RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 ZNF384Q8TF68 577 aa30.35■■■□□ 2.45
COL13A1-214ENST00000522165 IGDCC4Q8TDY8 1250 aa30.35■■■□□ 2.45
COL13A1-214ENST00000522165 STAG1Q8WVM7 1258 aa30.35■■■□□ 2.45
COL13A1-214ENST00000522165 SERPINB2P05120 415 aa30.34■■■□□ 2.45
COL13A1-214ENST00000522165 MFSD6Q6ZSS7 791 aa30.34■■■□□ 2.45
COL13A1-214ENST00000522165 TXNRD3Q86VQ6 643 aa30.34■■■□□ 2.45
COL13A1-214ENST00000522165 KRT23Q9C075 422 aa30.34■■■□□ 2.45
COL13A1-214ENST00000522165 CCDC183Q5T5S1 534 aa30.34■■■□□ 2.45
COL13A1-214ENST00000522165 PROM2Q8N271 834 aa30.34■■■□□ 2.45
COL13A1-214ENST00000522165 PPFIA3O75145 1194 aa30.33■■■□□ 2.45
COL13A1-214ENST00000522165 NASPP49321 788 aaPredicted RBP30.33■■■□□ 2.45
COL13A1-214ENST00000522165 TXNRD1Q16881 649 aa30.33■■■□□ 2.45
COL13A1-214ENST00000522165 CRY2Q49AN0 593 aa30.33■■■□□ 2.45
COL13A1-214ENST00000522165 RBSNQ9H1K0 784 aa30.33■■■□□ 2.45
COL13A1-214ENST00000522165 ZSWIM5Q9P217 1185 aa30.33■■■□□ 2.45
COL13A1-214ENST00000522165 TFIP11Q9UBB9 837 aaKnown RBP30.33■■■□□ 2.45
COL13A1-214ENST00000522165 FOSBP53539 338 aa30.32■■■□□ 2.44
COL13A1-214ENST00000522165 ST5P78524 1137 aa30.32■■■□□ 2.44
COL13A1-214ENST00000522165 RAB11FIP4Q86YS3 637 aa30.32■■■□□ 2.44
COL13A1-214ENST00000522165 NSUN4Q96CB9 384 aaKnown RBP30.32■■■□□ 2.44
COL13A1-214ENST00000522165 ANKIB1Q9P2G1 1089 aa30.32■■■□□ 2.44
COL13A1-214ENST00000522165 LEMD3Q9Y2U8 911 aa30.32■■■□□ 2.44
COL13A1-214ENST00000522165 KDM4AO75164 1064 aa30.32■■■□□ 2.44
COL13A1-214ENST00000522165 TPRNQ4KMQ1 711 aa30.32■■■□□ 2.44
COL13A1-214ENST00000522165 SDR42E1Q8WUS8 393 aa30.32■■■□□ 2.44
COL13A1-214ENST00000522165 RPGRQ92834 1020 aaKnown RBP30.32■■■□□ 2.44
COL13A1-214ENST00000522165 LY9Q9HBG7 655 aa30.32■■■□□ 2.44
COL13A1-214ENST00000522165 SGMS1Q86VZ5 419 aa30.31■■■□□ 2.44
COL13A1-214ENST00000522165 SPATA32Q96LK8 384 aa30.31■■■□□ 2.44
COL13A1-214ENST00000522165 SENP2Q9HC62 589 aa30.31■■■□□ 2.44
COL13A1-214ENST00000522165 CPLX1O14810 134 aa30.31■■■□□ 2.44
COL13A1-214ENST00000522165 TMEM67Q5HYA8 995 aa30.31■■■□□ 2.44
COL13A1-214ENST00000522165 APOA5Q6Q788 366 aa30.31■■■□□ 2.44
COL13A1-214ENST00000522165 SLC51AQ86UW1 340 aa30.31■■■□□ 2.44
COL13A1-214ENST00000522165 LEO1Q8WVC0 666 aaPredicted RBP30.31■■■□□ 2.44
COL13A1-214ENST00000522165 LIFRP42702 1097 aa30.3■■■□□ 2.44
COL13A1-214ENST00000522165 DYNLL1P63167 89 aaKnown RBP30.3■■■□□ 2.44
COL13A1-214ENST00000522165 MECOMQ03112 1051 aa30.3■■■□□ 2.44
COL13A1-214ENST00000522165 PPARAQ07869 468 aa30.3■■■□□ 2.44
COL13A1-214ENST00000522165 CHAF1AQ13111 956 aaPredicted RBP30.3■■■□□ 2.44
COL13A1-214ENST00000522165 XDHP47989 1333 aa30.3■■■□□ 2.44
COL13A1-214ENST00000522165 HMGB2P26583 209 aaKnown RBP30.29■■■□□ 2.44
COL13A1-214ENST00000522165 ANAPC4Q9UJX5 808 aa30.29■■■□□ 2.44
COL13A1-214ENST00000522165 RBM6P78332 1123 aaKnown RBP30.29■■■□□ 2.44
COL13A1-214ENST00000522165 RNF41Q9H4P4 317 aaPredicted RBP30.29■■■□□ 2.44
COL13A1-214ENST00000522165 ORC3Q9UBD5 711 aaPredicted RBP30.29■■■□□ 2.44
COL13A1-214ENST00000522165 METAP2P50579 478 aaKnown RBP eCLIP30.28■■■□□ 2.44
COL13A1-214ENST00000522165 DDR1Q08345 913 aa30.28■■■□□ 2.44
COL13A1-214ENST00000522165 BRIP1Q9BX63 1249 aa30.28■■■□□ 2.44
COL13A1-214ENST00000522165 IFIT3O14879 490 aaKnown RBP30.27■■■□□ 2.44
COL13A1-214ENST00000522165 LETM1O95202 739 aaPredicted RBP30.27■■■□□ 2.44
COL13A1-214ENST00000522165 TMED8Q6PL24 325 aaPredicted RBP30.27■■■□□ 2.44
COL13A1-214ENST00000522165 CFAP45Q9UL16 551 aa30.27■■■□□ 2.44
COL13A1-214ENST00000522165 MYH15Q9Y2K3 1946 aa30.26■■■□□ 2.44
COL13A1-214ENST00000522165 PRDX5P30044 214 aa30.26■■■□□ 2.43
COL13A1-214ENST00000522165 ADD1P35611 737 aaKnown RBP30.26■■■□□ 2.43
COL13A1-214ENST00000522165 GUCY1B3Q02153 619 aa30.26■■■□□ 2.43
COL13A1-214ENST00000522165 NFXL1Q6ZNB6 911 aa30.26■■■□□ 2.43
COL13A1-214ENST00000522165 MAST2Q6P0Q8 1798 aa30.26■■■□□ 2.43
COL13A1-214ENST00000522165 POLRMTO00411 1230 aaKnown RBP30.26■■■□□ 2.43
COL13A1-214ENST00000522165 RRP12Q5JTH9 1297 aaKnown RBP30.26■■■□□ 2.43
COL13A1-214ENST00000522165 RBM17Q96I25 401 aaKnown RBP30.26■■■□□ 2.43
COL13A1-214ENST00000522165 TSPY26PQ9H489 355 aa30.26■■■□□ 2.43
COL13A1-214ENST00000522165 MINDY4BA8MYZ0 360 aa30.25■■■□□ 2.43
COL13A1-214ENST00000522165 ZBTB43O43298 467 aa30.25■■■□□ 2.43
COL13A1-214ENST00000522165 ZNF772Q68DY9 489 aaPredicted RBP30.25■■■□□ 2.43
COL13A1-214ENST00000522165 GIMAP6Q6P9H5 292 aa30.25■■■□□ 2.43
COL13A1-214ENST00000522165 C15orf52Q6ZUT6 534 aaKnown RBP30.25■■■□□ 2.43
COL13A1-214ENST00000522165 MTA3Q9BTC8 594 aa30.25■■■□□ 2.43
COL13A1-214ENST00000522165 TOMM22Q9NS69 142 aa30.25■■■□□ 2.43
COL13A1-214ENST00000522165 C8orf76Q96K31 380 aa30.24■■■□□ 2.43
COL13A1-214ENST00000522165 MICU3Q86XE3 530 aa30.24■■■□□ 2.43
COL13A1-214ENST00000522165 CDKL5O76039 1030 aa30.23■■■□□ 2.43
COL13A1-214ENST00000522165 RXRAP19793 462 aa30.23■■■□□ 2.43
COL13A1-214ENST00000522165 CDC27P30260 824 aa30.23■■■□□ 2.43
COL13A1-214ENST00000522165 GPSM2P81274 684 aa30.23■■■□□ 2.43
COL13A1-214ENST00000522165 SPTY2D1Q68D10 685 aaPredicted RBP30.23■■■□□ 2.43
COL13A1-214ENST00000522165 TDRD7Q8NHU6 1098 aaKnown RBP30.23■■■□□ 2.43
COL13A1-214ENST00000522165 SART3Q15020 963 aaKnown RBP30.23■■■□□ 2.43
COL13A1-214ENST00000522165 ATL3Q6DD88 541 aa30.23■■■□□ 2.43
COL13A1-214ENST00000522165 ILDR1Q86SU0 546 aaPredicted RBP30.23■■■□□ 2.43
COL13A1-214ENST00000522165 STK11IPQ8N1F8 1099 aa30.23■■■□□ 2.43
COL13A1-214ENST00000522165 FBXO18Q8NFZ0 1043 aa30.23■■■□□ 2.43
COL13A1-214ENST00000522165 SLC12A7Q9Y666 1083 aa30.23■■■□□ 2.43
COL13A1-214ENST00000522165 CCDC88AQ3V6T2 1871 aa30.22■■■□□ 2.43
COL13A1-214ENST00000522165 CCDC69A6NI79 296 aa30.22■■■□□ 2.43
COL13A1-214ENST00000522165 HOXA10P31260 410 aaPredicted RBP30.22■■■□□ 2.43
COL13A1-214ENST00000522165 KLHL34Q8N239 644 aa30.22■■■□□ 2.43
COL13A1-214ENST00000522165 RGS22Q8NE09 1264 aa30.22■■■□□ 2.43
COL13A1-214ENST00000522165 JAG2Q9Y219 1238 aa30.22■■■□□ 2.43
COL13A1-214ENST00000522165 GOLGA8AA7E2F4 631 aa30.21■■■□□ 2.43
COL13A1-214ENST00000522165 PLSCR1O15162 318 aa30.21■■■□□ 2.43
COL13A1-214ENST00000522165 CPLX2Q6PUV4 134 aaKnown RBP30.21■■■□□ 2.43
COL13A1-214ENST00000522165 ZNF804AQ7Z570 1209 aa30.21■■■□□ 2.43
COL13A1-214ENST00000522165 WDR66Q8TBY9 1149 aa30.21■■■□□ 2.43
COL13A1-214ENST00000522165 FAM217BQ9NTX9 383 aaPredicted RBP30.21■■■□□ 2.43
COL13A1-214ENST00000522165 GOLGA6L4A6NEF3 574 aa30.21■■■□□ 2.43
COL13A1-214ENST00000522165 OTUD7BQ6GQQ9 843 aa30.21■■■□□ 2.43
COL13A1-214ENST00000522165 AATFQ9NY61 560 aaKnown RBP eCLIP30.21■■■□□ 2.43
COL13A1-214ENST00000522165 BAZ2AQ9UIF9 1905 aaKnown RBP30.21■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms