RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 COL11A2P13942 1736 aaPredicted RBP33.57■■■□□ 2.96
CTDNEP1-210ENST00000574322 ZSCAN22P10073 491 aaPredicted RBP33.56■■■□□ 2.96
CTDNEP1-210ENST00000574322 KCNA3P22001 575 aa33.56■■■□□ 2.96
CTDNEP1-210ENST00000574322 TRDNQ13061 729 aa33.56■■■□□ 2.96
CTDNEP1-210ENST00000574322 WDR66Q8TBY9 1149 aa33.56■■■□□ 2.96
CTDNEP1-210ENST00000574322 NSFL1CQ9UNZ2 370 aaKnown RBP33.56■■■□□ 2.96
CTDNEP1-210ENST00000574322 CCDC88AQ3V6T2 1871 aa33.56■■■□□ 2.96
CTDNEP1-210ENST00000574322 MIGA1Q8NAN2 632 aa33.56■■■□□ 2.96
CTDNEP1-210ENST00000574322 PRC1O43663 620 aa33.55■■■□□ 2.96
CTDNEP1-210ENST00000574322 PRKAB2O43741 272 aa33.55■■■□□ 2.96
CTDNEP1-210ENST00000574322 PDCP20941 246 aa33.55■■■□□ 2.96
CTDNEP1-210ENST00000574322 ANTXR2P58335 489 aa33.55■■■□□ 2.96
CTDNEP1-210ENST00000574322 DUOX1Q9NRD9 1551 aa33.54■■■□□ 2.96
CTDNEP1-210ENST00000574322 ALDH1B1P30837 517 aa33.54■■■□□ 2.96
CTDNEP1-210ENST00000574322 MECOMQ03112 1051 aa33.54■■■□□ 2.96
CTDNEP1-210ENST00000574322 UFL1O94874 794 aa33.53■■■□□ 2.96
CTDNEP1-210ENST00000574322 APOBRQ0VD83 1088 aa33.53■■■□□ 2.96
CTDNEP1-210ENST00000574322 STK3Q13188 491 aa33.53■■■□□ 2.96
CTDNEP1-210ENST00000574322 MCTP1Q6DN14 999 aa33.53■■■□□ 2.96
CTDNEP1-210ENST00000574322 CNKSR1Q969H4 720 aa33.53■■■□□ 2.96
CTDNEP1-210ENST00000574322 PIM2Q9P1W9 311 aa33.53■■■□□ 2.96
CTDNEP1-210ENST00000574322 ATP6V0A2Q9Y487 856 aa33.53■■■□□ 2.96
CTDNEP1-210ENST00000574322 CHD4Q14839 1912 aa33.53■■■□□ 2.96
CTDNEP1-210ENST00000574322 PPEF1O14829 653 aaPredicted RBP33.53■■■□□ 2.96
CTDNEP1-210ENST00000574322 SCRN1Q12765 414 aa33.53■■■□□ 2.96
CTDNEP1-210ENST00000574322 GIMAP6Q6P9H5 292 aa33.53■■■□□ 2.96
CTDNEP1-210ENST00000574322 IL1R1P14778 569 aa33.52■■■□□ 2.96
CTDNEP1-210ENST00000574322 PDIA3P30101 505 aaKnown RBP33.52■■■□□ 2.96
CTDNEP1-210ENST00000574322 CHAF1AQ13111 956 aaPredicted RBP33.52■■■□□ 2.96
CTDNEP1-210ENST00000574322 SMARCC2Q8TAQ2 1214 aa33.52■■■□□ 2.96
CTDNEP1-210ENST00000574322 MTMR6Q9Y217 621 aa33.52■■■□□ 2.96
CTDNEP1-210ENST00000574322 CHST3Q7LGC8 479 aa33.51■■■□□ 2.96
CTDNEP1-210ENST00000574322 TBC1D16Q8TBP0 767 aa33.51■■■□□ 2.96
CTDNEP1-210ENST00000574322 CNNM2Q9H8M5 875 aa33.51■■■□□ 2.96
CTDNEP1-210ENST00000574322 LMBRD1Q9NUN5 540 aa33.51■■■□□ 2.96
CTDNEP1-210ENST00000574322 TDO2P48775 406 aa33.5■■■□□ 2.95
CTDNEP1-210ENST00000574322 TTLL6Q8N841 843 aa33.5■■■□□ 2.95
CTDNEP1-210ENST00000574322 ANAPC4Q9UJX5 808 aa33.5■■■□□ 2.95
CTDNEP1-210ENST00000574322 PRDX5P30044 214 aa33.5■■■□□ 2.95
CTDNEP1-210ENST00000574322 AKNAD1Q5T1N1 836 aa33.5■■■□□ 2.95
CTDNEP1-210ENST00000574322 STAG1Q8WVM7 1258 aa33.5■■■□□ 2.95
CTDNEP1-210ENST00000574322 CD209Q9NNX6 404 aa33.5■■■□□ 2.95
CTDNEP1-210ENST00000574322 POLLQ9UGP5 575 aa33.5■■■□□ 2.95
CTDNEP1-210ENST00000574322 F13A1P00488 732 aa33.49■■■□□ 2.95
CTDNEP1-210ENST00000574322 FOXD4L5Q5VV16 416 aaPredicted RBP33.49■■■□□ 2.95
CTDNEP1-210ENST00000574322 FOXD4L4Q8WXT5 416 aaPredicted RBP33.49■■■□□ 2.95
CTDNEP1-210ENST00000574322 LARP1BQ659C4 914 aaKnown RBP33.48■■■□□ 2.95
CTDNEP1-210ENST00000574322 DEKP35659 375 aaKnown RBP33.48■■■□□ 2.95
CTDNEP1-210ENST00000574322 TMEM87BQ96K49 555 aa33.48■■■□□ 2.95
CTDNEP1-210ENST00000574322 KRT23Q9C075 422 aa33.48■■■□□ 2.95
CTDNEP1-210ENST00000574322 ATP6V1DQ9Y5K8 247 aa33.48■■■□□ 2.95
CTDNEP1-210ENST00000574322 NEDD4P46934 1319 aa33.47■■■□□ 2.95
CTDNEP1-210ENST00000574322 DLEC1Q9Y238 1755 aa33.47■■■□□ 2.95
CTDNEP1-210ENST00000574322 DYNLL1P63167 89 aaKnown RBP33.46■■■□□ 2.95
CTDNEP1-210ENST00000574322 DALRD3Q5D0E6 543 aaKnown RBP33.46■■■□□ 2.95
CTDNEP1-210ENST00000574322 CYB5R4Q7L1T6 521 aa33.46■■■□□ 2.95
CTDNEP1-210ENST00000574322 MTA3Q9BTC8 594 aa33.46■■■□□ 2.95
CTDNEP1-210ENST00000574322 KLHL40Q2TBA0 621 aa33.45■■■□□ 2.95
CTDNEP1-210ENST00000574322 NSUN7Q8NE18 718 aaKnown RBP33.45■■■□□ 2.95
CTDNEP1-210ENST00000574322 RNF41Q9H4P4 317 aaPredicted RBP33.45■■■□□ 2.95
CTDNEP1-210ENST00000574322 GPHNQ9NQX3 736 aaPredicted RBP33.45■■■□□ 2.95
CTDNEP1-210ENST00000574322 ANGEL1Q9UNK9 670 aaKnown RBP33.45■■■□□ 2.95
CTDNEP1-210ENST00000574322 LDHBP07195 334 aaKnown RBP33.45■■■□□ 2.94
CTDNEP1-210ENST00000574322 HMGN5P82970 282 aaKnown RBP33.45■■■□□ 2.94
CTDNEP1-210ENST00000574322 CTDSPL2Q05D32 466 aa33.45■■■□□ 2.94
CTDNEP1-210ENST00000574322 MFSD6Q6ZSS7 791 aa33.45■■■□□ 2.94
CTDNEP1-210ENST00000574322 SDR42E1Q8WUS8 393 aa33.45■■■□□ 2.94
CTDNEP1-210ENST00000574322 GPR101Q96P66 508 aaPredicted RBP33.45■■■□□ 2.94
CTDNEP1-210ENST00000574322 TACC3Q9Y6A5 838 aa33.45■■■□□ 2.94
CTDNEP1-210ENST00000574322 B4E1Z4 1266 aa33.44■■■□□ 2.94
CTDNEP1-210ENST00000574322 SH2B2O14492 632 aaPredicted RBP33.44■■■□□ 2.94
CTDNEP1-210ENST00000574322 PPARAQ07869 468 aa33.44■■■□□ 2.94
CTDNEP1-210ENST00000574322 BRPF3Q9ULD4 1205 aa33.44■■■□□ 2.94
CTDNEP1-210ENST00000574322 CTDNEP1O95476 244 aa33.43■■■□□ 2.94
CTDNEP1-210ENST00000574322 DZIP1Q86YF9 867 aaKnown RBP33.43■■■□□ 2.94
CTDNEP1-210ENST00000574322 BCS1LQ9Y276 419 aa33.43■■■□□ 2.94
CTDNEP1-210ENST00000574322 JAK2O60674 1132 aa33.42■■■□□ 2.94
CTDNEP1-210ENST00000574322 GSTO1P78417 241 aa33.42■■■□□ 2.94
CTDNEP1-210ENST00000574322 NKX2-3Q8TAU0 364 aa33.42■■■□□ 2.94
CTDNEP1-210ENST00000574322 IGDCC4Q8TDY8 1250 aa33.42■■■□□ 2.94
CTDNEP1-210ENST00000574322 CRNKL1Q9BZJ0 848 aaKnown RBP33.42■■■□□ 2.94
CTDNEP1-210ENST00000574322 ATP8A2Q9NTI2 1148 aa33.42■■■□□ 2.94
CTDNEP1-210ENST00000574322 ZNF219Q9P2Y4 722 aaPredicted RBP33.42■■■□□ 2.94
CTDNEP1-210ENST00000574322 HPS5Q9UPZ3 1129 aa33.42■■■□□ 2.94
CTDNEP1-210ENST00000574322 KLF18A0A0U1RQI7 1052 aa33.41■■■□□ 2.94
CTDNEP1-210ENST00000574322 PCP11498 1178 aaKnown RBP33.41■■■□□ 2.94
CTDNEP1-210ENST00000574322 LIFRP42702 1097 aa33.41■■■□□ 2.94
CTDNEP1-210ENST00000574322 SGMS1Q86VZ5 419 aa33.41■■■□□ 2.94
CTDNEP1-210ENST00000574322 TMEM87AQ8NBN3 555 aa33.41■■■□□ 2.94
CTDNEP1-210ENST00000574322 PRPF40AO75400 957 aaKnown RBP33.4■■■□□ 2.94
CTDNEP1-210ENST00000574322 CHAMP1Q96JM3 812 aa33.4■■■□□ 2.94
CTDNEP1-210ENST00000574322 ZSWIM5Q9P217 1185 aa33.4■■■□□ 2.94
CTDNEP1-210ENST00000574322 KIF3AQ9Y496 699 aa33.4■■■□□ 2.94
CTDNEP1-210ENST00000574322 FAM205AQ6ZU69 1335 aa33.4■■■□□ 2.94
CTDNEP1-210ENST00000574322 C6orf229H3BNL8 230 aa33.39■■■□□ 2.94
CTDNEP1-210ENST00000574322 DHX16O60231 1041 aaKnown RBP33.39■■■□□ 2.94
CTDNEP1-210ENST00000574322 FGRP09769 529 aa33.39■■■□□ 2.94
CTDNEP1-210ENST00000574322 AATFQ9NY61 560 aaKnown RBP eCLIP33.39■■■□□ 2.94
CTDNEP1-210ENST00000574322 DTNBO60941 627 aa33.39■■■□□ 2.94
CTDNEP1-210ENST00000574322 PPP4CP60510 307 aa33.39■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms