RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 FAM177BA6PVY3 158 aa7.79□□□□□ -1.16
SCAF11-214ENST00000550893 ALX3O95076 343 aa7.79□□□□□ -1.16
SCAF11-214ENST00000550893 ITGB7P26010 798 aa7.79□□□□□ -1.16
SCAF11-214ENST00000550893 CD68P34810 354 aaPredicted RBP7.79□□□□□ -1.16
SCAF11-214ENST00000550893 FOXD4L6Q3SYB3 417 aaPredicted RBP7.79□□□□□ -1.16
SCAF11-214ENST00000550893 FAM117BQ6P1L5 589 aa7.79□□□□□ -1.16
SCAF11-214ENST00000550893 FOXD4L3Q6VB84 417 aaPredicted RBP7.79□□□□□ -1.16
SCAF11-214ENST00000550893 TMEM130Q8N3G9 435 aa7.79□□□□□ -1.16
SCAF11-214ENST00000550893 CITED4Q96RK1 184 aa7.79□□□□□ -1.16
SCAF11-214ENST00000550893 AKTIPQ9H8T0 292 aa7.79□□□□□ -1.16
SCAF11-214ENST00000550893 CCNB3Q8WWL7 1395 aa7.79□□□□□ -1.16
SCAF11-214ENST00000550893 A2MP01023 1474 aa7.79□□□□□ -1.16
SCAF11-214ENST00000550893 F8W735 103 aaPredicted RBP7.78□□□□□ -1.16
SCAF11-214ENST00000550893 H3BRJ5 948 aa7.78□□□□□ -1.16
SCAF11-214ENST00000550893 CABP4P57796 275 aa7.78□□□□□ -1.16
SCAF11-214ENST00000550893 PDE3BQ13370 1112 aa7.78□□□□□ -1.16
SCAF11-214ENST00000550893 USPL1Q5W0Q7 1092 aa7.78□□□□□ -1.16
SCAF11-214ENST00000550893 KLHL23Q8NBE8 558 aa7.78□□□□□ -1.16
SCAF11-214ENST00000550893 TP53INP1Q96A56 240 aa7.78□□□□□ -1.16
SCAF11-214ENST00000550893 KLHDC7BQ96G42 594 aa7.78□□□□□ -1.16
SCAF11-214ENST00000550893 MEGF10Q96KG7 1140 aa7.78□□□□□ -1.16
SCAF11-214ENST00000550893 SOX13Q9UN79 622 aa7.78□□□□□ -1.16
SCAF11-214ENST00000550893 CDK11AQ9UQ88 783 aaPredicted RBP7.78□□□□□ -1.16
SCAF11-214ENST00000550893 VWDEQ8N2E2 1590 aa7.77□□□□□ -1.17
SCAF11-214ENST00000550893 DDX3YO15523 660 aaKnown RBP7.77□□□□□ -1.17
SCAF11-214ENST00000550893 DYRK3O43781 588 aa7.77□□□□□ -1.17
SCAF11-214ENST00000550893 WISP1O95388 367 aa7.77□□□□□ -1.17
SCAF11-214ENST00000550893 IGHA2P01877 340 aa7.77□□□□□ -1.17
SCAF11-214ENST00000550893 ORC1Q13415 861 aa7.77□□□□□ -1.17
SCAF11-214ENST00000550893 GALNT12Q8IXK2 581 aa7.77□□□□□ -1.17
SCAF11-214ENST00000550893 AGGF1Q8N302 714 aaeCLIP7.77□□□□□ -1.17
SCAF11-214ENST00000550893 BSNDQ8WZ55 320 aa7.77□□□□□ -1.17
SCAF11-214ENST00000550893 SEC31BQ9NQW1 1179 aa7.77□□□□□ -1.17
SCAF11-214ENST00000550893 PRDM15P57071 1507 aaPredicted RBP7.77□□□□□ -1.17
SCAF11-214ENST00000550893 RTEL1-TNFRSF6BF6WH68 1400 aa7.77□□□□□ -1.17
SCAF11-214ENST00000550893 SETD1BQ9UPS6 1966 aaKnown RBP7.77□□□□□ -1.17
SCAF11-214ENST00000550893 ZC3H13Q5T200 1668 aaKnown RBP7.76□□□□□ -1.17
SCAF11-214ENST00000550893 SHANK2Q9UPX8 1470 aa7.76□□□□□ -1.17
SCAF11-214ENST00000550893 GPR182O15218 404 aa7.76□□□□□ -1.17
SCAF11-214ENST00000550893 NEFLP07196 543 aa7.76□□□□□ -1.17
SCAF11-214ENST00000550893 HNRNPMP52272 730 aaKnown RBP eCLIP7.76□□□□□ -1.17
SCAF11-214ENST00000550893 PIP4K2BP78356 416 aa7.76□□□□□ -1.17
SCAF11-214ENST00000550893 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.76□□□□□ -1.17
SCAF11-214ENST00000550893 TMC1Q8TDI8 760 aa7.76□□□□□ -1.17
SCAF11-214ENST00000550893 ASAP3Q8TDY4 903 aa7.76□□□□□ -1.17
SCAF11-214ENST00000550893 BHLHE41Q9C0J9 482 aaPredicted RBP7.76□□□□□ -1.17
SCAF11-214ENST00000550893 CAMSAP1Q5T5Y3 1602 aa7.76□□□□□ -1.17
SCAF11-214ENST00000550893 NEURL4Q96JN8 1562 aa7.76□□□□□ -1.17
SCAF11-214ENST00000550893 ABCC3O15438 1527 aa7.75□□□□□ -1.17
SCAF11-214ENST00000550893 KDM5DQ9BY66 1539 aa7.75□□□□□ -1.17
SCAF11-214ENST00000550893 FAM135AQ9P2D6 1515 aa7.75□□□□□ -1.17
SCAF11-214ENST00000550893 A0A1W2PP55 124 aa7.75□□□□□ -1.17
SCAF11-214ENST00000550893 ADAM11O75078 769 aa7.75□□□□□ -1.17
SCAF11-214ENST00000550893 HGSNATQ68CP4 663 aa7.75□□□□□ -1.17
SCAF11-214ENST00000550893 VN1R5Q7Z5H4 357 aa7.75□□□□□ -1.17
SCAF11-214ENST00000550893 FOXD4L4Q8WXT5 416 aaPredicted RBP7.75□□□□□ -1.17
SCAF11-214ENST00000550893 SLC7A3Q8WY07 619 aa7.75□□□□□ -1.17
SCAF11-214ENST00000550893 WNT8BQ93098 351 aa7.75□□□□□ -1.17
SCAF11-214ENST00000550893 NIF3L1Q9GZT8 377 aa7.75□□□□□ -1.17
SCAF11-214ENST00000550893 OSGEPQ9NPF4 335 aa7.75□□□□□ -1.17
SCAF11-214ENST00000550893 BIN2Q9UBW5 565 aaPredicted RBP7.75□□□□□ -1.17
SCAF11-214ENST00000550893 ABCC5O15440 1437 aa7.75□□□□□ -1.17
SCAF11-214ENST00000550893 FGD6Q6ZV73 1430 aa7.75□□□□□ -1.17
SCAF11-214ENST00000550893 MIA2Q96PC5 1412 aa7.75□□□□□ -1.17
SCAF11-214ENST00000550893 METTL12A8MUP2 240 aa7.74□□□□□ -1.17
SCAF11-214ENST00000550893 CPNE3O75131 537 aaKnown RBP7.74□□□□□ -1.17
SCAF11-214ENST00000550893 H2AFB1P0C5Y9 115 aa7.74□□□□□ -1.17
SCAF11-214ENST00000550893 H2AFB2P0C5Z0 115 aa7.74□□□□□ -1.17
SCAF11-214ENST00000550893 ACAD11Q709F0 780 aa7.74□□□□□ -1.17
SCAF11-214ENST00000550893 DZIP1LQ8IYY4 767 aaKnown RBP7.74□□□□□ -1.17
SCAF11-214ENST00000550893 UBASH3BQ8TF42 649 aa7.74□□□□□ -1.17
SCAF11-214ENST00000550893 RBCK1Q9BYM8 510 aa7.74□□□□□ -1.17
SCAF11-214ENST00000550893 PTPRKQ15262 1439 aa7.74□□□□□ -1.17
SCAF11-214ENST00000550893 CEP170BQ9Y4F5 1589 aaPredicted RBP7.74□□□□□ -1.17
SCAF11-214ENST00000550893 POLR1AO95602 1720 aaPredicted RBP7.73□□□□□ -1.17
SCAF11-214ENST00000550893 SOX1O00570 391 aaPredicted RBP7.73□□□□□ -1.17
SCAF11-214ENST00000550893 GLB1P16278 677 aa7.73□□□□□ -1.17
SCAF11-214ENST00000550893 DUOXA2Q1HG44 320 aa7.73□□□□□ -1.17
SCAF11-214ENST00000550893 Q6ZS46 218 aa7.73□□□□□ -1.17
SCAF11-214ENST00000550893 KIAA1211Q6ZU35 1233 aa7.73□□□□□ -1.17
SCAF11-214ENST00000550893 IVNS1ABPQ9Y6Y0 642 aa7.73□□□□□ -1.17
SCAF11-214ENST00000550893 ADGRL2O95490 1459 aa7.73□□□□□ -1.17
SCAF11-214ENST00000550893 SPATA31D1Q6ZQQ2 1576 aa7.72□□□□□ -1.17
SCAF11-214ENST00000550893 ARL4DP49703 201 aa7.72□□□□□ -1.17
SCAF11-214ENST00000550893 CEBPAP49715 358 aaPredicted RBP7.72□□□□□ -1.17
SCAF11-214ENST00000550893 NLRP12P59046 1061 aa7.72□□□□□ -1.17
SCAF11-214ENST00000550893 C19orf57Q0VDD7 668 aa7.72□□□□□ -1.17
SCAF11-214ENST00000550893 IKBKEQ14164 716 aa7.72□□□□□ -1.17
SCAF11-214ENST00000550893 CCNJLQ8IV13 435 aa7.72□□□□□ -1.17
SCAF11-214ENST00000550893 DMRTB1Q96MA1 342 aa7.72□□□□□ -1.17
SCAF11-214ENST00000550893 TCF12Q99081 682 aa7.72□□□□□ -1.17
SCAF11-214ENST00000550893 LIN7BQ9HAP6 207 aa7.72□□□□□ -1.17
SCAF11-214ENST00000550893 NPHS2Q9NP85 383 aa7.72□□□□□ -1.17
SCAF11-214ENST00000550893 CFDP1Q9UEE9 299 aaPredicted RBP7.72□□□□□ -1.17
SCAF11-214ENST00000550893 DCTN4Q9UJW0 460 aa7.72□□□□□ -1.17
SCAF11-214ENST00000550893 SPAG9O60271 1321 aaKnown RBP7.72□□□□□ -1.17
SCAF11-214ENST00000550893 STRCP1A6NGW2 1772 aa7.71□□□□□ -1.17
SCAF11-214ENST00000550893 LTBP4Q8N2S1 1624 aa7.71□□□□□ -1.17
SCAF11-214ENST00000550893 DAPK1P53355 1430 aa7.71□□□□□ -1.17
SCAF11-214ENST00000550893 NPATQ14207 1427 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms