RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 UBE2Q2Q8WVN8 375 aa20.7■□□□□ 0.9
CMTM3-214ENST00000567572 FGAP02671 866 aa20.69■□□□□ 0.9
CMTM3-214ENST00000567572 MAP3K12Q12852 859 aa20.69■□□□□ 0.9
CMTM3-214ENST00000567572 MB21D2Q8IYB1 491 aaPredicted RBP20.69■□□□□ 0.9
CMTM3-214ENST00000567572 CNBD1Q8NA66 436 aa20.69■□□□□ 0.9
CMTM3-214ENST00000567572 MAP7D2Q96T17 732 aa20.69■□□□□ 0.9
CMTM3-214ENST00000567572 CBX8Q9HC52 389 aa20.69■□□□□ 0.9
CMTM3-214ENST00000567572 COL1A1P02452 1464 aaPredicted RBP20.69■□□□□ 0.9
CMTM3-214ENST00000567572 WTIPA6NIX2 430 aaPredicted RBP20.68■□□□□ 0.9
CMTM3-214ENST00000567572 TXNRD1Q16881 649 aa20.68■□□□□ 0.9
CMTM3-214ENST00000567572 PROM2Q8N271 834 aa20.68■□□□□ 0.9
CMTM3-214ENST00000567572 NCOA7Q8NI08 942 aa20.68■□□□□ 0.9
CMTM3-214ENST00000567572 AP5Z1O43299 807 aa20.68■□□□□ 0.9
CMTM3-214ENST00000567572 GYG1P46976 350 aa20.68■□□□□ 0.9
CMTM3-214ENST00000567572 CCDC73Q6ZRK6 1079 aa20.68■□□□□ 0.9
CMTM3-214ENST00000567572 UQCRHLA0A096LP55 91 aa20.67■□□□□ 0.9
CMTM3-214ENST00000567572 NPHP1O15259 732 aa20.67■□□□□ 0.9
CMTM3-214ENST00000567572 UQCRHP07919 91 aa20.67■□□□□ 0.9
CMTM3-214ENST00000567572 CKAP2LQ8IYA6 745 aa20.67■□□□□ 0.9
CMTM3-214ENST00000567572 ANKRD2Q9GZV1 360 aa20.67■□□□□ 0.9
CMTM3-214ENST00000567572 TTC12Q9H892 705 aaPredicted RBP20.67■□□□□ 0.9
CMTM3-214ENST00000567572 GNL3LQ9NVN8 582 aaKnown RBP20.67■□□□□ 0.9
CMTM3-214ENST00000567572 HMGB2P26583 209 aaKnown RBP20.66■□□□□ 0.9
CMTM3-214ENST00000567572 CDC25BP30305 580 aa20.66■□□□□ 0.9
CMTM3-214ENST00000567572 PRR5LQ6MZQ0 368 aa20.66■□□□□ 0.9
CMTM3-214ENST00000567572 MTERF4Q7Z6M4 381 aaKnown RBP20.66■□□□□ 0.9
CMTM3-214ENST00000567572 RALYLQ86SE5 291 aaKnown RBP20.66■□□□□ 0.9
CMTM3-214ENST00000567572 MAGEB6Q8N7X4 407 aa20.66■□□□□ 0.9
CMTM3-214ENST00000567572 ZNF165P49910 485 aa20.66■□□□□ 0.9
CMTM3-214ENST00000567572 CCT2P78371 535 aaKnown RBP20.66■□□□□ 0.9
CMTM3-214ENST00000567572 PLCB2Q00722 1185 aa20.66■□□□□ 0.9
CMTM3-214ENST00000567572 FAM160A1Q05DH4 1040 aa20.66■□□□□ 0.9
CMTM3-214ENST00000567572 STX1AQ16623 288 aa20.66■□□□□ 0.9
CMTM3-214ENST00000567572 CAVIN4Q5BKX8 364 aa20.66■□□□□ 0.9
CMTM3-214ENST00000567572 BRAPQ7Z569 592 aa20.66■□□□□ 0.9
CMTM3-214ENST00000567572 KIAA1524Q8TCG1 905 aa20.66■□□□□ 0.9
CMTM3-214ENST00000567572 FAM84BQ96KN1 310 aaPredicted RBP20.66■□□□□ 0.9
CMTM3-214ENST00000567572 STRBPQ96SI9 672 aaKnown RBP20.66■□□□□ 0.9
CMTM3-214ENST00000567572 RTEL1Q9NZ71 1219 aa20.66■□□□□ 0.9
CMTM3-214ENST00000567572 ZMYM6O95789 1325 aa20.66■□□□□ 0.9
CMTM3-214ENST00000567572 A0A1W2PQ27 194 aa20.65■□□□□ 0.9
CMTM3-214ENST00000567572 A0A1W2PQ64 194 aa20.65■□□□□ 0.9
CMTM3-214ENST00000567572 A0A1W2PQD8 194 aa20.65■□□□□ 0.9
CMTM3-214ENST00000567572 PRC1O43663 620 aa20.65■□□□□ 0.9
CMTM3-214ENST00000567572 SARM1Q6SZW1 724 aa20.65■□□□□ 0.9
CMTM3-214ENST00000567572 LUZP1Q86V48 1076 aa20.65■□□□□ 0.9
CMTM3-214ENST00000567572 PLA2G4DQ86XP0 818 aa20.65■□□□□ 0.9
CMTM3-214ENST00000567572 USP28Q96RU2 1077 aa20.65■□□□□ 0.9
CMTM3-214ENST00000567572 ZNF213O14771 459 aa20.65■□□□□ 0.9
CMTM3-214ENST00000567572 FBXO33Q7Z6M2 555 aa20.65■□□□□ 0.9
CMTM3-214ENST00000567572 CCAR1Q8IX12 1150 aaKnown RBP20.65■□□□□ 0.9
CMTM3-214ENST00000567572 AIDAQ96BJ3 306 aa20.65■□□□□ 0.9
CMTM3-214ENST00000567572 PDCL3Q9H2J4 239 aa20.65■□□□□ 0.9
CMTM3-214ENST00000567572 KINO60870 393 aaKnown RBP20.64■□□□□ 0.89
CMTM3-214ENST00000567572 YEATS4O95619 227 aa20.64■□□□□ 0.89
CMTM3-214ENST00000567572 HAND2P61296 217 aa20.64■□□□□ 0.89
CMTM3-214ENST00000567572 GRAPQ13588 217 aa20.64■□□□□ 0.89
CMTM3-214ENST00000567572 GRAPLQ8TC17 118 aaPredicted RBP20.64■□□□□ 0.89
CMTM3-214ENST00000567572 NCOA5Q9HCD5 579 aaKnown RBP20.64■□□□□ 0.89
CMTM3-214ENST00000567572 IQSEC3Q9UPP2 1182 aaPredicted RBP20.64■□□□□ 0.89
CMTM3-214ENST00000567572 PLSCR1O15162 318 aa20.63■□□□□ 0.89
CMTM3-214ENST00000567572 FDPSP14324 419 aaKnown RBP20.63■□□□□ 0.89
CMTM3-214ENST00000567572 ENGASEQ8NFI3 743 aa20.63■□□□□ 0.89
CMTM3-214ENST00000567572 KCNG4Q8TDN1 519 aa20.63■□□□□ 0.89
CMTM3-214ENST00000567572 SEMA3EO15041 775 aa20.63■□□□□ 0.89
CMTM3-214ENST00000567572 KLRK1P26718 216 aa20.63■□□□□ 0.89
CMTM3-214ENST00000567572 ZNF75DP51815 510 aa20.63■□□□□ 0.89
CMTM3-214ENST00000567572 TRDNQ13061 729 aa20.63■□□□□ 0.89
CMTM3-214ENST00000567572 ALX1Q15699 326 aa20.63■□□□□ 0.89
CMTM3-214ENST00000567572 CRY2Q49AN0 593 aa20.63■□□□□ 0.89
CMTM3-214ENST00000567572 MYRIPQ8NFW9 859 aa20.63■□□□□ 0.89
CMTM3-214ENST00000567572 NBPF3Q9H094 633 aa20.63■□□□□ 0.89
CMTM3-214ENST00000567572 POLR3EQ9NVU0 708 aa20.63■□□□□ 0.89
CMTM3-214ENST00000567572 LRP2BPQ9P2M1 347 aa20.63■□□□□ 0.89
CMTM3-214ENST00000567572 DENND2AQ9ULE3 1009 aa20.63■□□□□ 0.89
CMTM3-214ENST00000567572 PDS5AQ29RF7 1337 aaKnown RBP20.62■□□□□ 0.89
CMTM3-214ENST00000567572 IRS2Q9Y4H2 1338 aa20.62■□□□□ 0.89
CMTM3-214ENST00000567572 KLF18A0A0U1RQI7 1052 aa20.62■□□□□ 0.89
CMTM3-214ENST00000567572 GOLGA8BA8MQT2 603 aa20.62■□□□□ 0.89
CMTM3-214ENST00000567572 MBD4O95243 580 aa20.62■□□□□ 0.89
CMTM3-214ENST00000567572 SERPINB2P05120 415 aa20.62■□□□□ 0.89
CMTM3-214ENST00000567572 GTF2F1P35269 517 aaKnown RBP eCLIP20.62■□□□□ 0.89
CMTM3-214ENST00000567572 SNW1Q13573 536 aaKnown RBP20.62■□□□□ 0.89
CMTM3-214ENST00000567572 DNTTIP2Q5QJE6 756 aaKnown RBP20.62■□□□□ 0.89
CMTM3-214ENST00000567572 ADALQ6DHV7 355 aa20.62■□□□□ 0.89
CMTM3-214ENST00000567572 ILDR1Q86SU0 546 aaPredicted RBP20.62■□□□□ 0.89
CMTM3-214ENST00000567572 VPS37DQ86XT2 251 aa20.62■□□□□ 0.89
CMTM3-214ENST00000567572 FBXO18Q8NFZ0 1043 aa20.62■□□□□ 0.89
CMTM3-214ENST00000567572 C8orf76Q96K31 380 aa20.62■□□□□ 0.89
CMTM3-214ENST00000567572 ZNF830Q96NB3 372 aaPredicted RBP20.62■□□□□ 0.89
CMTM3-214ENST00000567572 KCNF1Q9H3M0 494 aa20.62■□□□□ 0.89
CMTM3-214ENST00000567572 NAP1L2Q9ULW6 460 aaPredicted RBP20.62■□□□□ 0.89
CMTM3-214ENST00000567572 PNPLA7Q6ZV29 1317 aa20.62■□□□□ 0.89
CMTM3-214ENST00000567572 CACNA1SQ13698 1873 aa20.61■□□□□ 0.89
CMTM3-214ENST00000567572 ZBTB22O15209 634 aa20.61■□□□□ 0.89
CMTM3-214ENST00000567572 MRPS27Q92552 414 aaKnown RBP20.61■□□□□ 0.89
CMTM3-214ENST00000567572 ANO10Q9NW15 660 aa20.61■□□□□ 0.89
CMTM3-214ENST00000567572 HPS5Q9UPZ3 1129 aa20.61■□□□□ 0.89
CMTM3-214ENST00000567572 MYH13Q9UKX3 1938 aa20.61■□□□□ 0.89
CMTM3-214ENST00000567572 CDKL5O76039 1030 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms