RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 CEP120Q8N960 986 aa6.65□□□□□ -1.34
SOX2-OT-218ENST00000498731 KLHDC4Q8TBB5 520 aa6.65□□□□□ -1.34
SOX2-OT-218ENST00000498731 FAM163AQ96GL9 167 aaPredicted RBP6.65□□□□□ -1.34
SOX2-OT-218ENST00000498731 ACSBG1Q96GR2 724 aa6.65□□□□□ -1.34
SOX2-OT-218ENST00000498731 PARD6BQ9BYG5 372 aa6.65□□□□□ -1.34
SOX2-OT-218ENST00000498731 USP44Q9H0E7 712 aa6.65□□□□□ -1.34
SOX2-OT-218ENST00000498731 POLD4Q9HCU8 107 aa6.65□□□□□ -1.34
SOX2-OT-218ENST00000498731 DNAI1Q9UI46 699 aa6.65□□□□□ -1.34
SOX2-OT-218ENST00000498731 G3BP2Q9UN86 482 aaKnown RBP6.65□□□□□ -1.34
SOX2-OT-218ENST00000498731 KDRP35968 1356 aa6.65□□□□□ -1.34
SOX2-OT-218ENST00000498731 MON2Q7Z3U7 1717 aa6.65□□□□□ -1.34
SOX2-OT-218ENST00000498731 ANKRD26Q9UPS8 1709 aa6.65□□□□□ -1.34
SOX2-OT-218ENST00000498731 LRP6O75581 1613 aa6.65□□□□□ -1.34
SOX2-OT-218ENST00000498731 UPP2O95045 317 aa6.65□□□□□ -1.34
SOX2-OT-218ENST00000498731 A1BGP04217 495 aa6.65□□□□□ -1.34
SOX2-OT-218ENST00000498731 EVCP57679 992 aa6.65□□□□□ -1.34
SOX2-OT-218ENST00000498731 SNW1Q13573 536 aaKnown RBP6.65□□□□□ -1.34
SOX2-OT-218ENST00000498731 GPIHBP1Q8IV16 184 aa6.65□□□□□ -1.34
SOX2-OT-218ENST00000498731 PARP9Q8IXQ6 854 aa6.65□□□□□ -1.34
SOX2-OT-218ENST00000498731 RIN2Q8WYP3 895 aaPredicted RBP6.65□□□□□ -1.34
SOX2-OT-218ENST00000498731 EXOC4Q96A65 974 aa6.65□□□□□ -1.34
SOX2-OT-218ENST00000498731 ANO2Q9NQ90 1003 aa6.65□□□□□ -1.34
SOX2-OT-218ENST00000498731 PEAK1Q9H792 1746 aa6.65□□□□□ -1.35
SOX2-OT-218ENST00000498731 TRIM37O94972 964 aa6.65□□□□□ -1.35
SOX2-OT-218ENST00000498731 DSG3P32926 999 aa6.65□□□□□ -1.35
SOX2-OT-218ENST00000498731 NBPF10Q6P3W6 841 aaKnown RBP6.65□□□□□ -1.35
SOX2-OT-218ENST00000498731 TMEM87AQ8NBN3 555 aa6.65□□□□□ -1.35
SOX2-OT-218ENST00000498731 N4BP2L2Q92802 583 aaPredicted RBP6.65□□□□□ -1.35
SOX2-OT-218ENST00000498731 MAF1Q9H063 256 aa6.65□□□□□ -1.35
SOX2-OT-218ENST00000498731 SLC52A2Q9HAB3 445 aa6.65□□□□□ -1.35
SOX2-OT-218ENST00000498731 DACT1Q9NYF0 836 aa6.65□□□□□ -1.35
SOX2-OT-218ENST00000498731 CWC15Q9P013 229 aaKnown RBP6.65□□□□□ -1.35
SOX2-OT-218ENST00000498731 MKRN1Q9UHC7 482 aaKnown RBP6.65□□□□□ -1.35
SOX2-OT-218ENST00000498731 RTL1A6NKG5 1358 aa6.65□□□□□ -1.35
SOX2-OT-218ENST00000498731 A0A0U1RQJ8 604 aa6.64□□□□□ -1.35
SOX2-OT-218ENST00000498731 CPP00450 1065 aa6.64□□□□□ -1.35
SOX2-OT-218ENST00000498731 MYBL1P10243 752 aa6.64□□□□□ -1.35
SOX2-OT-218ENST00000498731 ACTN3Q08043 901 aaPredicted RBP6.64□□□□□ -1.35
SOX2-OT-218ENST00000498731 G3BP1Q13283 466 aaKnown RBP eCLIP6.64□□□□□ -1.35
SOX2-OT-218ENST00000498731 ARMCX5Q6P1M9 558 aa6.64□□□□□ -1.35
SOX2-OT-218ENST00000498731 ATRIPQ8WXE1 791 aa6.64□□□□□ -1.35
SOX2-OT-218ENST00000498731 SPACA7Q96KW9 195 aa6.64□□□□□ -1.35
SOX2-OT-218ENST00000498731 FMNL2Q96PY5 1086 aa6.64□□□□□ -1.35
SOX2-OT-218ENST00000498731 PIF1Q9H611 641 aa6.64□□□□□ -1.35
SOX2-OT-218ENST00000498731 RTEL1Q9NZ71 1219 aa6.64□□□□□ -1.35
SOX2-OT-218ENST00000498731 NR1I2O75469 434 aa6.64□□□□□ -1.35
SOX2-OT-218ENST00000498731 CCDC192P0DO97 292 aa6.64□□□□□ -1.35
SOX2-OT-218ENST00000498731 IL2RBP14784 551 aa6.64□□□□□ -1.35
SOX2-OT-218ENST00000498731 BDNFP23560 247 aa6.64□□□□□ -1.35
SOX2-OT-218ENST00000498731 TRIM65Q6PJ69 517 aa6.64□□□□□ -1.35
SOX2-OT-218ENST00000498731 UBE3BQ7Z3V4 1068 aa6.64□□□□□ -1.35
SOX2-OT-218ENST00000498731 ZNF483Q8TF39 744 aaPredicted RBP6.64□□□□□ -1.35
SOX2-OT-218ENST00000498731 UBXN4Q92575 508 aa6.64□□□□□ -1.35
SOX2-OT-218ENST00000498731 ZCWPW1Q9H0M4 648 aa6.64□□□□□ -1.35
SOX2-OT-218ENST00000498731 CCDC8Q9H0W5 538 aaPredicted RBP6.64□□□□□ -1.35
SOX2-OT-218ENST00000498731 TFIP11Q9UBB9 837 aaKnown RBP6.64□□□□□ -1.35
SOX2-OT-218ENST00000498731 AKAP12Q02952 1782 aa6.64□□□□□ -1.35
SOX2-OT-218ENST00000498731 SH3BP5O60239 455 aa6.64□□□□□ -1.35
SOX2-OT-218ENST00000498731 URI1O94763 535 aaPredicted RBP6.64□□□□□ -1.35
SOX2-OT-218ENST00000498731 SMC2O95347 1197 aa6.64□□□□□ -1.35
SOX2-OT-218ENST00000498731 ECEL1O95672 775 aa6.64□□□□□ -1.35
SOX2-OT-218ENST00000498731 SNRPA1P09661 255 aaKnown RBP6.64□□□□□ -1.35
SOX2-OT-218ENST00000498731 ZSCAN22P10073 491 aaPredicted RBP6.64□□□□□ -1.35
SOX2-OT-218ENST00000498731 LONRF2Q1L5Z9 754 aa6.64□□□□□ -1.35
SOX2-OT-218ENST00000498731 TMOD3Q9NYL9 352 aa6.64□□□□□ -1.35
SOX2-OT-218ENST00000498731 PRR12Q9ULL5 1215 aa6.64□□□□□ -1.35
SOX2-OT-218ENST00000498731 PARP3Q9Y6F1 533 aa6.64□□□□□ -1.35
SOX2-OT-218ENST00000498731 XIRP1Q702N8 1843 aaKnown RBP6.64□□□□□ -1.35
SOX2-OT-218ENST00000498731 PIK3C2AO00443 1686 aa6.63□□□□□ -1.35
SOX2-OT-218ENST00000498731 GPTP24298 496 aa6.63□□□□□ -1.35
SOX2-OT-218ENST00000498731 ATP8B2P98198 1209 aa6.63□□□□□ -1.35
SOX2-OT-218ENST00000498731 PPARDQ03181 441 aa6.63□□□□□ -1.35
SOX2-OT-218ENST00000498731 ST3GAL1Q11201 340 aa6.63□□□□□ -1.35
SOX2-OT-218ENST00000498731 C1QTNF12Q5T7M4 302 aa6.63□□□□□ -1.35
SOX2-OT-218ENST00000498731 ANKRD13DQ6ZTN6 518 aa6.63□□□□□ -1.35
SOX2-OT-218ENST00000498731 UPF1Q92900 1129 aaKnown RBP eCLIP6.63□□□□□ -1.35
SOX2-OT-218ENST00000498731 DCAF5Q96JK2 942 aa6.63□□□□□ -1.35
SOX2-OT-218ENST00000498731 WDR24Q96S15 920 aa6.63□□□□□ -1.35
SOX2-OT-218ENST00000498731 PNKPQ96T60 521 aa6.63□□□□□ -1.35
SOX2-OT-218ENST00000498731 A0A087WZG4 1122 aa6.63□□□□□ -1.35
SOX2-OT-218ENST00000498731 F13A1P00488 732 aa6.63□□□□□ -1.35
SOX2-OT-218ENST00000498731 TPM3P06753 285 aa6.63□□□□□ -1.35
SOX2-OT-218ENST00000498731 ARID4AP29374 1257 aaPredicted RBP6.63□□□□□ -1.35
SOX2-OT-218ENST00000498731 ZNF165P49910 485 aa6.63□□□□□ -1.35
SOX2-OT-218ENST00000498731 KSR2Q6VAB6 950 aa6.63□□□□□ -1.35
SOX2-OT-218ENST00000498731 KRT27Q7Z3Y8 459 aa6.63□□□□□ -1.35
SOX2-OT-218ENST00000498731 CNNM3Q8NE01 707 aa6.63□□□□□ -1.35
SOX2-OT-218ENST00000498731 ZKSCAN4Q969J2 545 aaPredicted RBP6.63□□□□□ -1.35
SOX2-OT-218ENST00000498731 NEUROD6Q96NK8 337 aa6.63□□□□□ -1.35
SOX2-OT-218ENST00000498731 IRX2Q9BZI1 471 aaPredicted RBP6.63□□□□□ -1.35
SOX2-OT-218ENST00000498731 HYPKQ9NX55 129 aa6.63□□□□□ -1.35
SOX2-OT-218ENST00000498731 NALCNQ8IZF0 1738 aa6.63□□□□□ -1.35
SOX2-OT-218ENST00000498731 CCDC171Q6TFL3 1326 aa6.63□□□□□ -1.35
SOX2-OT-218ENST00000498731 H0YHG0 523 aa6.63□□□□□ -1.35
SOX2-OT-218ENST00000498731 PYGLP06737 847 aa6.63□□□□□ -1.35
SOX2-OT-218ENST00000498731 ELF1P32519 619 aa6.63□□□□□ -1.35
SOX2-OT-218ENST00000498731 SARNPP82979 210 aaKnown RBP6.63□□□□□ -1.35
SOX2-OT-218ENST00000498731 EN1Q05925 392 aaPredicted RBP6.63□□□□□ -1.35
SOX2-OT-218ENST00000498731 USP4Q13107 963 aa6.63□□□□□ -1.35
SOX2-OT-218ENST00000498731 GPS2Q13227 327 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms