RNA–Protein interactions for RNA: ENST00000515289.2

NPHP3-211, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-211ENST00000515289 KANK3Q6NY19 840 aa8.96□□□□□ -0.98
NPHP3-211ENST00000515289 NCAPG2Q86XI2 1143 aa8.96□□□□□ -0.98
NPHP3-211ENST00000515289 NIM1KQ8IY84 436 aa8.96□□□□□ -0.98
NPHP3-211ENST00000515289 SPOCK3Q9BQ16 436 aa8.96□□□□□ -0.98
NPHP3-211ENST00000515289 EHMT1Q9H9B1 1298 aa8.96□□□□□ -0.98
NPHP3-211ENST00000515289 POLMQ9NP87 494 aaPredicted RBP8.96□□□□□ -0.98
NPHP3-211ENST00000515289 SAMM50Q9Y512 469 aa8.96□□□□□ -0.98
NPHP3-211ENST00000515289 PCDHB5Q9Y5E4 795 aa8.96□□□□□ -0.98
NPHP3-211ENST00000515289 EIF4G3O43432 1585 aaKnown RBP8.95□□□□□ -0.98
NPHP3-211ENST00000515289 KHNYNO15037 678 aaKnown RBP8.95□□□□□ -0.98
NPHP3-211ENST00000515289 SOX18P35713 384 aa8.95□□□□□ -0.98
NPHP3-211ENST00000515289 CCINQ13939 588 aa8.95□□□□□ -0.98
NPHP3-211ENST00000515289 PPP2R5EQ16537 467 aa8.95□□□□□ -0.98
NPHP3-211ENST00000515289 FAM178BQ8IXR5 827 aa8.95□□□□□ -0.98
NPHP3-211ENST00000515289 JARID2Q92833 1246 aaPredicted RBP8.95□□□□□ -0.98
NPHP3-211ENST00000515289 FAM126AQ9BYI3 521 aaPredicted RBP8.95□□□□□ -0.98
NPHP3-211ENST00000515289 CRISPLD1Q9H336 500 aa8.95□□□□□ -0.98
NPHP3-211ENST00000515289 ZNF576Q9H609 170 aa8.95□□□□□ -0.98
NPHP3-211ENST00000515289 CAAP1Q9H8G2 361 aa8.95□□□□□ -0.98
NPHP3-211ENST00000515289 MCM8Q9UJA3 840 aa8.95□□□□□ -0.98
NPHP3-211ENST00000515289 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.95□□□□□ -0.98
NPHP3-211ENST00000515289 SAMD9Q5K651 1589 aa8.95□□□□□ -0.98
NPHP3-211ENST00000515289 B2RBV5 119 aa8.94□□□□□ -0.98
NPHP3-211ENST00000515289 KIF3BO15066 747 aa8.94□□□□□ -0.98
NPHP3-211ENST00000515289 BPNT1O95861 308 aa8.94□□□□□ -0.98
NPHP3-211ENST00000515289 HOXD8P13378 290 aaPredicted RBP8.94□□□□□ -0.98
NPHP3-211ENST00000515289 SOX5P35711 763 aa8.94□□□□□ -0.98
NPHP3-211ENST00000515289 EPHB1P54762 984 aa8.94□□□□□ -0.98
NPHP3-211ENST00000515289 FAAP100Q0VG06 881 aa8.94□□□□□ -0.98
NPHP3-211ENST00000515289 HYAL2Q12891 473 aa8.94□□□□□ -0.98
NPHP3-211ENST00000515289 BIRC2Q13490 618 aa8.94□□□□□ -0.98
NPHP3-211ENST00000515289 NFE2Q16621 373 aaPredicted RBP8.94□□□□□ -0.98
NPHP3-211ENST00000515289 SPRED3Q2MJR0 410 aa8.94□□□□□ -0.98
NPHP3-211ENST00000515289 ZC3H12BQ5HYM0 836 aaKnown RBP8.94□□□□□ -0.98
NPHP3-211ENST00000515289 C6orf15Q6UXA7 325 aaPredicted RBP8.94□□□□□ -0.98
NPHP3-211ENST00000515289 DDX42Q86XP3 938 aaKnown RBP eCLIP8.94□□□□□ -0.98
NPHP3-211ENST00000515289 RAVER1Q8IY67 606 aaKnown RBP8.94□□□□□ -0.98
NPHP3-211ENST00000515289 KRTAP3-3Q9BYR6 98 aa8.94□□□□□ -0.98
NPHP3-211ENST00000515289 KRTAP3-2Q9BYR7 98 aa8.94□□□□□ -0.98
NPHP3-211ENST00000515289 TMEM39AQ9NV64 488 aa8.94□□□□□ -0.98
NPHP3-211ENST00000515289 GPN3Q9UHW5 284 aaPredicted RBP8.94□□□□□ -0.98
NPHP3-211ENST00000515289 CYP8B1Q9UNU6 501 aa8.94□□□□□ -0.98
NPHP3-211ENST00000515289 KCNH4Q9UQ05 1017 aa8.94□□□□□ -0.98
NPHP3-211ENST00000515289 FHOD3Q2V2M9 1422 aa8.94□□□□□ -0.98
NPHP3-211ENST00000515289 SNAPC4Q5SXM2 1469 aa8.94□□□□□ -0.98
NPHP3-211ENST00000515289 MAP3K1Q13233 1512 aa8.94□□□□□ -0.98
NPHP3-211ENST00000515289 A0A096LPE4 126 aa8.93□□□□□ -0.98
NPHP3-211ENST00000515289 A0A1W2PPZ6 126 aa8.93□□□□□ -0.98
NPHP3-211ENST00000515289 RARAP10276 462 aa8.93□□□□□ -0.98
NPHP3-211ENST00000515289 MYCLP1P12525 358 aaPredicted RBP8.93□□□□□ -0.98
NPHP3-211ENST00000515289 TARSP26639 723 aaKnown RBP8.93□□□□□ -0.98
NPHP3-211ENST00000515289 CTSOP43234 321 aaPredicted RBP8.93□□□□□ -0.98
NPHP3-211ENST00000515289 NLRP8Q86W28 1048 aa8.93□□□□□ -0.98
NPHP3-211ENST00000515289 SNIP1Q8TAD8 396 aaKnown RBP8.93□□□□□ -0.98
NPHP3-211ENST00000515289 SLC26A8Q96RN1 970 aa8.93□□□□□ -0.98
NPHP3-211ENST00000515289 GSX2Q9BZM3 304 aa8.93□□□□□ -0.98
NPHP3-211ENST00000515289 ZCCHC2Q9C0B9 1178 aaKnown RBP8.93□□□□□ -0.98
NPHP3-211ENST00000515289 TIMMDC1Q9NPL8 285 aa8.93□□□□□ -0.98
NPHP3-211ENST00000515289 PCF11O94913 1555 aaKnown RBP8.92□□□□□ -0.98
NPHP3-211ENST00000515289 A0A087X0B3 334 aa8.92□□□□□ -0.98
NPHP3-211ENST00000515289 A0A1W2PQH9 124 aa8.92□□□□□ -0.98
NPHP3-211ENST00000515289 RFPL3O75679 317 aa8.92□□□□□ -0.98
NPHP3-211ENST00000515289 ALDH1L1O75891 902 aa8.92□□□□□ -0.98
NPHP3-211ENST00000515289 ATE1O95260 518 aa8.92□□□□□ -0.98
NPHP3-211ENST00000515289 ACPPP15309 386 aa8.92□□□□□ -0.98
NPHP3-211ENST00000515289 PPP2R3AQ06190 1150 aa8.92□□□□□ -0.98
NPHP3-211ENST00000515289 PERM1Q5SV97 790 aa8.92□□□□□ -0.98
NPHP3-211ENST00000515289 COL13A1Q5TAT6 717 aaPredicted RBP8.92□□□□□ -0.98
NPHP3-211ENST00000515289 MRM1Q6IN84 353 aaKnown RBP8.92□□□□□ -0.98
NPHP3-211ENST00000515289 EEPD1Q7L9B9 569 aa8.92□□□□□ -0.98
NPHP3-211ENST00000515289 PRICKLE2Q7Z3G6 844 aa8.92□□□□□ -0.98
NPHP3-211ENST00000515289 KRT25Q7Z3Z0 450 aa8.92□□□□□ -0.98
NPHP3-211ENST00000515289 CEP120Q8N960 986 aa8.92□□□□□ -0.98
NPHP3-211ENST00000515289 TMEM102Q8N9M5 508 aaPredicted RBP8.92□□□□□ -0.98
NPHP3-211ENST00000515289 TSR2Q969E8 191 aaKnown RBP8.92□□□□□ -0.98
NPHP3-211ENST00000515289 RPS6KC1Q96S38 1066 aa8.92□□□□□ -0.98
NPHP3-211ENST00000515289 MAGI1Q96QZ7 1491 aaPredicted RBP8.91□□□□□ -0.98
NPHP3-211ENST00000515289 CCDC163A0A0D9SF12 145 aa8.91□□□□□ -0.98
NPHP3-211ENST00000515289 METTL12A8MUP2 240 aa8.91□□□□□ -0.98
NPHP3-211ENST00000515289 CREB3O43889 395 aa8.91□□□□□ -0.98
NPHP3-211ENST00000515289 PSAPP07602 524 aa8.91□□□□□ -0.98
NPHP3-211ENST00000515289 FAM153BP0C7A2 387 aa8.91□□□□□ -0.98
NPHP3-211ENST00000515289 BMP6P22004 513 aa8.91□□□□□ -0.98
NPHP3-211ENST00000515289 GNALP38405 381 aa8.91□□□□□ -0.98
NPHP3-211ENST00000515289 UBE4AQ14139 1066 aa8.91□□□□□ -0.98
NPHP3-211ENST00000515289 C21orf62-AS1Q17RA5 79 aa8.91□□□□□ -0.98
NPHP3-211ENST00000515289 CT47A1Q5JQC4 288 aaPredicted RBP8.91□□□□□ -0.98
NPHP3-211ENST00000515289 RASIP1Q5U651 963 aa8.91□□□□□ -0.98
NPHP3-211ENST00000515289 LYSMD3Q7Z3D4 306 aa8.91□□□□□ -0.98
NPHP3-211ENST00000515289 TTC6Q86TZ1 520 aa8.91□□□□□ -0.98
NPHP3-211ENST00000515289 RNF217Q8TC41 542 aa8.91□□□□□ -0.98
NPHP3-211ENST00000515289 TM9SF2Q99805 663 aa8.91□□□□□ -0.98
NPHP3-211ENST00000515289 SPATA9Q9BWV2 254 aa8.91□□□□□ -0.98
NPHP3-211ENST00000515289 TLR7Q9NYK1 1049 aaKnown RBP8.91□□□□□ -0.98
NPHP3-211ENST00000515289 ZFATQ9P243 1243 aa8.91□□□□□ -0.98
NPHP3-211ENST00000515289 PCDHB14Q9Y5E9 798 aa8.91□□□□□ -0.98
NPHP3-211ENST00000515289 TIAM1Q13009 1591 aa8.9□□□□□ -0.98
NPHP3-211ENST00000515289 FYCO1Q9BQS8 1478 aa8.9□□□□□ -0.98
NPHP3-211ENST00000515289 CASKIN1Q8WXD9 1431 aa8.9□□□□□ -0.98
NPHP3-211ENST00000515289 NFKBIEO00221 500 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 161.3 ms