RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 NECTIN1Q15223 517 aa20.3■□□□□ 0.84
ATPAF1-214ENST00000576409 HEATR3Q7Z4Q2 680 aa20.3■□□□□ 0.84
ATPAF1-214ENST00000576409 SERTAD1Q9UHV2 236 aa20.3■□□□□ 0.84
ATPAF1-214ENST00000576409 TTC37Q6PGP7 1564 aa20.3■□□□□ 0.84
ATPAF1-214ENST00000576409 PDIA3P30101 505 aaKnown RBP20.3■□□□□ 0.84
ATPAF1-214ENST00000576409 SMC1AQ14683 1233 aaKnown RBP20.3■□□□□ 0.84
ATPAF1-214ENST00000576409 AIFM3Q96NN9 605 aa20.3■□□□□ 0.84
ATPAF1-214ENST00000576409 KAT14Q9H8E8 782 aa20.3■□□□□ 0.84
ATPAF1-214ENST00000576409 TAB2Q9NYJ8 693 aa20.3■□□□□ 0.84
ATPAF1-214ENST00000576409 IRS4O14654 1257 aaPredicted RBP20.29■□□□□ 0.84
ATPAF1-214ENST00000576409 ATP1A3P13637 1013 aa20.29■□□□□ 0.84
ATPAF1-214ENST00000576409 CCDC144BQ3MJ40 725 aa20.29■□□□□ 0.84
ATPAF1-214ENST00000576409 APPBP2Q92624 585 aa20.29■□□□□ 0.84
ATPAF1-214ENST00000576409 CCDC42Q96M95 316 aa20.29■□□□□ 0.84
ATPAF1-214ENST00000576409 CTNND2Q9UQB3 1225 aa20.29■□□□□ 0.84
ATPAF1-214ENST00000576409 ADAMTS2O95450 1211 aa20.29■□□□□ 0.84
ATPAF1-214ENST00000576409 FGAP02671 866 aa20.29■□□□□ 0.84
ATPAF1-214ENST00000576409 UQCRFS1P1P0C7P4 283 aa20.29■□□□□ 0.84
ATPAF1-214ENST00000576409 NEFHP12036 1026 aa20.29■□□□□ 0.84
ATPAF1-214ENST00000576409 KRT9P35527 623 aa20.29■□□□□ 0.84
ATPAF1-214ENST00000576409 RBM5P52756 815 aaKnown RBP eCLIP20.29■□□□□ 0.84
ATPAF1-214ENST00000576409 BLZF1Q9H2G9 400 aa20.29■□□□□ 0.84
ATPAF1-214ENST00000576409 PTCH1Q13635 1447 aa20.29■□□□□ 0.84
ATPAF1-214ENST00000576409 HOXB7P09629 217 aa20.29■□□□□ 0.84
ATPAF1-214ENST00000576409 USP8P40818 1118 aa20.29■□□□□ 0.84
ATPAF1-214ENST00000576409 NCBP1Q09161 790 aaKnown RBP20.29■□□□□ 0.84
ATPAF1-214ENST00000576409 TTLL7Q6ZT98 887 aa20.29■□□□□ 0.84
ATPAF1-214ENST00000576409 IFT81Q8WYA0 676 aa20.29■□□□□ 0.84
ATPAF1-214ENST00000576409 UIMC1Q96RL1 719 aa20.29■□□□□ 0.84
ATPAF1-214ENST00000576409 PUS3Q9BZE2 481 aaKnown RBP20.29■□□□□ 0.84
ATPAF1-214ENST00000576409 BTBD18B2RXH4 712 aa20.28■□□□□ 0.84
ATPAF1-214ENST00000576409 SF3A3Q12874 501 aaKnown RBP eCLIP20.28■□□□□ 0.84
ATPAF1-214ENST00000576409 CLEC17AQ6ZS10 378 aa20.28■□□□□ 0.84
ATPAF1-214ENST00000576409 PGBD1Q96JS3 809 aa20.28■□□□□ 0.84
ATPAF1-214ENST00000576409 PCDHA5Q9Y5H7 936 aa20.28■□□□□ 0.84
ATPAF1-214ENST00000576409 USP27XA6NNY8 438 aa20.28■□□□□ 0.84
ATPAF1-214ENST00000576409 PSMA7O14818 248 aa20.28■□□□□ 0.84
ATPAF1-214ENST00000576409 PFKFB2O60825 505 aa20.28■□□□□ 0.84
ATPAF1-214ENST00000576409 CYLC1P35663 651 aaPredicted RBP20.28■□□□□ 0.84
ATPAF1-214ENST00000576409 KIF5AQ12840 1032 aa20.28■□□□□ 0.84
ATPAF1-214ENST00000576409 IMPACTQ9P2X3 320 aa20.28■□□□□ 0.84
ATPAF1-214ENST00000576409 MYO6Q9UM54 1294 aa20.28■□□□□ 0.84
ATPAF1-214ENST00000576409 CHGBP05060 677 aa20.28■□□□□ 0.84
ATPAF1-214ENST00000576409 PI16Q6UXB8 463 aa20.28■□□□□ 0.84
ATPAF1-214ENST00000576409 NSUN7Q8NE18 718 aaKnown RBP20.28■□□□□ 0.84
ATPAF1-214ENST00000576409 MCM3P25205 808 aa20.27■□□□□ 0.84
ATPAF1-214ENST00000576409 FBXO38Q6PIJ6 1188 aa20.27■□□□□ 0.84
ATPAF1-214ENST00000576409 ALS2CR12Q96Q35 445 aa20.27■□□□□ 0.84
ATPAF1-214ENST00000576409 EXOC1Q9NV70 894 aa20.27■□□□□ 0.84
ATPAF1-214ENST00000576409 SPAG1Q07617 926 aa20.27■□□□□ 0.83
ATPAF1-214ENST00000576409 CNNM2Q9H8M5 875 aa20.27■□□□□ 0.83
ATPAF1-214ENST00000576409 ZNF76P36508 570 aa20.26■□□□□ 0.83
ATPAF1-214ENST00000576409 GTF2A1P52655 376 aaPredicted RBP20.26■□□□□ 0.83
ATPAF1-214ENST00000576409 PIP4K2BP78356 416 aa20.26■□□□□ 0.83
ATPAF1-214ENST00000576409 POSTNQ15063 836 aa20.26■□□□□ 0.83
ATPAF1-214ENST00000576409 HDXQ7Z353 690 aa20.26■□□□□ 0.83
ATPAF1-214ENST00000576409 PLBD2Q8NHP8 589 aa20.26■□□□□ 0.83
ATPAF1-214ENST00000576409 VPS54Q9P1Q0 977 aa20.26■□□□□ 0.83
ATPAF1-214ENST00000576409 ACSBG1Q96GR2 724 aa20.26■□□□□ 0.83
ATPAF1-214ENST00000576409 RASSF4Q9H2L5 321 aa20.26■□□□□ 0.83
ATPAF1-214ENST00000576409 TUBB4AP04350 444 aa20.26■□□□□ 0.83
ATPAF1-214ENST00000576409 ITGA6P23229 1130 aa20.26■□□□□ 0.83
ATPAF1-214ENST00000576409 TMTC2Q8N394 836 aa20.26■□□□□ 0.83
ATPAF1-214ENST00000576409 IQUBQ8NA54 791 aa20.26■□□□□ 0.83
ATPAF1-214ENST00000576409 FBXO18Q8NFZ0 1043 aa20.26■□□□□ 0.83
ATPAF1-214ENST00000576409 DYDC1Q8WWB3 177 aa20.26■□□□□ 0.83
ATPAF1-214ENST00000576409 DCAF5Q96JK2 942 aa20.26■□□□□ 0.83
ATPAF1-214ENST00000576409 KRT86O43790 486 aa20.25■□□□□ 0.83
ATPAF1-214ENST00000576409 SSR1P43307 286 aaKnown RBP20.25■□□□□ 0.83
ATPAF1-214ENST00000576409 SPECC1LQ69YQ0 1117 aa20.25■□□□□ 0.83
ATPAF1-214ENST00000576409 CALML4Q96GE6 196 aa20.25■□□□□ 0.83
ATPAF1-214ENST00000576409 PPP1R13BQ96KQ4 1090 aa20.25■□□□□ 0.83
ATPAF1-214ENST00000576409 EPC1Q9H2F5 836 aa20.25■□□□□ 0.83
ATPAF1-214ENST00000576409 GRAMD1CQ8IYS0 662 aa20.25■□□□□ 0.83
ATPAF1-214ENST00000576409 PPP2R2CQ9Y2T4 447 aa20.25■□□□□ 0.83
ATPAF1-214ENST00000576409 KIF5BP33176 963 aa20.24■□□□□ 0.83
ATPAF1-214ENST00000576409 RILPL1Q5EBL4 403 aa20.24■□□□□ 0.83
ATPAF1-214ENST00000576409 PIK3AP1Q6ZUJ8 805 aa20.24■□□□□ 0.83
ATPAF1-214ENST00000576409 GYS2P54840 703 aa20.24■□□□□ 0.83
ATPAF1-214ENST00000576409 ZSCAN26Q16670 478 aa20.24■□□□□ 0.83
ATPAF1-214ENST00000576409 CNGA4Q8IV77 575 aa20.24■□□□□ 0.83
ATPAF1-214ENST00000576409 TSG101Q99816 390 aa20.24■□□□□ 0.83
ATPAF1-214ENST00000576409 BABAM1Q9NWV8 329 aa20.24■□□□□ 0.83
ATPAF1-214ENST00000576409 SLC52A2Q9HAB3 445 aa20.24■□□□□ 0.83
ATPAF1-214ENST00000576409 ZNF532Q9HCE3 1301 aa20.24■□□□□ 0.83
ATPAF1-214ENST00000576409 IVLP07476 585 aa20.24■□□□□ 0.83
ATPAF1-214ENST00000576409 TBC1D8BQ0IIM8 1120 aa20.24■□□□□ 0.83
ATPAF1-214ENST00000576409 ABCA8O94911 1581 aa20.23■□□□□ 0.83
ATPAF1-214ENST00000576409 ADORA1P30542 326 aa20.23■□□□□ 0.83
ATPAF1-214ENST00000576409 KRT2P35908 639 aa20.23■□□□□ 0.83
ATPAF1-214ENST00000576409 PDE4BQ07343 736 aa20.23■□□□□ 0.83
ATPAF1-214ENST00000576409 CUTAO60888 179 aa20.23■□□□□ 0.83
ATPAF1-214ENST00000576409 DDIT3P35638 169 aa20.23■□□□□ 0.83
ATPAF1-214ENST00000576409 GIMAP7Q8NHV1 300 aa20.23■□□□□ 0.83
ATPAF1-214ENST00000576409 MYOM2P54296 1465 aa20.23■□□□□ 0.83
ATPAF1-214ENST00000576409 TTC14Q96N46 770 aa20.23■□□□□ 0.83
ATPAF1-214ENST00000576409 NAPGQ99747 312 aaPredicted RBP20.23■□□□□ 0.83
ATPAF1-214ENST00000576409 EBAG9O00559 213 aa20.22■□□□□ 0.83
ATPAF1-214ENST00000576409 HSF2BPO75031 334 aa20.22■□□□□ 0.83
ATPAF1-214ENST00000576409 SPAG5Q96R06 1193 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms