RNA–Protein interactions for RNA: ENST00000517838.5

PVT1-206, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 518 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-206ENST00000517838 PCDHAC2Q9Y5I4 1007 aa9.28□□□□□ -0.92
PVT1-206ENST00000517838 RANBP2P49792 3224 aaKnown RBP9.27□□□□□ -0.93
PVT1-206ENST00000517838 PPP1R12BO60237 982 aaPredicted RBP9.27□□□□□ -0.93
PVT1-206ENST00000517838 USP2O75604 605 aaPredicted RBP9.27□□□□□ -0.93
PVT1-206ENST00000517838 IGKV5-2P06315 115 aa9.27□□□□□ -0.93
PVT1-206ENST00000517838 CT47B1P0C2W7 299 aaPredicted RBP9.27□□□□□ -0.93
PVT1-206ENST00000517838 MS4A1P11836 297 aa9.27□□□□□ -0.93
PVT1-206ENST00000517838 FOSBP53539 338 aa9.27□□□□□ -0.93
PVT1-206ENST00000517838 RARSP54136 660 aaKnown RBP9.27□□□□□ -0.93
PVT1-206ENST00000517838 PDE3AQ14432 1141 aa9.27□□□□□ -0.93
PVT1-206ENST00000517838 DLGAP5Q15398 846 aa9.27□□□□□ -0.93
PVT1-206ENST00000517838 SUPT20HL1Q3ZLR7 823 aa9.27□□□□□ -0.93
PVT1-206ENST00000517838 POTEEQ6S8J3 1075 aa9.27□□□□□ -0.93
PVT1-206ENST00000517838 CERS5Q8N5B7 392 aa9.27□□□□□ -0.93
PVT1-206ENST00000517838 MTMR14Q8NCE2 650 aa9.27□□□□□ -0.93
PVT1-206ENST00000517838 PRMT6Q96LA8 375 aaPredicted RBP9.27□□□□□ -0.93
PVT1-206ENST00000517838 SSC5DA1L4H1 1573 aa9.27□□□□□ -0.93
PVT1-206ENST00000517838 ZNF804BA4D1E1 1349 aa9.27□□□□□ -0.93
PVT1-206ENST00000517838 AOX1Q06278 1338 aa9.27□□□□□ -0.93
PVT1-206ENST00000517838 CLRN2A0PK11 232 aa9.26□□□□□ -0.93
PVT1-206ENST00000517838 ANP32AP39687 249 aaKnown RBP9.26□□□□□ -0.93
PVT1-206ENST00000517838 EXOSC9Q06265 439 aaKnown RBP9.26□□□□□ -0.93
PVT1-206ENST00000517838 OTUD7BQ6GQQ9 843 aa9.26□□□□□ -0.93
PVT1-206ENST00000517838 PANK1Q8TE04 598 aa9.26□□□□□ -0.93
PVT1-206ENST00000517838 MAP3K2Q9Y2U5 619 aa9.26□□□□□ -0.93
PVT1-206ENST00000517838 COG6Q9Y2V7 657 aa9.26□□□□□ -0.93
PVT1-206ENST00000517838 PPP2R3BQ9Y5P8 575 aa9.26□□□□□ -0.93
PVT1-206ENST00000517838 PTCH2Q9Y6C5 1203 aa9.26□□□□□ -0.93
PVT1-206ENST00000517838 PI4KAP2A4QPH2 592 aa9.25□□□□□ -0.93
PVT1-206ENST00000517838 SNAP23O00161 211 aa9.25□□□□□ -0.93
PVT1-206ENST00000517838 RASA3Q14644 834 aa9.25□□□□□ -0.93
PVT1-206ENST00000517838 CFAP100Q494V2 611 aa9.25□□□□□ -0.93
PVT1-206ENST00000517838 PPP4R3BQ5MIZ7 849 aa9.25□□□□□ -0.93
PVT1-206ENST00000517838 ZKSCAN2Q63HK3 967 aa9.25□□□□□ -0.93
PVT1-206ENST00000517838 PI4KAP1Q8N8J0 262 aa9.25□□□□□ -0.93
PVT1-206ENST00000517838 C8orf58Q8NAV2 365 aa9.25□□□□□ -0.93
PVT1-206ENST00000517838 KCNV2Q8TDN2 545 aa9.25□□□□□ -0.93
PVT1-206ENST00000517838 ANKRD2Q9GZV1 360 aa9.25□□□□□ -0.93
PVT1-206ENST00000517838 CD209Q9NNX6 404 aa9.25□□□□□ -0.93
PVT1-206ENST00000517838 IRS2Q9Y4H2 1338 aa9.25□□□□□ -0.93
PVT1-206ENST00000517838 COL1A1P02452 1464 aaPredicted RBP9.24□□□□□ -0.93
PVT1-206ENST00000517838 F8W031 263 aaPredicted RBP9.24□□□□□ -0.93
PVT1-206ENST00000517838 H7C1W4 665 aa9.24□□□□□ -0.93
PVT1-206ENST00000517838 DDX58O95786 925 aaKnown RBP9.24□□□□□ -0.93
PVT1-206ENST00000517838 MYCP01106 439 aaPredicted RBP9.24□□□□□ -0.93
PVT1-206ENST00000517838 ITGA6P23229 1130 aa9.24□□□□□ -0.93
PVT1-206ENST00000517838 IGHMBP2P38935 993 aaKnown RBP9.24□□□□□ -0.93
PVT1-206ENST00000517838 PBX2P40425 430 aa9.24□□□□□ -0.93
PVT1-206ENST00000517838 IREB2P48200 963 aaKnown RBP9.24□□□□□ -0.93
PVT1-206ENST00000517838 GNAI1P63096 354 aa9.24□□□□□ -0.93
PVT1-206ENST00000517838 CWF19L2Q2TBE0 894 aaKnown RBP9.24□□□□□ -0.93
PVT1-206ENST00000517838 SLC4A8Q2Y0W8 1093 aa9.24□□□□□ -0.93
PVT1-206ENST00000517838 SLC9C1Q4G0N8 1177 aa9.24□□□□□ -0.93
PVT1-206ENST00000517838 KSR2Q6VAB6 950 aa9.24□□□□□ -0.93
PVT1-206ENST00000517838 NBPF11Q86T75 865 aa9.24□□□□□ -0.93
PVT1-206ENST00000517838 ANKRD13AQ8IZ07 590 aa9.24□□□□□ -0.93
PVT1-206ENST00000517838 ZNF454Q8N9F8 522 aa9.24□□□□□ -0.93
PVT1-206ENST00000517838 BRI3BPQ8WY22 251 aa9.24□□□□□ -0.93
PVT1-206ENST00000517838 CLUAP1Q96AJ1 413 aa9.24□□□□□ -0.93
PVT1-206ENST00000517838 OPTNQ96CV9 577 aa9.24□□□□□ -0.93
PVT1-206ENST00000517838 ELP3Q9H9T3 547 aa9.24□□□□□ -0.93
PVT1-206ENST00000517838 KIF16BQ96L93 1317 aa9.24□□□□□ -0.93
PVT1-206ENST00000517838 SPDYE16A6NNV3 312 aaPredicted RBP9.23□□□□□ -0.93
PVT1-206ENST00000517838 MYO1BO43795 1136 aa9.23□□□□□ -0.93
PVT1-206ENST00000517838 CSF1RP07333 972 aa9.23□□□□□ -0.93
PVT1-206ENST00000517838 CHRNDQ07001 517 aa9.23□□□□□ -0.93
PVT1-206ENST00000517838 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.23□□□□□ -0.93
PVT1-206ENST00000517838 C15orf52Q6ZUT6 534 aaKnown RBP9.23□□□□□ -0.93
PVT1-206ENST00000517838 SH3TC2Q8TF17 1288 aa9.23□□□□□ -0.93
PVT1-206ENST00000517838 VEZTQ9HBM0 779 aa9.23□□□□□ -0.93
PVT1-206ENST00000517838 IFT57Q9NWB7 429 aa9.23□□□□□ -0.93
PVT1-206ENST00000517838 RBM27Q9P2N5 1060 aaKnown RBP9.23□□□□□ -0.93
PVT1-206ENST00000517838 A0A0C4DFX4 3053 aa9.23□□□□□ -0.93
PVT1-206ENST00000517838 KIAA0100Q14667 2235 aaKnown RBP9.22□□□□□ -0.93
PVT1-206ENST00000517838 CCL15-CCL14A0A0B4J2E2 113 aa9.22□□□□□ -0.93
PVT1-206ENST00000517838 NEURL1BA8MQ27 555 aa9.22□□□□□ -0.93
PVT1-206ENST00000517838 IPO8O15397 1037 aaKnown RBP9.22□□□□□ -0.93
PVT1-206ENST00000517838 TAF5LO75529 589 aa9.22□□□□□ -0.93
PVT1-206ENST00000517838 IL1R1P14778 569 aa9.22□□□□□ -0.93
PVT1-206ENST00000517838 KCNJ4P48050 445 aa9.22□□□□□ -0.93
PVT1-206ENST00000517838 ARHGEF6Q15052 776 aa9.22□□□□□ -0.93
PVT1-206ENST00000517838 CCL15Q16663 113 aa9.22□□□□□ -0.93
PVT1-206ENST00000517838 CCDC30Q5VVM6 783 aa9.22□□□□□ -0.93
PVT1-206ENST00000517838 UBE3BQ7Z3V4 1068 aa9.22□□□□□ -0.93
PVT1-206ENST00000517838 DZIP1LQ8IYY4 767 aaKnown RBP9.22□□□□□ -0.93
PVT1-206ENST00000517838 FAM43AQ8N2R8 423 aa9.22□□□□□ -0.93
PVT1-206ENST00000517838 TSPYL6Q8N831 410 aa9.22□□□□□ -0.93
PVT1-206ENST00000517838 HELBQ8NG08 1087 aaPredicted RBP9.22□□□□□ -0.93
PVT1-206ENST00000517838 TEPSINQ96N21 525 aa9.22□□□□□ -0.93
PVT1-206ENST00000517838 MPHOSPH8Q99549 860 aa9.22□□□□□ -0.93
PVT1-206ENST00000517838 PLA2G12BQ9BX93 195 aa9.22□□□□□ -0.93
PVT1-206ENST00000517838 ARHGAP39Q9C0H5 1083 aa9.22□□□□□ -0.93
PVT1-206ENST00000517838 ZFYVE28Q9HCC9 887 aa9.22□□□□□ -0.93
PVT1-206ENST00000517838 JAG2Q9Y219 1238 aa9.22□□□□□ -0.93
PVT1-206ENST00000517838 PCDHGA10Q9Y5H3 936 aa9.22□□□□□ -0.93
PVT1-206ENST00000517838 DLL1O00548 723 aa9.21□□□□□ -0.94
PVT1-206ENST00000517838 RGS3P49796 1198 aa9.21□□□□□ -0.94
PVT1-206ENST00000517838 RBM5P52756 815 aaKnown RBP eCLIP9.21□□□□□ -0.94
PVT1-206ENST00000517838 CASP7P55210 303 aa9.21□□□□□ -0.94
PVT1-206ENST00000517838 FKBP1AP62942 108 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms