RNA–Protein interactions for RNA: ENST00000502706.1

RFC1-204, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-204ENST00000502706 TRIM55Q9BYV6 548 aa8.13□□□□□ -1.11
RFC1-204ENST00000502706 C12orf49Q9H741 205 aa8.13□□□□□ -1.11
RFC1-204ENST00000502706 LRFN2Q9ULH4 789 aa8.13□□□□□ -1.11
RFC1-204ENST00000502706 ZNF232Q9UNY5 417 aa8.13□□□□□ -1.11
RFC1-204ENST00000502706 KCNH4Q9UQ05 1017 aa8.13□□□□□ -1.11
RFC1-204ENST00000502706 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.13□□□□□ -1.11
RFC1-204ENST00000502706 CFAP43Q8NDM7 1665 aa8.12□□□□□ -1.11
RFC1-204ENST00000502706 CTTNBP2Q8WZ74 1663 aa8.12□□□□□ -1.11
RFC1-204ENST00000502706 CCDC194A0A1B0GVG4 234 aa8.12□□□□□ -1.11
RFC1-204ENST00000502706 ST13P50502 369 aaKnown RBP8.12□□□□□ -1.11
RFC1-204ENST00000502706 PSMA6P60900 246 aaKnown RBP8.12□□□□□ -1.11
RFC1-204ENST00000502706 SLC9A9Q8IVB4 645 aa8.12□□□□□ -1.11
RFC1-204ENST00000502706 CEP63Q96MT8 703 aa8.12□□□□□ -1.11
RFC1-204ENST00000502706 PCMTD2Q9NV79 361 aa8.12□□□□□ -1.11
RFC1-204ENST00000502706 DDX56Q9NY93 547 aaKnown RBP8.12□□□□□ -1.11
RFC1-204ENST00000502706 SLC6A14Q9UN76 642 aa8.12□□□□□ -1.11
RFC1-204ENST00000502706 OPLAHO14841 1288 aa8.11□□□□□ -1.11
RFC1-204ENST00000502706 CPNE3O75131 537 aaKnown RBP8.11□□□□□ -1.11
RFC1-204ENST00000502706 PEX14O75381 377 aa8.11□□□□□ -1.11
RFC1-204ENST00000502706 CHMP4BP1P59074 171 aa8.11□□□□□ -1.11
RFC1-204ENST00000502706 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.11□□□□□ -1.11
RFC1-204ENST00000502706 TBCELQ5QJ74 424 aa8.11□□□□□ -1.11
RFC1-204ENST00000502706 ILDR2Q71H61 639 aa8.11□□□□□ -1.11
RFC1-204ENST00000502706 RPUSD2Q8IZ73 545 aaKnown RBP8.11□□□□□ -1.11
RFC1-204ENST00000502706 UBE2OQ9C0C9 1292 aaKnown RBP8.11□□□□□ -1.11
RFC1-204ENST00000502706 ZNF408Q9H9D4 720 aa8.11□□□□□ -1.11
RFC1-204ENST00000502706 ANKIB1Q9P2G1 1089 aa8.11□□□□□ -1.11
RFC1-204ENST00000502706 MAGI3Q5TCQ9 1506 aa8.1□□□□□ -1.11
RFC1-204ENST00000502706 SERTM1A2A2V5 107 aa8.1□□□□□ -1.11
RFC1-204ENST00000502706 ZAP70P43403 619 aa8.1□□□□□ -1.11
RFC1-204ENST00000502706 AFF1P51825 1210 aaKnown RBP8.1□□□□□ -1.11
RFC1-204ENST00000502706 FAM26DQ5JW98 314 aa8.1□□□□□ -1.11
RFC1-204ENST00000502706 ERMP1Q7Z2K6 904 aa8.1□□□□□ -1.11
RFC1-204ENST00000502706 SLC51AQ86UW1 340 aa8.1□□□□□ -1.11
RFC1-204ENST00000502706 NUDT8Q8WV74 236 aa8.1□□□□□ -1.11
RFC1-204ENST00000502706 WFDC12Q8WWY7 111 aa8.1□□□□□ -1.11
RFC1-204ENST00000502706 BHMTQ93088 406 aa8.1□□□□□ -1.11
RFC1-204ENST00000502706 G3BP2Q9UN86 482 aaKnown RBP8.1□□□□□ -1.11
RFC1-204ENST00000502706 GOLGA3Q08378 1498 aa8.1□□□□□ -1.11
RFC1-204ENST00000502706 CD109Q6YHK3 1445 aa8.1□□□□□ -1.11
RFC1-204ENST00000502706 CDC45O75419 566 aa8.09□□□□□ -1.11
RFC1-204ENST00000502706 TBC1D8BQ0IIM8 1120 aa8.09□□□□□ -1.11
RFC1-204ENST00000502706 C11orf91Q3C1V1 193 aa8.09□□□□□ -1.11
RFC1-204ENST00000502706 MEI1Q5TIA1 1274 aa8.09□□□□□ -1.11
RFC1-204ENST00000502706 C1orf53Q5VUE5 145 aa8.09□□□□□ -1.11
RFC1-204ENST00000502706 TMED8Q6PL24 325 aaPredicted RBP8.09□□□□□ -1.11
RFC1-204ENST00000502706 ANKS3Q6ZW76 656 aa8.09□□□□□ -1.11
RFC1-204ENST00000502706 TICAM2Q86XR7 235 aa8.09□□□□□ -1.11
RFC1-204ENST00000502706 CCAR1Q8IX12 1150 aaKnown RBP8.09□□□□□ -1.11
RFC1-204ENST00000502706 DMRTC2Q8IXT2 367 aaPredicted RBP8.09□□□□□ -1.11
RFC1-204ENST00000502706 UBE2Q2Q8WVN8 375 aa8.09□□□□□ -1.11
RFC1-204ENST00000502706 CCDC136Q96JN2 1154 aa8.09□□□□□ -1.11
RFC1-204ENST00000502706 SPON2Q9BUD6 331 aa8.09□□□□□ -1.11
RFC1-204ENST00000502706 FAM8A1Q9UBU6 413 aa8.09□□□□□ -1.11
RFC1-204ENST00000502706 ABCA8O94911 1581 aa8.09□□□□□ -1.11
RFC1-204ENST00000502706 KIF21BO75037 1637 aa8.08□□□□□ -1.12
RFC1-204ENST00000502706 RPLP1P05386 114 aaKnown RBP8.08□□□□□ -1.12
RFC1-204ENST00000502706 TYRO3Q06418 890 aa8.08□□□□□ -1.12
RFC1-204ENST00000502706 C8orf34Q49A92 452 aa8.08□□□□□ -1.12
RFC1-204ENST00000502706 TAF7LQ5H9L4 462 aa8.08□□□□□ -1.12
RFC1-204ENST00000502706 LRP10Q7Z4F1 713 aa8.08□□□□□ -1.12
RFC1-204ENST00000502706 ETFBKMTQ8IXQ9 262 aa8.08□□□□□ -1.12
RFC1-204ENST00000502706 DTWD1Q8N5C7 304 aa8.08□□□□□ -1.12
RFC1-204ENST00000502706 NGLY1Q96IV0 654 aa8.08□□□□□ -1.12
RFC1-204ENST00000502706 DEPDC7Q96QD5 511 aa8.08□□□□□ -1.12
RFC1-204ENST00000502706 EFCC1Q9HA90 598 aa8.08□□□□□ -1.12
RFC1-204ENST00000502706 IREB2P48200 963 aaKnown RBP8.07□□□□□ -1.12
RFC1-204ENST00000502706 NASPP49321 788 aaPredicted RBP8.07□□□□□ -1.12
RFC1-204ENST00000502706 LCE1DQ5T752 114 aa8.07□□□□□ -1.12
RFC1-204ENST00000502706 SH3PXD2AQ5TCZ1 1133 aa8.07□□□□□ -1.12
RFC1-204ENST00000502706 PSAPL1Q6NUJ1 521 aa8.07□□□□□ -1.12
RFC1-204ENST00000502706 PRR23CQ6ZRP0 262 aa8.07□□□□□ -1.12
RFC1-204ENST00000502706 KIAA0825Q8IV33 1275 aa8.07□□□□□ -1.12
RFC1-204ENST00000502706 HSH2DQ96JZ2 352 aa8.07□□□□□ -1.12
RFC1-204ENST00000502706 KRTAP4-7Q9BYR0 210 aa8.07□□□□□ -1.12
RFC1-204ENST00000502706 OSBPL7Q9BZF2 842 aa8.07□□□□□ -1.12
RFC1-204ENST00000502706 IGFLR1Q9H665 355 aa8.07□□□□□ -1.12
RFC1-204ENST00000502706 PRDM16Q9HAZ2 1276 aa8.07□□□□□ -1.12
RFC1-204ENST00000502706 COPRSQ9NQ92 184 aa8.07□□□□□ -1.12
RFC1-204ENST00000502706 SNTG2Q9NY99 539 aa8.07□□□□□ -1.12
RFC1-204ENST00000502706 STRIP2Q9ULQ0 834 aa8.07□□□□□ -1.12
RFC1-204ENST00000502706 R3HCC1Q9Y3T6 440 aaKnown RBP8.07□□□□□ -1.12
RFC1-204ENST00000502706 RGS9O75916 674 aaPredicted RBP8.06□□□□□ -1.12
RFC1-204ENST00000502706 USP17L7P0C7H9 530 aa8.06□□□□□ -1.12
RFC1-204ENST00000502706 NOS3P29474 1203 aa8.06□□□□□ -1.12
RFC1-204ENST00000502706 RAB33AQ14088 237 aa8.06□□□□□ -1.12
RFC1-204ENST00000502706 ARSHQ5FYA8 562 aa8.06□□□□□ -1.12
RFC1-204ENST00000502706 FBXO11Q86XK2 927 aa8.06□□□□□ -1.12
RFC1-204ENST00000502706 SMC5Q8IY18 1101 aa8.06□□□□□ -1.12
RFC1-204ENST00000502706 STAG1Q8WVM7 1258 aa8.06□□□□□ -1.12
RFC1-204ENST00000502706 APPBP2Q92624 585 aa8.06□□□□□ -1.12
RFC1-204ENST00000502706 NUDT16Q96DE0 195 aaKnown RBP8.06□□□□□ -1.12
RFC1-204ENST00000502706 IFT43Q96FT9 208 aa8.06□□□□□ -1.12
RFC1-204ENST00000502706 SRCIN1Q9C0H9 1055 aa8.06□□□□□ -1.12
RFC1-204ENST00000502706 FANCLQ9NW38 375 aa8.06□□□□□ -1.12
RFC1-204ENST00000502706 ETFBP38117 255 aa8.05□□□□□ -1.12
RFC1-204ENST00000502706 IRAK1P51617 712 aa8.05□□□□□ -1.12
RFC1-204ENST00000502706 AMPD3Q01432 767 aa8.05□□□□□ -1.12
RFC1-204ENST00000502706 DGKZQ13574 1117 aa8.05□□□□□ -1.12
RFC1-204ENST00000502706 GPR152Q8TDT2 470 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms