RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 MCM5P33992 734 aa8.77□□□□□ -1.01
HDAC3-216ENST00000523088 NFE2L2Q16236 605 aa8.77□□□□□ -1.01
HDAC3-216ENST00000523088 PTPROQ16827 1216 aa8.77□□□□□ -1.01
HDAC3-216ENST00000523088 AP1ARQ63HQ0 302 aa8.77□□□□□ -1.01
HDAC3-216ENST00000523088 ARHGAP27Q6ZUM4 889 aa8.77□□□□□ -1.01
HDAC3-216ENST00000523088 MCM10Q7L590 875 aa8.77□□□□□ -1.01
HDAC3-216ENST00000523088 NCAPG2Q86XI2 1143 aa8.77□□□□□ -1.01
HDAC3-216ENST00000523088 HS6ST3Q8IZP7 471 aa8.77□□□□□ -1.01
HDAC3-216ENST00000523088 MYO1HQ8N1T3 1032 aa8.77□□□□□ -1.01
HDAC3-216ENST00000523088 KCNB2Q92953 911 aa8.77□□□□□ -1.01
HDAC3-216ENST00000523088 GBP4Q96PP9 640 aa8.77□□□□□ -1.01
HDAC3-216ENST00000523088 CEP89Q96ST8 783 aa8.77□□□□□ -1.01
HDAC3-216ENST00000523088 BRIP1Q9BX63 1249 aa8.77□□□□□ -1.01
HDAC3-216ENST00000523088 OGFRQ9NZT2 677 aa8.77□□□□□ -1.01
HDAC3-216ENST00000523088 GABBR1Q9UBS5 961 aa8.77□□□□□ -1.01
HDAC3-216ENST00000523088 BLOC1S6Q9UL45 172 aa8.77□□□□□ -1.01
HDAC3-216ENST00000523088 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.77□□□□□ -1.01
HDAC3-216ENST00000523088 TMA7Q9Y2S6 64 aaKnown RBP8.77□□□□□ -1.01
HDAC3-216ENST00000523088 ZNF330Q9Y3S2 320 aaPredicted RBP8.77□□□□□ -1.01
HDAC3-216ENST00000523088 IKBKGQ9Y6K9 419 aa8.77□□□□□ -1.01
HDAC3-216ENST00000523088 KDM2BQ8NHM5 1336 aa8.77□□□□□ -1.01
HDAC3-216ENST00000523088 CCDC88AQ3V6T2 1871 aa8.77□□□□□ -1.01
HDAC3-216ENST00000523088 NUP98P52948 1817 aa8.76□□□□□ -1.01
HDAC3-216ENST00000523088 SENP3-EIF4A1A0A087X0R7 540 aa8.76□□□□□ -1.01
HDAC3-216ENST00000523088 TRIM64CA6NLI5 447 aa8.76□□□□□ -1.01
HDAC3-216ENST00000523088 KCNA3P22001 575 aa8.76□□□□□ -1.01
HDAC3-216ENST00000523088 GTF2F1P35269 517 aaKnown RBP eCLIP8.76□□□□□ -1.01
HDAC3-216ENST00000523088 CLK1P49759 484 aaKnown RBP8.76□□□□□ -1.01
HDAC3-216ENST00000523088 INHBEP58166 350 aa8.76□□□□□ -1.01
HDAC3-216ENST00000523088 TTLL6Q8N841 843 aa8.76□□□□□ -1.01
HDAC3-216ENST00000523088 CNBD1Q8NA66 436 aa8.76□□□□□ -1.01
HDAC3-216ENST00000523088 PLEKHF1Q96S99 279 aa8.76□□□□□ -1.01
HDAC3-216ENST00000523088 SH3GL3Q99963 347 aa8.76□□□□□ -1.01
HDAC3-216ENST00000523088 UPF2Q9HAU5 1272 aaKnown RBP8.76□□□□□ -1.01
HDAC3-216ENST00000523088 BCL2L12Q9HB09 334 aa8.76□□□□□ -1.01
HDAC3-216ENST00000523088 IRAK4Q9NWZ3 460 aa8.76□□□□□ -1.01
HDAC3-216ENST00000523088 RABL2BQ9UNT1 228 aa8.76□□□□□ -1.01
HDAC3-216ENST00000523088 IQSEC3Q9UPP2 1182 aaPredicted RBP8.76□□□□□ -1.01
HDAC3-216ENST00000523088 TIAM2Q8IVF5 1701 aa8.76□□□□□ -1.01
HDAC3-216ENST00000523088 FER1L6Q2WGJ9 1857 aa8.76□□□□□ -1.01
HDAC3-216ENST00000523088 CACNA1SQ13698 1873 aa8.75□□□□□ -1.01
HDAC3-216ENST00000523088 COL11A2P13942 1736 aaPredicted RBP8.75□□□□□ -1.01
HDAC3-216ENST00000523088 TMEM110-MUSTN1A8MSY1 372 aa8.75□□□□□ -1.01
HDAC3-216ENST00000523088 NAT2P11245 290 aa8.75□□□□□ -1.01
HDAC3-216ENST00000523088 MS4A1P11836 297 aa8.75□□□□□ -1.01
HDAC3-216ENST00000523088 HARSP12081 509 aaKnown RBP8.75□□□□□ -1.01
HDAC3-216ENST00000523088 COL6A1P12109 1028 aa8.75□□□□□ -1.01
HDAC3-216ENST00000523088 CD53P19397 219 aa8.75□□□□□ -1.01
HDAC3-216ENST00000523088 ATP2B1P20020 1258 aa8.75□□□□□ -1.01
HDAC3-216ENST00000523088 HOXD10P28358 340 aa8.75□□□□□ -1.01
HDAC3-216ENST00000523088 ICA1Q05084 483 aa8.75□□□□□ -1.01
HDAC3-216ENST00000523088 EIF2B5Q13144 721 aaKnown RBP8.75□□□□□ -1.01
HDAC3-216ENST00000523088 WDR43Q15061 677 aaKnown RBP eCLIP8.75□□□□□ -1.01
HDAC3-216ENST00000523088 PPP2R5AQ15172 486 aa8.75□□□□□ -1.01
HDAC3-216ENST00000523088 SLC5A9Q2M3M2 681 aa8.75□□□□□ -1.01
HDAC3-216ENST00000523088 CCDC178Q5BJE1 867 aa8.75□□□□□ -1.01
HDAC3-216ENST00000523088 MCTP2Q6DN12 878 aa8.75□□□□□ -1.01
HDAC3-216ENST00000523088 TTLL5Q6EMB2 1281 aa8.75□□□□□ -1.01
HDAC3-216ENST00000523088 SLF2Q8IX21 1173 aa8.75□□□□□ -1.01
HDAC3-216ENST00000523088 RPUSD2Q8IZ73 545 aaKnown RBP8.75□□□□□ -1.01
HDAC3-216ENST00000523088 MICALL1Q8N3F8 863 aa8.75□□□□□ -1.01
HDAC3-216ENST00000523088 PHC3Q8NDX5 983 aa8.75□□□□□ -1.01
HDAC3-216ENST00000523088 FRS2Q8WU20 508 aa8.75□□□□□ -1.01
HDAC3-216ENST00000523088 CNKSR1Q969H4 720 aa8.75□□□□□ -1.01
HDAC3-216ENST00000523088 MPP4Q96JB8 637 aa8.75□□□□□ -1.01
HDAC3-216ENST00000523088 TTC14Q96N46 770 aa8.75□□□□□ -1.01
HDAC3-216ENST00000523088 RPS6KC1Q96S38 1066 aa8.75□□□□□ -1.01
HDAC3-216ENST00000523088 EPAS1Q99814 870 aa8.75□□□□□ -1.01
HDAC3-216ENST00000523088 JRKLQ9Y4A0 524 aa8.75□□□□□ -1.01
HDAC3-216ENST00000523088 MORC2Q9Y6X9 1032 aaPredicted RBP8.75□□□□□ -1.01
HDAC3-216ENST00000523088 IBTKQ9P2D0 1353 aaPredicted RBP8.74□□□□□ -1.01
HDAC3-216ENST00000523088 HIP1RO75146 1068 aa8.74□□□□□ -1.01
HDAC3-216ENST00000523088 E2F6O75461 281 aa8.74□□□□□ -1.01
HDAC3-216ENST00000523088 CAMTA2O94983 1202 aa8.74□□□□□ -1.01
HDAC3-216ENST00000523088 A1BGP04217 495 aa8.74□□□□□ -1.01
HDAC3-216ENST00000523088 POU5F1BQ06416 359 aa8.74□□□□□ -1.01
HDAC3-216ENST00000523088 WASHC5Q12768 1159 aa8.74□□□□□ -1.01
HDAC3-216ENST00000523088 KRT72Q14CN4 511 aa8.74□□□□□ -1.01
HDAC3-216ENST00000523088 TBC1D9BQ66K14 1250 aa8.74□□□□□ -1.01
HDAC3-216ENST00000523088 STYK1Q6J9G0 422 aa8.74□□□□□ -1.01
HDAC3-216ENST00000523088 TPTE2Q6XPS3 522 aa8.74□□□□□ -1.01
HDAC3-216ENST00000523088 KIF6Q6ZMV9 814 aa8.74□□□□□ -1.01
HDAC3-216ENST00000523088 DPH6Q7L8W6 267 aa8.74□□□□□ -1.01
HDAC3-216ENST00000523088 C2CD5Q86YS7 1000 aa8.74□□□□□ -1.01
HDAC3-216ENST00000523088 NBPF15Q8N660 670 aa8.74□□□□□ -1.01
HDAC3-216ENST00000523088 DRAXINQ8NBI3 349 aaPredicted RBP8.74□□□□□ -1.01
HDAC3-216ENST00000523088 IWS1Q96ST2 819 aa8.74□□□□□ -1.01
HDAC3-216ENST00000523088 TRIM7Q9C029 511 aa8.74□□□□□ -1.01
HDAC3-216ENST00000523088 BRINP2Q9C0B6 783 aa8.74□□□□□ -1.01
HDAC3-216ENST00000523088 NYXQ9GZU5 481 aa8.74□□□□□ -1.01
HDAC3-216ENST00000523088 QPCTLQ9NXS2 382 aa8.74□□□□□ -1.01
HDAC3-216ENST00000523088 BARX2Q9UMQ3 279 aaPredicted RBP8.74□□□□□ -1.01
HDAC3-216ENST00000523088 USP16Q9Y5T5 823 aa8.74□□□□□ -1.01
HDAC3-216ENST00000523088 RIC1Q4ADV7 1423 aa8.73□□□□□ -1.01
HDAC3-216ENST00000523088 ERVV-1B6SEH8 477 aa8.73□□□□□ -1.01
HDAC3-216ENST00000523088 F8VZ95 297 aa8.73□□□□□ -1.01
HDAC3-216ENST00000523088 TOMM70O94826 608 aa8.73□□□□□ -1.01
HDAC3-216ENST00000523088 SLFN14P0C7P3 912 aa8.73□□□□□ -1.01
HDAC3-216ENST00000523088 XBP1P17861 261 aa8.73□□□□□ -1.01
HDAC3-216ENST00000523088 LMNB1P20700 586 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms