RNA–Protein interactions for RNA: ENST00000526991.2

CHMP1B-201, Transcript of charged multivesicular body protein 1B, humanhuman

APPRIS P1 BASIC

Gene CHMP1B, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-201ENST00000526991 CHAF1AQ13111 956 aaPredicted RBP13.92□□□□□ -0.18
CHMP1B-201ENST00000526991 TDRD7Q8NHU6 1098 aaKnown RBP13.92□□□□□ -0.18
CHMP1B-201ENST00000526991 HPS5Q9UPZ3 1129 aa13.92□□□□□ -0.18
CHMP1B-201ENST00000526991 TAF1P21675 1872 aa13.92□□□□□ -0.18
CHMP1B-201ENST00000526991 SLIT2O94813 1529 aa13.92□□□□□ -0.18
CHMP1B-201ENST00000526991 ZNF532Q9HCE3 1301 aa13.92□□□□□ -0.18
CHMP1B-201ENST00000526991 PHLPP1O60346 1717 aa13.92□□□□□ -0.18
CHMP1B-201ENST00000526991 PRKAB2O43741 272 aa13.92□□□□□ -0.18
CHMP1B-201ENST00000526991 RASGRF1Q13972 1273 aa13.92□□□□□ -0.18
CHMP1B-201ENST00000526991 IQCB1Q15051 598 aa13.92□□□□□ -0.18
CHMP1B-201ENST00000526991 TPD52L1Q16890 204 aaPredicted RBP13.92□□□□□ -0.18
CHMP1B-201ENST00000526991 RRP12Q5JTH9 1297 aaKnown RBP13.92□□□□□ -0.18
CHMP1B-201ENST00000526991 PLA2G4DQ86XP0 818 aa13.92□□□□□ -0.18
CHMP1B-201ENST00000526991 MAGEB6Q8N7X4 407 aa13.92□□□□□ -0.18
CHMP1B-201ENST00000526991 APPBP2Q92624 585 aa13.92□□□□□ -0.18
CHMP1B-201ENST00000526991 ZNF274Q96GC6 653 aaPredicted RBP13.92□□□□□ -0.18
CHMP1B-201ENST00000526991 FAM160A1Q05DH4 1040 aa13.92□□□□□ -0.18
CHMP1B-201ENST00000526991 STX1AQ16623 288 aa13.92□□□□□ -0.18
CHMP1B-201ENST00000526991 TBC1D9BQ66K14 1250 aa13.92□□□□□ -0.18
CHMP1B-201ENST00000526991 RBM43Q6ZSC3 357 aaKnown RBP13.92□□□□□ -0.18
CHMP1B-201ENST00000526991 TBC1D10CQ8IV04 446 aa13.92□□□□□ -0.18
CHMP1B-201ENST00000526991 BCL2L12Q9HB09 334 aa13.92□□□□□ -0.18
CHMP1B-201ENST00000526991 CTNNA3Q9UI47 895 aa13.92□□□□□ -0.18
CHMP1B-201ENST00000526991 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.91□□□□□ -0.18
CHMP1B-201ENST00000526991 USP27XA6NNY8 438 aa13.91□□□□□ -0.18
CHMP1B-201ENST00000526991 KLRK1P26718 216 aa13.91□□□□□ -0.18
CHMP1B-201ENST00000526991 NFXL1Q6ZNB6 911 aa13.91□□□□□ -0.18
CHMP1B-201ENST00000526991 CYB5R4Q7L1T6 521 aa13.91□□□□□ -0.18
CHMP1B-201ENST00000526991 NCOA7Q8NI08 942 aa13.91□□□□□ -0.18
CHMP1B-201ENST00000526991 ZKSCAN3Q9BRR0 538 aa13.91□□□□□ -0.18
CHMP1B-201ENST00000526991 GNL2Q13823 731 aaKnown RBP13.91□□□□□ -0.18
CHMP1B-201ENST00000526991 ZRSR1Q15695 479 aaKnown RBP13.91□□□□□ -0.18
CHMP1B-201ENST00000526991 DPCR1Q3MIW9 517 aa13.91□□□□□ -0.18
CHMP1B-201ENST00000526991 SYNE3Q6ZMZ3 975 aa13.91□□□□□ -0.18
CHMP1B-201ENST00000526991 CMTR1Q8N1G2 835 aaKnown RBP13.91□□□□□ -0.18
CHMP1B-201ENST00000526991 ARMT1Q9H993 441 aa13.91□□□□□ -0.18
CHMP1B-201ENST00000526991 COL14A1Q05707 1796 aaKnown RBP13.91□□□□□ -0.18
CHMP1B-201ENST00000526991 SALL1Q9NSC2 1324 aa13.9□□□□□ -0.18
CHMP1B-201ENST00000526991 SPDYE4A6NLX3 237 aa13.9□□□□□ -0.18
CHMP1B-201ENST00000526991 TRDNQ13061 729 aa13.9□□□□□ -0.18
CHMP1B-201ENST00000526991 MB21D2Q8IYB1 491 aaPredicted RBP13.9□□□□□ -0.18
CHMP1B-201ENST00000526991 MRPS27Q92552 414 aaKnown RBP13.9□□□□□ -0.18
CHMP1B-201ENST00000526991 PRIMPOLQ96LW4 560 aa13.9□□□□□ -0.18
CHMP1B-201ENST00000526991 AGXT2Q9BYV1 514 aa13.9□□□□□ -0.18
CHMP1B-201ENST00000526991 RFX7Q2KHR2 1363 aa13.9□□□□□ -0.18
CHMP1B-201ENST00000526991 TNNT1P13805 278 aa13.9□□□□□ -0.18
CHMP1B-201ENST00000526991 CTDSPL2Q05D32 466 aa13.9□□□□□ -0.18
CHMP1B-201ENST00000526991 CHRNDQ07001 517 aa13.9□□□□□ -0.18
CHMP1B-201ENST00000526991 HSP90AA4PQ58FG1 418 aa13.9□□□□□ -0.18
CHMP1B-201ENST00000526991 SPECC1Q5M775 1068 aa13.9□□□□□ -0.18
CHMP1B-201ENST00000526991 VGLL2Q8N8G2 317 aa13.9□□□□□ -0.18
CHMP1B-201ENST00000526991 ENGASEQ8NFI3 743 aa13.9□□□□□ -0.18
CHMP1B-201ENST00000526991 CELF1Q92879 486 aaKnown RBP13.9□□□□□ -0.18
CHMP1B-201ENST00000526991 GPR101Q96P66 508 aaPredicted RBP13.9□□□□□ -0.18
CHMP1B-201ENST00000526991 NBPF3Q9H094 633 aa13.9□□□□□ -0.18
CHMP1B-201ENST00000526991 TFCP2L1Q9NZI6 479 aa13.9□□□□□ -0.18
CHMP1B-201ENST00000526991 NUP98P52948 1817 aa13.9□□□□□ -0.18
CHMP1B-201ENST00000526991 MYO5AQ9Y4I1 1855 aaKnown RBP13.89□□□□□ -0.19
CHMP1B-201ENST00000526991 ATP2B1P20020 1258 aa13.89□□□□□ -0.19
CHMP1B-201ENST00000526991 IGHMBP2P38935 993 aaKnown RBP13.89□□□□□ -0.19
CHMP1B-201ENST00000526991 DHX40Q8IX18 779 aaKnown RBP13.89□□□□□ -0.19
CHMP1B-201ENST00000526991 SMC2O95347 1197 aa13.89□□□□□ -0.19
CHMP1B-201ENST00000526991 NTSR2O95665 410 aa13.89□□□□□ -0.19
CHMP1B-201ENST00000526991 CBX1P83916 185 aa13.89□□□□□ -0.19
CHMP1B-201ENST00000526991 LINC00301Q8NCQ3 95 aa13.89□□□□□ -0.19
CHMP1B-201ENST00000526991 FBXO18Q8NFZ0 1043 aa13.89□□□□□ -0.19
CHMP1B-201ENST00000526991 PLA2G12BQ9BX93 195 aa13.89□□□□□ -0.19
CHMP1B-201ENST00000526991 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.89□□□□□ -0.19
CHMP1B-201ENST00000526991 V9GYY5 206 aaPredicted RBP13.89□□□□□ -0.19
CHMP1B-201ENST00000526991 PAPPAQ13219 1627 aa13.89□□□□□ -0.19
CHMP1B-201ENST00000526991 SPTLC2O15270 562 aa13.89□□□□□ -0.19
CHMP1B-201ENST00000526991 MYCNP04198 464 aaPredicted RBP13.89□□□□□ -0.19
CHMP1B-201ENST00000526991 CCNL1Q9UK58 526 aaPredicted RBP13.89□□□□□ -0.19
CHMP1B-201ENST00000526991 ERVV-1B6SEH8 477 aa13.88□□□□□ -0.19
CHMP1B-201ENST00000526991 MBD4O95243 580 aa13.88□□□□□ -0.19
CHMP1B-201ENST00000526991 TPM3P06753 285 aa13.88□□□□□ -0.19
CHMP1B-201ENST00000526991 PDE6AP16499 860 aa13.88□□□□□ -0.19
CHMP1B-201ENST00000526991 PUM3Q15397 648 aaKnown RBP13.88□□□□□ -0.19
CHMP1B-201ENST00000526991 MYSM1Q5VVJ2 828 aa13.88□□□□□ -0.19
CHMP1B-201ENST00000526991 AIDAQ96BJ3 306 aa13.88□□□□□ -0.19
CHMP1B-201ENST00000526991 CLIC6Q96NY7 704 aa13.88□□□□□ -0.19
CHMP1B-201ENST00000526991 ALG1Q9BT22 464 aa13.88□□□□□ -0.19
CHMP1B-201ENST00000526991 LRP2BPQ9P2M1 347 aa13.88□□□□□ -0.19
CHMP1B-201ENST00000526991 CDC27P30260 824 aa13.88□□□□□ -0.19
CHMP1B-201ENST00000526991 METAP2P50579 478 aaKnown RBP eCLIP13.88□□□□□ -0.19
CHMP1B-201ENST00000526991 CCDC152Q4G0S7 254 aa13.88□□□□□ -0.19
CHMP1B-201ENST00000526991 FMR1NBQ8N0W7 255 aaPredicted RBP13.88□□□□□ -0.19
CHMP1B-201ENST00000526991 SPATA5Q8NB90 893 aa13.88□□□□□ -0.19
CHMP1B-201ENST00000526991 ANO10Q9NW15 660 aa13.88□□□□□ -0.19
CHMP1B-201ENST00000526991 CDHR2Q9BYE9 1310 aa13.88□□□□□ -0.19
CHMP1B-201ENST00000526991 SKILP12757 684 aa13.87□□□□□ -0.19
CHMP1B-201ENST00000526991 IRX3P78415 501 aaPredicted RBP13.87□□□□□ -0.19
CHMP1B-201ENST00000526991 LRRFIP1Q32MZ4 808 aaKnown RBP13.87□□□□□ -0.19
CHMP1B-201ENST00000526991 VPS37DQ86XT2 251 aa13.87□□□□□ -0.19
CHMP1B-201ENST00000526991 CEP57L1Q8IYX8 460 aa13.87□□□□□ -0.19
CHMP1B-201ENST00000526991 SDR42E1Q8WUS8 393 aa13.87□□□□□ -0.19
CHMP1B-201ENST00000526991 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.87□□□□□ -0.19
CHMP1B-201ENST00000526991 COL4A1P02462 1669 aa13.87□□□□□ -0.19
CHMP1B-201ENST00000526991 CCDC69A6NI79 296 aa13.87□□□□□ -0.19
CHMP1B-201ENST00000526991 WDHD1O75717 1129 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms