843 ME1P48163 572 aa13.07□□□□□ -0.32
SEH1L-208ENST00000590843 LARP1BQ659C4 914 aaKnown RBP13.07□□□□□ -0.32
SEH1L-208ENST00000590843 XAGE2Q96GT9 111 aa13.07□□□□□ -0.32
SEH1L-208ENST00000590843 HOXC10Q9NYD6 342 aa13.07□□□□□ -0.32
SEH1L-208ENST00000590843 ZHX1Q9UKY1 873 aaPredicted RBP13.07□□□□□ -0.32
SEH1L-208ENST00000590843 MED14O60244 1454 aa13.07□□□□□ -0.32
SEH1L-208ENST00000590843 PRDM15P57071 1507 aaPredicted RBP13.07□□□□□ -0.32
SEH1L-208ENST00000590843 DPEP1P16444 411 aa13.07□□□□□ -0.32
SEH1L-208ENST00000590843 SMTNP53814 917 aa13.07□□□□□ -0.32
SEH1L-208ENST00000590843 TFCP2Q12800 502 aa13.07□□□□□ -0.32
SEH1L-208ENST00000590843 ARHGEF16Q5VV41 709 aa13.07□□□□□ -0.32
SEH1L-208ENST00000590843 MAPKAPK5Q8IW41 473 aa13.07□□□□□ -0.32
SEH1L-208ENST00000590843 TGFBRAP1Q8WUH2 860 aa13.07□□□□□ -0.32
SEH1L-208ENST00000590843 FTOQ9C0B1 505 aaKnown RBP eCLIP13.07□□□□□ -0.32
SEH1L-208ENST00000590843 ADARB2Q9NS39 739 aaKnown RBP13.07□□□□□ -0.32
SEH1L-208ENST00000590843 AATFQ9NY61 560 aaKnown RBP eCLIP13.07□□□□□ -0.32
SEH1L-208ENST00000590843 ZNF215Q9UL58 517 aaPredicted RBP13.07□□□□□ -0.32
SEH1L-208ENST00000590843 NOC2LQ9Y3T9 749 aaKnown RBP13.07□□□□□ -0.32
SEH1L-208ENST00000590843 POTEB2H3BUK9 544 aa13.07□□□□□ -0.32
SEH1L-208ENST00000590843 BTDP43251 543 aa13.07□□□□□ -0.32
SEH1L-208ENST00000590843 FCGRTP55899 365 aa13.07□□□□□ -0.32
SEH1L-208ENST00000590843 MAP2K1Q02750 393 aaPredicted RBP13.07□□□□□ -0.32
SEH1L-208ENST00000590843 TRMT1LQ7Z2T5 733 aaKnown RBP13.07□□□□□ -0.32
SEH1L-208ENST00000590843 KRT13P13646 458 aa13.06□□□□□ -0.32
SEH1L-208ENST00000590843 CCDC181Q5TID7 509 aa13.06□□□□□ -0.32
SEH1L-208ENST00000590843 CDHR1Q96JP9 859 aa13.06□□□□□ -0.32
SEH1L-208ENST00000590843 MYCP01106 439 aaPredicted RBP13.06□□□□□ -0.32
SEH1L-208ENST00000590843 ACTN1P12814 892 aa13.06□□□□□ -0.32
SEH1L-208ENST00000590843 KCNJ6P48051 423 aa13.06□□□□□ -0.32
SEH1L-208ENST00000590843 SNX16P57768 344 aa13.06□□□□□ -0.32
SEH1L-208ENST00000590843 CFAP100Q494V2 611 aa13.06□□□□□ -0.32
SEH1L-208ENST00000590843 DPF3Q92784 378 aa13.06□□□□□ -0.32
SEH1L-208ENST00000590843 KIFC2Q96AC6 838 aa13.06□□□□□ -0.32
SEH1L-208ENST00000590843 HTATIP2Q9BUP3 242 aa13.06□□□□□ -0.32
SEH1L-208ENST00000590843 EPB41L2O43491 1005 aaKnown RBP13.06□□□□□ -0.32
SEH1L-208ENST00000590843 SP4Q02446 784 aa13.06□□□□□ -0.32
SEH1L-208ENST00000590843 RBM46Q8TBY0 533 aaKnown RBP13.06□□□□□ -0.32
SEH1L-208ENST00000590843 IQSEC2Q5JU85 1478 aa13.06□□□□□ -0.32
SEH1L-208ENST00000590843 ZBBXA8MT70 800 aa13.06□□□□□ -0.32
SEH1L-208ENST00000590843 PPP2R5BQ15173 497 aa13.06□□□□□ -0.32
SEH1L-208ENST00000590843 GOLGA1Q92805 767 aa13.06□□□□□ -0.32
SEH1L-208ENST00000590843 TBC1D2Q9BYX2 928 aa13.06□□□□□ -0.32
SEH1L-208ENST00000590843 HELLSQ9NRZ9 838 aa13.06□□□□□ -0.32
SEH1L-208ENST00000590843 CNOT7Q9UIV1 285 aaKnown RBP13.06□□□□□ -0.32
SEH1L-208ENST00000590843 USP16Q9Y5T5 823 aa13.06□□□□□ -0.32
SEH1L-208ENST00000590843 CNTNAP4Q9C0A0 1308 aa13.05□□□□□ -0.32
SEH1L-208ENST00000590843 STK25O00506 426 aa13.05□□□□□ -0.32
SEH1L-208ENST00000590843 LETM1O95202 739 aaPredicted RBP13.05□□□□□ -0.32
SEH1L-208ENST00000590843 KCNQ4P56696 695 aa13.05□□□□□ -0.32
SEH1L-208ENST00000590843 KRT85P78386 507 aa13.05□□□□□ -0.32
SEH1L-208ENST00000590843 CDCA7LQ96GN5 454 aa13.05□□□□□ -0.32
SEH1L-208ENST00000590843 PI4KBQ9UBF8 816 aa13.05□□□□□ -0.32
SEH1L-208ENST00000590843 EPHX2P34913 555 aa13.05□□□□□ -0.32
SEH1L-208ENST00000590843 FNBP4Q8N3X1 1017 aaPredicted RBP13.05□□□□□ -0.32
SEH1L-208ENST00000590843 SEPT11Q9NVA2 429 aaKnown RBP13.05□□□□□ -0.32
SEH1L-208ENST00000590843 CHL1O00533 1208 aa13.05□□□□□ -0.32
SEH1L-208ENST00000590843 IGSF3O75054 1194 aa13.05□□□□□ -0.32
SEH1L-208ENST00000590843 MICU3Q86XE3 530 aa13.05□□□□□ -0.32
SEH1L-208ENST00000590843 GPCPD1Q9NPB8 672 aa13.05□□□□□ -0.32
SEH1L-208ENST00000590843 ATG3Q9NT62 314 aa13.05□□□□□ -0.32
SEH1L-208ENST00000590843 HAUS2Q9NVX0 235 aa13.05□□□□□ -0.32
SEH1L-208ENST00000590843 FDX1P10109 184 aa13.05□□□□□ -0.32
SEH1L-208ENST00000590843 ALAS1P13196 640 aa13.04□□□□□ -0.32
SEH1L-208ENST00000590843 CASTP20810 708 aaKnown RBP13.04□□□□□ -0.32
SEH1L-208ENST00000590843 OTUD6AQ7L8S5 288 aa13.04□□□□□ -0.32
SEH1L-208ENST00000590843 ZMYND15Q9H091 742 aa13.04□□□□□ -0.32
SEH1L-208ENST00000590843 RABGAP1Q9Y3P9 1069 aa13.04□□□□□ -0.32
SEH1L-208ENST00000590843 FER1L4A9Z1Z3 1794 aa13.04□□□□□ -0.32
SEH1L-208ENST00000590843 CCDC172P0C7W6 258 aa13.04□□□□□ -0.32
SEH1L-208ENST00000590843 CDR1P51861 262 aa13.04□□□□□ -0.32
SEH1L-208ENST00000590843 STRN3Q13033 797 aa13.04□□□□□ -0.32
SEH1L-208ENST00000590843 KRT79Q5XKE5 535 aa13.04□□□□□ -0.32
SEH1L-208ENST00000590843 FAM160B2Q86V87 743 aa13.04□□□□□ -0.32
SEH1L-208ENST00000590843 TFRCP02786 760 aaKnown RBP13.04□□□□□ -0.32
SEH1L-208ENST00000590843 FOXD4L6Q3SYB3 417 aaPredicted RBP13.04□□□□□ -0.32
SEH1L-208ENST00000590843 FOXD4L3Q6VB84 417 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms