RNA–Protein interactions for RNA: ENST00000543155.5

COPS7A-215, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-215ENST00000543155 IFNL3Q8IZI9 196 aa21.65■■□□□ 1.06
COPS7A-215ENST00000543155 NAPBQ9H115 298 aa21.65■■□□□ 1.06
COPS7A-215ENST00000543155 EPB41L4AQ9HCS5 686 aaPredicted RBP21.65■■□□□ 1.06
COPS7A-215ENST00000543155 GJB4Q9NTQ9 266 aa21.65■■□□□ 1.06
COPS7A-215ENST00000543155 BECN2A8MW95 431 aa21.65■■□□□ 1.06
COPS7A-215ENST00000543155 ZBTB43O43298 467 aa21.65■■□□□ 1.06
COPS7A-215ENST00000543155 CAMTA2O94983 1202 aa21.65■■□□□ 1.06
COPS7A-215ENST00000543155 ATP6V1AP38606 617 aa21.65■■□□□ 1.06
COPS7A-215ENST00000543155 SGMS1Q86VZ5 419 aa21.65■■□□□ 1.06
COPS7A-215ENST00000543155 IGDCC4Q8TDY8 1250 aa21.65■■□□□ 1.06
COPS7A-215ENST00000543155 MRFAP1L1Q96HT8 127 aa21.65■■□□□ 1.06
COPS7A-215ENST00000543155 SDF4Q9BRK5 362 aa21.65■■□□□ 1.06
COPS7A-215ENST00000543155 NAT10Q9H0A0 1025 aaKnown RBP21.65■■□□□ 1.06
COPS7A-215ENST00000543155 DDB1Q16531 1140 aa21.64■■□□□ 1.06
COPS7A-215ENST00000543155 DHX40Q8IX18 779 aaKnown RBP21.64■■□□□ 1.06
COPS7A-215ENST00000543155 CNNM2Q9H8M5 875 aa21.64■■□□□ 1.06
COPS7A-215ENST00000543155 LY9Q9HBG7 655 aa21.64■■□□□ 1.06
COPS7A-215ENST00000543155 SEC31BQ9NQW1 1179 aa21.64■■□□□ 1.06
COPS7A-215ENST00000543155 THRAP3Q9Y2W1 955 aaKnown RBP21.64■■□□□ 1.06
COPS7A-215ENST00000543155 FAM177BA6PVY3 158 aa21.64■■□□□ 1.05
COPS7A-215ENST00000543155 IGHMBP2P38935 993 aaKnown RBP21.64■■□□□ 1.05
COPS7A-215ENST00000543155 TMEM67Q5HYA8 995 aa21.64■■□□□ 1.05
COPS7A-215ENST00000543155 NFXL1Q6ZNB6 911 aa21.64■■□□□ 1.05
COPS7A-215ENST00000543155 PDCL3Q9H2J4 239 aa21.64■■□□□ 1.05
COPS7A-215ENST00000543155 NRBP1Q9UHY1 535 aa21.64■■□□□ 1.05
COPS7A-215ENST00000543155 SPATA31A1Q5TZJ5 1347 aa21.63■■□□□ 1.05
COPS7A-215ENST00000543155 CDC27P30260 824 aa21.63■■□□□ 1.05
COPS7A-215ENST00000543155 MICU3Q86XE3 530 aa21.63■■□□□ 1.05
COPS7A-215ENST00000543155 ARMT1Q9H993 441 aa21.63■■□□□ 1.05
COPS7A-215ENST00000543155 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.62■■□□□ 1.05
COPS7A-215ENST00000543155 GOLGA8AA7E2F4 631 aa21.62■■□□□ 1.05
COPS7A-215ENST00000543155 GNAT2P19087 354 aa21.62■■□□□ 1.05
COPS7A-215ENST00000543155 LIFRP42702 1097 aa21.62■■□□□ 1.05
COPS7A-215ENST00000543155 KRT40Q6A162 431 aa21.62■■□□□ 1.05
COPS7A-215ENST00000543155 SENP2Q9HC62 589 aa21.62■■□□□ 1.05
COPS7A-215ENST00000543155 LOC102724428A0A0B4J2F2 783 aa21.62■■□□□ 1.05
COPS7A-215ENST00000543155 NTSR2O95665 410 aa21.62■■□□□ 1.05
COPS7A-215ENST00000543155 RXRAP19793 462 aa21.62■■□□□ 1.05
COPS7A-215ENST00000543155 SIK1P57059 783 aa21.62■■□□□ 1.05
COPS7A-215ENST00000543155 RBM10P98175 930 aaKnown RBP21.62■■□□□ 1.05
COPS7A-215ENST00000543155 KRT23Q9C075 422 aa21.62■■□□□ 1.05
COPS7A-215ENST00000543155 MYH14Q7Z406 1995 aaKnown RBP21.62■■□□□ 1.05
COPS7A-215ENST00000543155 PNPLA7Q6ZV29 1317 aa21.62■■□□□ 1.05
COPS7A-215ENST00000543155 STK36Q9NRP7 1315 aa21.62■■□□□ 1.05
COPS7A-215ENST00000543155 A0A0G2JS52 829 aa21.61■■□□□ 1.05
COPS7A-215ENST00000543155 CTDSPL2Q05D32 466 aa21.61■■□□□ 1.05
COPS7A-215ENST00000543155 SLC39A14Q15043 492 aa21.61■■□□□ 1.05
COPS7A-215ENST00000543155 VPS37DQ86XT2 251 aa21.61■■□□□ 1.05
COPS7A-215ENST00000543155 AIFM3Q96NN9 605 aa21.61■■□□□ 1.05
COPS7A-215ENST00000543155 MAP7D2Q96T17 732 aa21.61■■□□□ 1.05
COPS7A-215ENST00000543155 A0A1B0GUL6 1792 aa21.61■■□□□ 1.05
COPS7A-215ENST00000543155 NID2Q14112 1375 aa21.61■■□□□ 1.05
COPS7A-215ENST00000543155 COL5A3P25940 1745 aaPredicted RBP21.61■■□□□ 1.05
COPS7A-215ENST00000543155 GSG1L2A8MUP6 293 aa21.61■■□□□ 1.05
COPS7A-215ENST00000543155 SNAP23O00161 211 aa21.61■■□□□ 1.05
COPS7A-215ENST00000543155 CMA1P23946 247 aa21.61■■□□□ 1.05
COPS7A-215ENST00000543155 GTF2F1P35269 517 aaKnown RBP eCLIP21.61■■□□□ 1.05
COPS7A-215ENST00000543155 IARSP41252 1262 aaKnown RBP21.61■■□□□ 1.05
COPS7A-215ENST00000543155 NTRK3Q16288 839 aa21.61■■□□□ 1.05
COPS7A-215ENST00000543155 AXDND1Q5T1B0 1012 aaPredicted RBP21.61■■□□□ 1.05
COPS7A-215ENST00000543155 AKNAD1Q5T1N1 836 aa21.61■■□□□ 1.05
COPS7A-215ENST00000543155 PHKBQ93100 1093 aa21.61■■□□□ 1.05
COPS7A-215ENST00000543155 NACAP1Q9BZK3 213 aa21.61■■□□□ 1.05
COPS7A-215ENST00000543155 FAM13BQ9NYF5 915 aa21.61■■□□□ 1.05
COPS7A-215ENST00000543155 KIAA1468Q9P260 1216 aa21.61■■□□□ 1.05
COPS7A-215ENST00000543155 LRMPQ12912 555 aa21.6■■□□□ 1.05
COPS7A-215ENST00000543155 TRIM29Q14134 588 aa21.6■■□□□ 1.05
COPS7A-215ENST00000543155 ZRSR1Q15695 479 aaKnown RBP21.6■■□□□ 1.05
COPS7A-215ENST00000543155 ACSBG1Q96GR2 724 aa21.6■■□□□ 1.05
COPS7A-215ENST00000543155 NIP7Q9Y221 180 aaKnown RBP eCLIP21.6■■□□□ 1.05
COPS7A-215ENST00000543155 SLC12A7Q9Y666 1083 aa21.6■■□□□ 1.05
COPS7A-215ENST00000543155 BCL9LQ86UU0 1499 aa21.6■■□□□ 1.05
COPS7A-215ENST00000543155 CCDC69A6NI79 296 aa21.59■■□□□ 1.05
COPS7A-215ENST00000543155 IFIT3O14879 490 aaKnown RBP21.59■■□□□ 1.05
COPS7A-215ENST00000543155 CHAF1AQ13111 956 aaPredicted RBP21.59■■□□□ 1.05
COPS7A-215ENST00000543155 ITPK1Q13572 414 aa21.59■■□□□ 1.05
COPS7A-215ENST00000543155 GNL2Q13823 731 aaKnown RBP21.59■■□□□ 1.05
COPS7A-215ENST00000543155 AOPEPQ8N6M6 819 aa21.59■■□□□ 1.05
COPS7A-215ENST00000543155 BPIFA3Q9BQP9 254 aa21.59■■□□□ 1.05
COPS7A-215ENST00000543155 ZSWIM5Q9P217 1185 aa21.59■■□□□ 1.05
COPS7A-215ENST00000543155 A0A087WWV3 80 aa21.59■■□□□ 1.05
COPS7A-215ENST00000543155 RANBP6O60518 1105 aaKnown RBP21.59■■□□□ 1.05
COPS7A-215ENST00000543155 ZNF202O95125 648 aa21.59■■□□□ 1.05
COPS7A-215ENST00000543155 BCAMP50895 628 aa21.59■■□□□ 1.05
COPS7A-215ENST00000543155 CCDC144BQ3MJ40 725 aa21.59■■□□□ 1.05
COPS7A-215ENST00000543155 MFSD6Q6ZSS7 791 aa21.59■■□□□ 1.05
COPS7A-215ENST00000543155 CCDC144CPQ8IYA2 1237 aa21.59■■□□□ 1.05
COPS7A-215ENST00000543155 JMYQ8N9B5 988 aa21.59■■□□□ 1.05
COPS7A-215ENST00000543155 STAG1Q8WVM7 1258 aa21.59■■□□□ 1.05
COPS7A-215ENST00000543155 ERCC4Q92889 916 aaPredicted RBP21.59■■□□□ 1.05
COPS7A-215ENST00000543155 FAM217BQ9NTX9 383 aaPredicted RBP21.59■■□□□ 1.05
COPS7A-215ENST00000543155 PPP6R2O75170 966 aa21.58■■□□□ 1.05
COPS7A-215ENST00000543155 PFKFB1P16118 471 aa21.58■■□□□ 1.05
COPS7A-215ENST00000543155 TDO2P48775 406 aa21.58■■□□□ 1.05
COPS7A-215ENST00000543155 LCORLQ8N3X6 602 aa21.58■■□□□ 1.05
COPS7A-215ENST00000543155 INCENPQ9NQS7 918 aa21.58■■□□□ 1.05
COPS7A-215ENST00000543155 SLC4A4Q9Y6R1 1079 aa21.58■■□□□ 1.05
COPS7A-215ENST00000543155 MROH7-TTC4A0A0A0MT08 1334 aa21.58■■□□□ 1.05
COPS7A-215ENST00000543155 NEMFO60524 1076 aa21.58■■□□□ 1.04
COPS7A-215ENST00000543155 SLC3A2P08195 630 aaKnown RBP21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms