RNA–Protein interactions for RNA: ENST00000545021.2

LYSMD4-210, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,431 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-210ENST00000545021 HNRNPH1P31943 449 aaKnown RBP22.08■■□□□ 1.12
LYSMD4-210ENST00000545021 COL9A3Q14050 684 aaPredicted RBP22.08■■□□□ 1.12
LYSMD4-210ENST00000545021 SDF4Q9BRK5 362 aa22.08■■□□□ 1.12
LYSMD4-210ENST00000545021 CCDC189A1A4V9 331 aa22.07■■□□□ 1.12
LYSMD4-210ENST00000545021 CUTAO60888 179 aa22.07■■□□□ 1.12
LYSMD4-210ENST00000545021 UBTFL1P0CB47 393 aaPredicted RBP22.07■■□□□ 1.12
LYSMD4-210ENST00000545021 STK31Q9BXU1 1019 aa22.07■■□□□ 1.12
LYSMD4-210ENST00000545021 GBP3Q9H0R5 595 aa22.07■■□□□ 1.12
LYSMD4-210ENST00000545021 FAM204AQ9H8W3 233 aa22.07■■□□□ 1.12
LYSMD4-210ENST00000545021 FLIIQ13045 1269 aa22.07■■□□□ 1.12
LYSMD4-210ENST00000545021 STK3Q13188 491 aa22.07■■□□□ 1.12
LYSMD4-210ENST00000545021 CASP8Q14790 479 aa22.07■■□□□ 1.12
LYSMD4-210ENST00000545021 NAA16Q6N069 864 aaPredicted RBP22.07■■□□□ 1.12
LYSMD4-210ENST00000545021 CNPY4Q8N129 248 aa22.07■■□□□ 1.12
LYSMD4-210ENST00000545021 MRPS27Q92552 414 aaKnown RBP22.07■■□□□ 1.12
LYSMD4-210ENST00000545021 ZNF396Q96N95 335 aaPredicted RBP22.07■■□□□ 1.12
LYSMD4-210ENST00000545021 ABCB6Q9NP58 842 aa22.07■■□□□ 1.12
LYSMD4-210ENST00000545021 NLRP12P59046 1061 aa22.06■■□□□ 1.12
LYSMD4-210ENST00000545021 CEP112Q8N8E3 955 aa22.06■■□□□ 1.12
LYSMD4-210ENST00000545021 MARCH10Q8NA82 808 aaPredicted RBP22.06■■□□□ 1.12
LYSMD4-210ENST00000545021 CCDC102AQ96A19 550 aa22.06■■□□□ 1.12
LYSMD4-210ENST00000545021 USP44Q9H0E7 712 aa22.06■■□□□ 1.12
LYSMD4-210ENST00000545021 A1CFQ9NQ94 594 aaKnown RBP22.06■■□□□ 1.12
LYSMD4-210ENST00000545021 RRS1Q15050 365 aaKnown RBP22.06■■□□□ 1.12
LYSMD4-210ENST00000545021 VSTM4Q8IW00 320 aa22.06■■□□□ 1.12
LYSMD4-210ENST00000545021 PNKPQ96T60 521 aa22.06■■□□□ 1.12
LYSMD4-210ENST00000545021 SNRKQ9NRH2 765 aa22.06■■□□□ 1.12
LYSMD4-210ENST00000545021 PPP1R42Q7Z4L9 355 aa22.05■■□□□ 1.12
LYSMD4-210ENST00000545021 TCEANC2Q96MN5 208 aa22.05■■□□□ 1.12
LYSMD4-210ENST00000545021 USP28Q96RU2 1077 aa22.05■■□□□ 1.12
LYSMD4-210ENST00000545021 KCNV1Q6PIU1 500 aa22.05■■□□□ 1.12
LYSMD4-210ENST00000545021 FTOQ9C0B1 505 aaKnown RBP eCLIP22.05■■□□□ 1.12
LYSMD4-210ENST00000545021 MEGF6O75095 1541 aa22.05■■□□□ 1.12
LYSMD4-210ENST00000545021 TUBBP07437 444 aa22.04■■□□□ 1.12
LYSMD4-210ENST00000545021 ME1P48163 572 aa22.04■■□□□ 1.12
LYSMD4-210ENST00000545021 PLEKHO1Q53GL0 409 aaPredicted RBP22.04■■□□□ 1.12
LYSMD4-210ENST00000545021 AFAP1L1Q8TED9 768 aa22.04■■□□□ 1.12
LYSMD4-210ENST00000545021 STAG1Q8WVM7 1258 aa22.04■■□□□ 1.12
LYSMD4-210ENST00000545021 PLEKHA4Q9H4M7 779 aa22.04■■□□□ 1.12
LYSMD4-210ENST00000545021 A0A1W2PQ27 194 aa22.04■■□□□ 1.12
LYSMD4-210ENST00000545021 A0A1W2PQ64 194 aa22.04■■□□□ 1.12
LYSMD4-210ENST00000545021 A0A1W2PQD8 194 aa22.04■■□□□ 1.12
LYSMD4-210ENST00000545021 C21orf2O43822 256 aa22.04■■□□□ 1.12
LYSMD4-210ENST00000545021 LMOD1P29536 600 aaPredicted RBP22.04■■□□□ 1.12
LYSMD4-210ENST00000545021 UBASH3AP57075 661 aa22.04■■□□□ 1.12
LYSMD4-210ENST00000545021 EGFL6Q8IUX8 553 aa22.04■■□□□ 1.12
LYSMD4-210ENST00000545021 HSD3B7Q9H2F3 369 aa22.04■■□□□ 1.12
LYSMD4-210ENST00000545021 TOP1P11387 765 aaKnown RBP22.03■■□□□ 1.12
LYSMD4-210ENST00000545021 CCDC12Q8WUD4 166 aaPredicted RBP22.03■■□□□ 1.12
LYSMD4-210ENST00000545021 FMNL2Q96PY5 1086 aa22.03■■□□□ 1.12
LYSMD4-210ENST00000545021 CAMKK2Q96RR4 588 aa22.03■■□□□ 1.12
LYSMD4-210ENST00000545021 NEDD4P46934 1319 aa22.03■■□□□ 1.12
LYSMD4-210ENST00000545021 LRP5O75197 1615 aa22.03■■□□□ 1.12
LYSMD4-210ENST00000545021 STX10O60499 249 aa22.02■■□□□ 1.12
LYSMD4-210ENST00000545021 TUBB2AQ13885 445 aa22.02■■□□□ 1.12
LYSMD4-210ENST00000545021 HSP90AB4PQ58FF6 505 aa22.02■■□□□ 1.12
LYSMD4-210ENST00000545021 EVI5LQ96CN4 794 aa22.02■■□□□ 1.12
LYSMD4-210ENST00000545021 TUBB2BQ9BVA1 445 aa22.02■■□□□ 1.12
LYSMD4-210ENST00000545021 HIP1O00291 1037 aa22.02■■□□□ 1.12
LYSMD4-210ENST00000545021 WDHD1O75717 1129 aaPredicted RBP22.02■■□□□ 1.12
LYSMD4-210ENST00000545021 BAG1Q99933 345 aaPredicted RBP22.02■■□□□ 1.12
LYSMD4-210ENST00000545021 SUGCTQ9HAC7 445 aa22.02■■□□□ 1.12
LYSMD4-210ENST00000545021 HMG20BQ9P0W2 317 aa22.02■■□□□ 1.12
LYSMD4-210ENST00000545021 PLSCR1O15162 318 aa22.01■■□□□ 1.11
LYSMD4-210ENST00000545021 ATP1A3P13637 1013 aa22.01■■□□□ 1.11
LYSMD4-210ENST00000545021 AARSP49588 968 aaKnown RBP eCLIP22.01■■□□□ 1.11
LYSMD4-210ENST00000545021 LIG3P49916 1009 aa22.01■■□□□ 1.11
LYSMD4-210ENST00000545021 ADALQ6DHV7 355 aa22.01■■□□□ 1.11
LYSMD4-210ENST00000545021 SMARCC2Q8TAQ2 1214 aa22.01■■□□□ 1.11
LYSMD4-210ENST00000545021 VIPAS39Q9H9C1 493 aa22.01■■□□□ 1.11
LYSMD4-210ENST00000545021 MYO1BO43795 1136 aa22.01■■□□□ 1.11
LYSMD4-210ENST00000545021 PHACTR2O75167 634 aa22.01■■□□□ 1.11
LYSMD4-210ENST00000545021 POTEDQ86YR6 584 aa22.01■■□□□ 1.11
LYSMD4-210ENST00000545021 LLPHQ9BRT6 129 aaKnown RBP22.01■■□□□ 1.11
LYSMD4-210ENST00000545021 CDC23Q9UJX2 597 aa22.01■■□□□ 1.11
LYSMD4-210ENST00000545021 RNF40O75150 1001 aa22■■□□□ 1.11
LYSMD4-210ENST00000545021 DPF2Q92785 391 aa22■■□□□ 1.11
LYSMD4-210ENST00000545021 ZSWIM4Q9H7M6 989 aa22■■□□□ 1.11
LYSMD4-210ENST00000545021 SHOX2O60902 331 aaPredicted RBP22■■□□□ 1.11
LYSMD4-210ENST00000545021 CFAP100Q494V2 611 aa22■■□□□ 1.11
LYSMD4-210ENST00000545021 HSP90AB2PQ58FF8 381 aa22■■□□□ 1.11
LYSMD4-210ENST00000545021 WWC2Q6AWC2 1192 aa22■■□□□ 1.11
LYSMD4-210ENST00000545021 CTCFLQ8NI51 663 aaPredicted RBP22■■□□□ 1.11
LYSMD4-210ENST00000545021 TSPYL4Q9UJ04 414 aa22■■□□□ 1.11
LYSMD4-210ENST00000545021 DOT1LQ8TEK3 1739 aa22■■□□□ 1.11
LYSMD4-210ENST00000545021 BTAF1O14981 1849 aa22■■□□□ 1.11
LYSMD4-210ENST00000545021 TRIM37O94972 964 aa21.99■■□□□ 1.11
LYSMD4-210ENST00000545021 SERPINC1P01008 464 aa21.99■■□□□ 1.11
LYSMD4-210ENST00000545021 SLC3A2P08195 630 aaKnown RBP21.99■■□□□ 1.11
LYSMD4-210ENST00000545021 HSP90AB3PQ58FF7 597 aa21.99■■□□□ 1.11
LYSMD4-210ENST00000545021 TTLL5Q6EMB2 1281 aa21.99■■□□□ 1.11
LYSMD4-210ENST00000545021 ECHDC1Q9NTX5 307 aa21.99■■□□□ 1.11
LYSMD4-210ENST00000545021 PCDHA7Q9UN72 937 aa21.99■■□□□ 1.11
LYSMD4-210ENST00000545021 PRPF6O94906 941 aaKnown RBP21.99■■□□□ 1.11
LYSMD4-210ENST00000545021 NDUFA8P51970 172 aa21.99■■□□□ 1.11
LYSMD4-210ENST00000545021 TOGARAM2Q6ZUX3 1019 aa21.99■■□□□ 1.11
LYSMD4-210ENST00000545021 PPP1R12AO14974 1030 aaPredicted RBP21.98■■□□□ 1.11
LYSMD4-210ENST00000545021 VSNL1P62760 191 aa21.98■■□□□ 1.11
LYSMD4-210ENST00000545021 SETQ01105 290 aaPredicted RBP21.98■■□□□ 1.11
LYSMD4-210ENST00000545021 GOLGA8FQ08AF8 430 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms