RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 CRAMP1Q96RY5 1269 aa11.07□□□□□ -0.64
LINC00838-201ENST00000562956 HPS5Q9UPZ3 1129 aa11.07□□□□□ -0.64
LINC00838-201ENST00000562956 DNM1Q05193 864 aaKnown RBP11.07□□□□□ -0.64
LINC00838-201ENST00000562956 AKNAD1Q5T1N1 836 aa11.07□□□□□ -0.64
LINC00838-201ENST00000562956 MSL1Q68DK7 614 aa11.07□□□□□ -0.64
LINC00838-201ENST00000562956 CAVIN1Q6NZI2 390 aaKnown RBP11.07□□□□□ -0.64
LINC00838-201ENST00000562956 RAB11FIP4Q86YS3 637 aa11.07□□□□□ -0.64
LINC00838-201ENST00000562956 STK11IPQ8N1F8 1099 aa11.07□□□□□ -0.64
LINC00838-201ENST00000562956 TDRD7Q8NHU6 1098 aaKnown RBP11.07□□□□□ -0.64
LINC00838-201ENST00000562956 ATP6V1DQ9Y5K8 247 aa11.07□□□□□ -0.64
LINC00838-201ENST00000562956 FSD2A1L4K1 749 aa11.06□□□□□ -0.64
LINC00838-201ENST00000562956 GOLGA8BA8MQT2 603 aa11.06□□□□□ -0.64
LINC00838-201ENST00000562956 SMIM22K7EJ46 135 aa11.06□□□□□ -0.64
LINC00838-201ENST00000562956 SH2B2O14492 632 aaPredicted RBP11.06□□□□□ -0.64
LINC00838-201ENST00000562956 ZBTB22O15209 634 aa11.06□□□□□ -0.64
LINC00838-201ENST00000562956 GADD45BO75293 160 aaPredicted RBP11.06□□□□□ -0.64
LINC00838-201ENST00000562956 MMP10P09238 476 aa11.06□□□□□ -0.64
LINC00838-201ENST00000562956 PDIA4P13667 645 aaKnown RBP11.06□□□□□ -0.64
LINC00838-201ENST00000562956 C15orf52Q6ZUT6 534 aaKnown RBP11.06□□□□□ -0.64
LINC00838-201ENST00000562956 FLAD1Q8NFF5 587 aa11.06□□□□□ -0.64
LINC00838-201ENST00000562956 BRIP1Q9BX63 1249 aa11.06□□□□□ -0.64
LINC00838-201ENST00000562956 SENP2Q9HC62 589 aa11.06□□□□□ -0.64
LINC00838-201ENST00000562956 ZSWIM5Q9P217 1185 aa11.06□□□□□ -0.64
LINC00838-201ENST00000562956 GGA1Q9UJY5 639 aa11.06□□□□□ -0.64
LINC00838-201ENST00000562956 ANGEL1Q9UNK9 670 aaKnown RBP11.06□□□□□ -0.64
LINC00838-201ENST00000562956 SALL1Q9NSC2 1324 aa11.06□□□□□ -0.64
LINC00838-201ENST00000562956 KDM4AO75164 1064 aa11.06□□□□□ -0.64
LINC00838-201ENST00000562956 MFSD6Q6ZSS7 791 aa11.06□□□□□ -0.64
LINC00838-201ENST00000562956 ZNF804AQ7Z570 1209 aa11.06□□□□□ -0.64
LINC00838-201ENST00000562956 STAG1Q8WVM7 1258 aa11.06□□□□□ -0.64
LINC00838-201ENST00000562956 RBM27Q9P2N5 1060 aaKnown RBP11.06□□□□□ -0.64
LINC00838-201ENST00000562956 POLLQ9UGP5 575 aa11.06□□□□□ -0.64
LINC00838-201ENST00000562956 ATP2B4P23634 1241 aa11.05□□□□□ -0.64
LINC00838-201ENST00000562956 PPARAQ07869 468 aa11.05□□□□□ -0.64
LINC00838-201ENST00000562956 FAM173BQ6P4H8 233 aa11.05□□□□□ -0.64
LINC00838-201ENST00000562956 FAM184AQ8NB25 1140 aa11.05□□□□□ -0.64
LINC00838-201ENST00000562956 TMEM87AQ8NBN3 555 aa11.05□□□□□ -0.64
LINC00838-201ENST00000562956 IGDCC4Q8TDY8 1250 aa11.05□□□□□ -0.64
LINC00838-201ENST00000562956 AATFQ9NY61 560 aaKnown RBP eCLIP11.05□□□□□ -0.64
LINC00838-201ENST00000562956 PODXL2Q9NZ53 605 aa11.05□□□□□ -0.64
LINC00838-201ENST00000562956 GOLGA6L3A6NEY3 463 aa11.05□□□□□ -0.64
LINC00838-201ENST00000562956 MINDY4BA8MYZ0 360 aa11.05□□□□□ -0.64
LINC00838-201ENST00000562956 SRGNP10124 158 aa11.05□□□□□ -0.64
LINC00838-201ENST00000562956 HMGN5P82970 282 aaKnown RBP11.05□□□□□ -0.64
LINC00838-201ENST00000562956 GRIK5Q16478 980 aa11.05□□□□□ -0.64
LINC00838-201ENST00000562956 TBC1D16Q8TBP0 767 aa11.05□□□□□ -0.64
LINC00838-201ENST00000562956 CNNM2Q9H8M5 875 aa11.05□□□□□ -0.64
LINC00838-201ENST00000562956 CYP2D7A0A087X1C5 515 aa11.05□□□□□ -0.64
LINC00838-201ENST00000562956 PPEF1O14829 653 aaPredicted RBP11.05□□□□□ -0.64
LINC00838-201ENST00000562956 FIBPO43427 364 aa11.05□□□□□ -0.64
LINC00838-201ENST00000562956 RRP12Q5JTH9 1297 aaKnown RBP11.05□□□□□ -0.64
LINC00838-201ENST00000562956 GAS2L3Q86XJ1 694 aa11.05□□□□□ -0.64
LINC00838-201ENST00000562956 WDR66Q8TBY9 1149 aa11.05□□□□□ -0.64
LINC00838-201ENST00000562956 KRT23Q9C075 422 aa11.05□□□□□ -0.64
LINC00838-201ENST00000562956 LY9Q9HBG7 655 aa11.05□□□□□ -0.64
LINC00838-201ENST00000562956 CD209Q9NNX6 404 aa11.05□□□□□ -0.64
LINC00838-201ENST00000562956 FDPSP14324 419 aaKnown RBP11.04□□□□□ -0.64
LINC00838-201ENST00000562956 FOSBP53539 338 aa11.04□□□□□ -0.64
LINC00838-201ENST00000562956 SPTY2D1Q68D10 685 aaPredicted RBP11.04□□□□□ -0.64
LINC00838-201ENST00000562956 DZIP1Q86YF9 867 aaKnown RBP11.04□□□□□ -0.64
LINC00838-201ENST00000562956 TIAM2Q8IVF5 1701 aa11.04□□□□□ -0.64
LINC00838-201ENST00000562956 TMEM87BQ96K49 555 aa11.04□□□□□ -0.64
LINC00838-201ENST00000562956 TNS1Q9HBL0 1735 aaKnown RBP11.04□□□□□ -0.64
LINC00838-201ENST00000562956 TOMM22Q9NS69 142 aa11.04□□□□□ -0.64
LINC00838-201ENST00000562956 PARP3Q9Y6F1 533 aa11.04□□□□□ -0.64
LINC00838-201ENST00000562956 H3BQV1 296 aa11.04□□□□□ -0.64
LINC00838-201ENST00000562956 MBD3O95983 291 aa11.04□□□□□ -0.64
LINC00838-201ENST00000562956 LDHBP07195 334 aaKnown RBP11.04□□□□□ -0.64
LINC00838-201ENST00000562956 EZH2Q15910 746 aaKnown RBP11.04□□□□□ -0.64
LINC00838-201ENST00000562956 ZSCAN23Q3MJ62 389 aa11.04□□□□□ -0.64
LINC00838-201ENST00000562956 TMEM67Q5HYA8 995 aa11.04□□□□□ -0.64
LINC00838-201ENST00000562956 IFFO2Q5TF58 517 aa11.04□□□□□ -0.64
LINC00838-201ENST00000562956 OLFM4Q6UX06 510 aa11.04□□□□□ -0.64
LINC00838-201ENST00000562956 TMEM63CQ9P1W3 806 aa11.04□□□□□ -0.64
LINC00838-201ENST00000562956 ANAPC4Q9UJX5 808 aa11.04□□□□□ -0.64
LINC00838-201ENST00000562956 RXRAP19793 462 aa11.03□□□□□ -0.64
LINC00838-201ENST00000562956 EN1Q05925 392 aaPredicted RBP11.03□□□□□ -0.64
LINC00838-201ENST00000562956 CTR9Q6PD62 1173 aa11.03□□□□□ -0.64
LINC00838-201ENST00000562956 APOA5Q6Q788 366 aa11.03□□□□□ -0.64
LINC00838-201ENST00000562956 SP8Q8IXZ3 490 aa11.03□□□□□ -0.64
LINC00838-201ENST00000562956 ZKSCAN3Q9BRR0 538 aa11.03□□□□□ -0.64
LINC00838-201ENST00000562956 C6orf229H3BNL8 230 aa11.03□□□□□ -0.64
LINC00838-201ENST00000562956 IFIT3O14879 490 aaKnown RBP11.03□□□□□ -0.64
LINC00838-201ENST00000562956 XRCC6P12956 609 aaKnown RBP eCLIP11.03□□□□□ -0.64
LINC00838-201ENST00000562956 IL1R1P14778 569 aa11.03□□□□□ -0.64
LINC00838-201ENST00000562956 NPR1P16066 1061 aa11.03□□□□□ -0.64
LINC00838-201ENST00000562956 EVX2Q03828 476 aa11.03□□□□□ -0.64
LINC00838-201ENST00000562956 CAMKK2Q96RR4 588 aa11.03□□□□□ -0.64
LINC00838-201ENST00000562956 ATP6V0A2Q9Y487 856 aa11.03□□□□□ -0.64
LINC00838-201ENST00000562956 NRXN2Q9P2S2 1712 aa11.03□□□□□ -0.64
LINC00838-201ENST00000562956 DHX16O60231 1041 aaKnown RBP11.02□□□□□ -0.64
LINC00838-201ENST00000562956 RESTQ13127 1097 aa11.02□□□□□ -0.64
LINC00838-201ENST00000562956 DIXDC1Q155Q3 683 aa11.02□□□□□ -0.64
LINC00838-201ENST00000562956 TPRNQ4KMQ1 711 aa11.02□□□□□ -0.64
LINC00838-201ENST00000562956 GIMAP6Q6P9H5 292 aa11.02□□□□□ -0.64
LINC00838-201ENST00000562956 NFXL1Q6ZNB6 911 aa11.02□□□□□ -0.64
LINC00838-201ENST00000562956 SGMS1Q86VZ5 419 aa11.02□□□□□ -0.64
LINC00838-201ENST00000562956 CHMP4CQ96CF2 233 aa11.02□□□□□ -0.64
LINC00838-201ENST00000562956 MYL10Q9BUA6 226 aa11.02□□□□□ -0.64
LINC00838-201ENST00000562956 CRNKL1Q9BZJ0 848 aaKnown RBP11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms