RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 PTGER2P43116 358 aa16.97■□□□□ 0.31
RABGGTA-212ENST00000559974 TRDNQ13061 729 aa16.97■□□□□ 0.31
RABGGTA-212ENST00000559974 TPTE2Q6XPS3 522 aa16.97■□□□□ 0.31
RABGGTA-212ENST00000559974 SLC16A10Q8TF71 515 aa16.97■□□□□ 0.31
RABGGTA-212ENST00000559974 STRBPQ96SI9 672 aaKnown RBP16.97■□□□□ 0.31
RABGGTA-212ENST00000559974 SGIP1Q9BQI5 828 aa16.97■□□□□ 0.31
RABGGTA-212ENST00000559974 MTFR1LQ9H019 292 aa16.97■□□□□ 0.31
RABGGTA-212ENST00000559974 ZMYM6O95789 1325 aa16.97■□□□□ 0.31
RABGGTA-212ENST00000559974 KLF18A0A0U1RQI7 1052 aa16.96■□□□□ 0.31
RABGGTA-212ENST00000559974 NPHP1O15259 732 aa16.96■□□□□ 0.31
RABGGTA-212ENST00000559974 DHX16O60231 1041 aaKnown RBP16.96■□□□□ 0.31
RABGGTA-212ENST00000559974 GOLGA8BA8MQT2 603 aa16.95■□□□□ 0.3
RABGGTA-212ENST00000559974 FOSBP53539 338 aa16.95■□□□□ 0.3
RABGGTA-212ENST00000559974 CHRNDQ07001 517 aa16.95■□□□□ 0.3
RABGGTA-212ENST00000559974 TBC1D10CQ8IV04 446 aa16.95■□□□□ 0.3
RABGGTA-212ENST00000559974 MAGEB6Q8N7X4 407 aa16.95■□□□□ 0.3
RABGGTA-212ENST00000559974 CDC5LQ99459 802 aaKnown RBP16.95■□□□□ 0.3
RABGGTA-212ENST00000559974 NYXQ9GZU5 481 aa16.95■□□□□ 0.3
RABGGTA-212ENST00000559974 NUP62CLQ9H1M0 184 aa16.95■□□□□ 0.3
RABGGTA-212ENST00000559974 TIAM2Q8IVF5 1701 aa16.95■□□□□ 0.3
RABGGTA-212ENST00000559974 ALX1Q15699 326 aa16.95■□□□□ 0.3
RABGGTA-212ENST00000559974 HPS5Q9UPZ3 1129 aa16.95■□□□□ 0.3
RABGGTA-212ENST00000559974 FDPSP14324 419 aaKnown RBP16.94■□□□□ 0.3
RABGGTA-212ENST00000559974 ADD1P35611 737 aaKnown RBP16.94■□□□□ 0.3
RABGGTA-212ENST00000559974 BCAMP50895 628 aa16.94■□□□□ 0.3
RABGGTA-212ENST00000559974 MAP3K11Q16584 847 aa16.94■□□□□ 0.3
RABGGTA-212ENST00000559974 SLC10A5Q5PT55 438 aa16.94■□□□□ 0.3
RABGGTA-212ENST00000559974 PGBD1Q96JS3 809 aa16.94■□□□□ 0.3
RABGGTA-212ENST00000559974 DDX19AQ9NUU7 478 aaKnown RBP16.94■□□□□ 0.3
RABGGTA-212ENST00000559974 PATL2C9JE40 543 aaKnown RBP16.93■□□□□ 0.3
RABGGTA-212ENST00000559974 CCDC192P0DO97 292 aa16.93■□□□□ 0.3
RABGGTA-212ENST00000559974 ATL3Q6DD88 541 aa16.93■□□□□ 0.3
RABGGTA-212ENST00000559974 DACT1Q9NYF0 836 aa16.93■□□□□ 0.3
RABGGTA-212ENST00000559974 ECM29Q5VYK3 1845 aa16.93■□□□□ 0.3
RABGGTA-212ENST00000559974 CACNA1SQ13698 1873 aa16.93■□□□□ 0.3
RABGGTA-212ENST00000559974 MBD4O95243 580 aa16.93■□□□□ 0.3
RABGGTA-212ENST00000559974 MSNP26038 577 aaKnown RBP16.93■□□□□ 0.3
RABGGTA-212ENST00000559974 SF3B3Q15393 1217 aaKnown RBP16.93■□□□□ 0.3
RABGGTA-212ENST00000559974 BICD2Q8TD16 824 aa16.93■□□□□ 0.3
RABGGTA-212ENST00000559974 NOL7Q9UMY1 257 aaKnown RBP16.93■□□□□ 0.3
RABGGTA-212ENST00000559974 ANGEL1Q9UNK9 670 aaKnown RBP16.93■□□□□ 0.3
RABGGTA-212ENST00000559974 PPFIA3O75145 1194 aa16.92■□□□□ 0.3
RABGGTA-212ENST00000559974 ZNF396Q96N95 335 aaPredicted RBP16.92■□□□□ 0.3
RABGGTA-212ENST00000559974 EPB41L4AQ9HCS5 686 aaPredicted RBP16.92■□□□□ 0.3
RABGGTA-212ENST00000559974 CCDC39Q9UFE4 941 aa16.92■□□□□ 0.3
RABGGTA-212ENST00000559974 MYH13Q9UKX3 1938 aa16.92■□□□□ 0.3
RABGGTA-212ENST00000559974 SH2B2O14492 632 aaPredicted RBP16.91■□□□□ 0.3
RABGGTA-212ENST00000559974 CPLX1O14810 134 aa16.91■□□□□ 0.3
RABGGTA-212ENST00000559974 CHRNA5P30532 468 aa16.91■□□□□ 0.3
RABGGTA-212ENST00000559974 ST5P78524 1137 aa16.91■□□□□ 0.3
RABGGTA-212ENST00000559974 GUCY1B3Q02153 619 aa16.91■□□□□ 0.3
RABGGTA-212ENST00000559974 CYB5R4Q7L1T6 521 aa16.91■□□□□ 0.3
RABGGTA-212ENST00000559974 ANKRD18AQ8IVF6 992 aa16.91■□□□□ 0.3
RABGGTA-212ENST00000559974 IFNL3Q8IZI9 196 aa16.91■□□□□ 0.3
RABGGTA-212ENST00000559974 NAPBQ9H115 298 aa16.91■□□□□ 0.3
RABGGTA-212ENST00000559974 TNMDQ9H2S6 317 aa16.91■□□□□ 0.3
RABGGTA-212ENST00000559974 RCOR1Q9UKL0 485 aa16.91■□□□□ 0.3
RABGGTA-212ENST00000559974 DENND2AQ9ULE3 1009 aa16.91■□□□□ 0.3
RABGGTA-212ENST00000559974 KIAA1551Q9HCM1 1747 aa16.91■□□□□ 0.3
RABGGTA-212ENST00000559974 CLSTN2Q9H4D0 955 aa16.91■□□□□ 0.3
RABGGTA-212ENST00000559974 ARMT1Q9H993 441 aa16.91■□□□□ 0.3
RABGGTA-212ENST00000559974 C10orf71Q711Q0 1435 aa16.91■□□□□ 0.3
RABGGTA-212ENST00000559974 KIF13BQ9NQT8 1826 aa16.9■□□□□ 0.3
RABGGTA-212ENST00000559974 ZNF804BA4D1E1 1349 aa16.9■□□□□ 0.3
RABGGTA-212ENST00000559974 NEDD4P46934 1319 aa16.9■□□□□ 0.3
RABGGTA-212ENST00000559974 NR1I2O75469 434 aa16.9■□□□□ 0.3
RABGGTA-212ENST00000559974 GNAT2P19087 354 aa16.9■□□□□ 0.3
RABGGTA-212ENST00000559974 CEBPZQ03701 1054 aaKnown RBP16.9■□□□□ 0.3
RABGGTA-212ENST00000559974 CAMK4Q16566 473 aa16.9■□□□□ 0.3
RABGGTA-212ENST00000559974 RBM43Q6ZSC3 357 aaKnown RBP16.9■□□□□ 0.3
RABGGTA-212ENST00000559974 NKX2-3Q8TAU0 364 aa16.9■□□□□ 0.3
RABGGTA-212ENST00000559974 C8orf76Q96K31 380 aa16.9■□□□□ 0.3
RABGGTA-212ENST00000559974 TMEM87BQ96K49 555 aa16.9■□□□□ 0.3
RABGGTA-212ENST00000559974 USP28Q96RU2 1077 aa16.9■□□□□ 0.3
RABGGTA-212ENST00000559974 ORC3Q9UBD5 711 aaPredicted RBP16.9■□□□□ 0.3
RABGGTA-212ENST00000559974 USP25Q9UHP3 1055 aa16.9■□□□□ 0.3
RABGGTA-212ENST00000559974 B4E1Z4 1266 aa16.89■□□□□ 0.3
RABGGTA-212ENST00000559974 RAB11FIP4Q86YS3 637 aa16.89■□□□□ 0.3
RABGGTA-212ENST00000559974 BSDC1Q9NW68 430 aaPredicted RBP16.89■□□□□ 0.3
RABGGTA-212ENST00000559974 GSG1L2A8MUP6 293 aa16.89■□□□□ 0.29
RABGGTA-212ENST00000559974 CELF1Q92879 486 aaKnown RBP16.89■□□□□ 0.29
RABGGTA-212ENST00000559974 NLRP3Q96P20 1036 aa16.89■□□□□ 0.29
RABGGTA-212ENST00000559974 FTOQ9C0B1 505 aaKnown RBP eCLIP16.89■□□□□ 0.29
RABGGTA-212ENST00000559974 LRP2BPQ9P2M1 347 aa16.89■□□□□ 0.29
RABGGTA-212ENST00000559974 PPP1R1BQ9UD71 204 aaPredicted RBP16.89■□□□□ 0.29
RABGGTA-212ENST00000559974 KDM4AO75164 1064 aa16.88■□□□□ 0.29
RABGGTA-212ENST00000559974 METAP2P50579 478 aaKnown RBP eCLIP16.88■□□□□ 0.29
RABGGTA-212ENST00000559974 TYRO3Q06418 890 aa16.88■□□□□ 0.29
RABGGTA-212ENST00000559974 UBE4AQ14139 1066 aa16.88■□□□□ 0.29
RABGGTA-212ENST00000559974 LCORLQ8N3X6 602 aa16.88■□□□□ 0.29
RABGGTA-212ENST00000559974 RGS22Q8NE09 1264 aa16.88■□□□□ 0.29
RABGGTA-212ENST00000559974 FBXO18Q8NFZ0 1043 aa16.88■□□□□ 0.29
RABGGTA-212ENST00000559974 BRIP1Q9BX63 1249 aa16.88■□□□□ 0.29
RABGGTA-212ENST00000559974 NACAP1Q9BZK3 213 aa16.88■□□□□ 0.29
RABGGTA-212ENST00000559974 GNL3LQ9NVN8 582 aaKnown RBP16.88■□□□□ 0.29
RABGGTA-212ENST00000559974 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.88■□□□□ 0.29
RABGGTA-212ENST00000559974 ZKSCAN5Q9Y2L8 839 aa16.88■□□□□ 0.29
RABGGTA-212ENST00000559974 POLD1P28340 1107 aa16.88■□□□□ 0.29
RABGGTA-212ENST00000559974 CKAP2LQ8IYA6 745 aa16.88■□□□□ 0.29
RABGGTA-212ENST00000559974 IGDCC4Q8TDY8 1250 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 146.6 ms