RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 CNBD1Q8NA66 436 aa12.75□□□□□ -0.37
RAB11FIP3-211ENST00000495663 ADAM32Q8TC27 787 aa12.75□□□□□ -0.37
RAB11FIP3-211ENST00000495663 CLUAP1Q96AJ1 413 aa12.75□□□□□ -0.37
RAB11FIP3-211ENST00000495663 UTP14AQ9BVJ6 771 aaKnown RBP12.75□□□□□ -0.37
RAB11FIP3-211ENST00000495663 PGPEP1Q9NXJ5 209 aa12.75□□□□□ -0.37
RAB11FIP3-211ENST00000495663 TRMT112Q9UI30 125 aaKnown RBP12.75□□□□□ -0.37
RAB11FIP3-211ENST00000495663 ZC3H4Q9UPT8 1303 aaKnown RBP12.75□□□□□ -0.37
RAB11FIP3-211ENST00000495663 MYH3P11055 1940 aa12.74□□□□□ -0.37
RAB11FIP3-211ENST00000495663 ANKRD31Q8N7Z5 1873 aa12.74□□□□□ -0.37
RAB11FIP3-211ENST00000495663 DDX60Q8IY21 1712 aaKnown RBP12.74□□□□□ -0.37
RAB11FIP3-211ENST00000495663 CENPBP07199 599 aaPredicted RBP12.74□□□□□ -0.37
RAB11FIP3-211ENST00000495663 RFC5P40937 340 aa12.74□□□□□ -0.37
RAB11FIP3-211ENST00000495663 RAB15P59190 212 aa12.74□□□□□ -0.37
RAB11FIP3-211ENST00000495663 ST5P78524 1137 aa12.74□□□□□ -0.37
RAB11FIP3-211ENST00000495663 PRR5LQ6MZQ0 368 aa12.74□□□□□ -0.37
RAB11FIP3-211ENST00000495663 DZIP1LQ8IYY4 767 aaKnown RBP12.74□□□□□ -0.37
RAB11FIP3-211ENST00000495663 TNNQ9UQP3 1299 aa12.74□□□□□ -0.37
RAB11FIP3-211ENST00000495663 SH3TC1Q8TE82 1336 aa12.73□□□□□ -0.37
RAB11FIP3-211ENST00000495663 PLIN1O60240 522 aa12.73□□□□□ -0.37
RAB11FIP3-211ENST00000495663 RRP1P56182 461 aaKnown RBP12.73□□□□□ -0.37
RAB11FIP3-211ENST00000495663 GCKRQ14397 625 aa12.73□□□□□ -0.37
RAB11FIP3-211ENST00000495663 INTS6LQ5JSJ4 861 aaKnown RBP12.73□□□□□ -0.37
RAB11FIP3-211ENST00000495663 INTS3Q68E01 1043 aaKnown RBP12.73□□□□□ -0.37
RAB11FIP3-211ENST00000495663 ZBTB38Q8NAP3 1195 aaPredicted RBP12.73□□□□□ -0.37
RAB11FIP3-211ENST00000495663 PPP1R1BQ9UD71 204 aaPredicted RBP12.73□□□□□ -0.37
RAB11FIP3-211ENST00000495663 C10orf71Q711Q0 1435 aa12.72□□□□□ -0.37
RAB11FIP3-211ENST00000495663 PCCAP05165 728 aaPredicted RBP12.72□□□□□ -0.37
RAB11FIP3-211ENST00000495663 LORP23490 312 aaPredicted RBP12.72□□□□□ -0.37
RAB11FIP3-211ENST00000495663 ZSCAN1Q8NBB4 408 aa12.72□□□□□ -0.37
RAB11FIP3-211ENST00000495663 FAM89AQ96GI7 184 aa12.72□□□□□ -0.37
RAB11FIP3-211ENST00000495663 C9orf78Q9NZ63 289 aaPredicted RBP12.72□□□□□ -0.37
RAB11FIP3-211ENST00000495663 RIC1Q4ADV7 1423 aa12.71□□□□□ -0.37
RAB11FIP3-211ENST00000495663 TNRC6CQ9HCJ0 1690 aaKnown RBP12.71□□□□□ -0.37
RAB11FIP3-211ENST00000495663 FIGNL2A6NMB9 653 aa12.71□□□□□ -0.37
RAB11FIP3-211ENST00000495663 TTLL8A6PVC2 850 aa12.71□□□□□ -0.37
RAB11FIP3-211ENST00000495663 H7C1W4 665 aa12.71□□□□□ -0.37
RAB11FIP3-211ENST00000495663 GRM8O00222 908 aa12.71□□□□□ -0.37
RAB11FIP3-211ENST00000495663 PPFIA3O75145 1194 aa12.71□□□□□ -0.37
RAB11FIP3-211ENST00000495663 HSP90B1P14625 803 aaKnown RBP12.71□□□□□ -0.37
RAB11FIP3-211ENST00000495663 PDE3AQ14432 1141 aa12.71□□□□□ -0.37
RAB11FIP3-211ENST00000495663 TMEM57Q8N5G2 664 aa12.71□□□□□ -0.37
RAB11FIP3-211ENST00000495663 AGBL1Q96MI9 1066 aa12.71□□□□□ -0.37
RAB11FIP3-211ENST00000495663 CDV3Q9UKY7 258 aaKnown RBP12.71□□□□□ -0.37
RAB11FIP3-211ENST00000495663 DLEC1Q9Y238 1755 aa12.71□□□□□ -0.38
RAB11FIP3-211ENST00000495663 ABCC12Q96J65 1359 aa12.7□□□□□ -0.38
RAB11FIP3-211ENST00000495663 CDHR2Q9BYE9 1310 aa12.7□□□□□ -0.38
RAB11FIP3-211ENST00000495663 RLBP1P12271 317 aa12.7□□□□□ -0.38
RAB11FIP3-211ENST00000495663 UBE3BQ7Z3V4 1068 aa12.7□□□□□ -0.38
RAB11FIP3-211ENST00000495663 PANK1Q8TE04 598 aa12.7□□□□□ -0.38
RAB11FIP3-211ENST00000495663 BRIP1Q9BX63 1249 aa12.7□□□□□ -0.38
RAB11FIP3-211ENST00000495663 SUPT16HQ9Y5B9 1047 aaKnown RBP12.7□□□□□ -0.38
RAB11FIP3-211ENST00000495663 KIAA1551Q9HCM1 1747 aa12.7□□□□□ -0.38
RAB11FIP3-211ENST00000495663 COL11A2P13942 1736 aaPredicted RBP12.69□□□□□ -0.38
RAB11FIP3-211ENST00000495663 IRS4O14654 1257 aaPredicted RBP12.69□□□□□ -0.38
RAB11FIP3-211ENST00000495663 PDE6BP35913 854 aa12.69□□□□□ -0.38
RAB11FIP3-211ENST00000495663 SLC10A5Q5PT55 438 aa12.69□□□□□ -0.38
RAB11FIP3-211ENST00000495663 Q6ZVU0 165 aa12.69□□□□□ -0.38
RAB11FIP3-211ENST00000495663 ITPRIPQ8IWB1 547 aa12.69□□□□□ -0.38
RAB11FIP3-211ENST00000495663 SYNE4Q8N205 404 aa12.69□□□□□ -0.38
RAB11FIP3-211ENST00000495663 JARID2Q92833 1246 aaPredicted RBP12.69□□□□□ -0.38
RAB11FIP3-211ENST00000495663 CD2APQ9Y5K6 639 aa12.69□□□□□ -0.38
RAB11FIP3-211ENST00000495663 UTYO14607 1347 aa12.68□□□□□ -0.38
RAB11FIP3-211ENST00000495663 CACNA1SQ13698 1873 aa12.68□□□□□ -0.38
RAB11FIP3-211ENST00000495663 VSIG8P0DPA2 414 aa12.68□□□□□ -0.38
RAB11FIP3-211ENST00000495663 HCLS1P14317 486 aaPredicted RBP12.68□□□□□ -0.38
RAB11FIP3-211ENST00000495663 CASP7P55210 303 aa12.68□□□□□ -0.38
RAB11FIP3-211ENST00000495663 RELBQ01201 579 aa12.68□□□□□ -0.38
RAB11FIP3-211ENST00000495663 DHX9Q08211 1270 aaKnown RBP12.68□□□□□ -0.38
RAB11FIP3-211ENST00000495663 MVPQ14764 893 aaKnown RBP12.68□□□□□ -0.38
RAB11FIP3-211ENST00000495663 IL27Q8NEV9 243 aa12.68□□□□□ -0.38
RAB11FIP3-211ENST00000495663 PCMTD1Q96MG8 357 aaPredicted RBP12.68□□□□□ -0.38
RAB11FIP3-211ENST00000495663 NLRP3Q96P20 1036 aa12.68□□□□□ -0.38
RAB11FIP3-211ENST00000495663 USP44Q9H0E7 712 aa12.68□□□□□ -0.38
RAB11FIP3-211ENST00000495663 TMPRSS4Q9NRS4 437 aa12.68□□□□□ -0.38
RAB11FIP3-211ENST00000495663 HDAC5Q9UQL6 1122 aa12.68□□□□□ -0.38
RAB11FIP3-211ENST00000495663 GPSM3Q9Y4H4 160 aa12.68□□□□□ -0.38
RAB11FIP3-211ENST00000495663 PDE8AO60658 829 aa12.67□□□□□ -0.38
RAB11FIP3-211ENST00000495663 GNAI3P08754 354 aa12.67□□□□□ -0.38
RAB11FIP3-211ENST00000495663 NBPF7P0C2Y1 421 aaPredicted RBP12.67□□□□□ -0.38
RAB11FIP3-211ENST00000495663 UBTFL1P0CB47 393 aaPredicted RBP12.67□□□□□ -0.38
RAB11FIP3-211ENST00000495663 TGFB2P61812 414 aa12.67□□□□□ -0.38
RAB11FIP3-211ENST00000495663 C20orf194Q5TEA3 1177 aa12.67□□□□□ -0.38
RAB11FIP3-211ENST00000495663 PNMA1Q8ND90 353 aa12.67□□□□□ -0.38
RAB11FIP3-211ENST00000495663 FHDC1Q9C0D6 1143 aaPredicted RBP12.67□□□□□ -0.38
RAB11FIP3-211ENST00000495663 DDX19BQ9UMR2 479 aa12.67□□□□□ -0.38
RAB11FIP3-211ENST00000495663 COG6Q9Y2V7 657 aa12.67□□□□□ -0.38
RAB11FIP3-211ENST00000495663 BRCA1P38398 1863 aaKnown RBP12.67□□□□□ -0.38
RAB11FIP3-211ENST00000495663 KLRG2A4D1S0 409 aaPredicted RBP12.66□□□□□ -0.38
RAB11FIP3-211ENST00000495663 H0YIN7 160 aa12.66□□□□□ -0.38
RAB11FIP3-211ENST00000495663 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.66□□□□□ -0.38
RAB11FIP3-211ENST00000495663 MEIS3Q99687 375 aa12.66□□□□□ -0.38
RAB11FIP3-211ENST00000495663 PLA2G12BQ9BX93 195 aa12.66□□□□□ -0.38
RAB11FIP3-211ENST00000495663 TRIM34Q9BYJ4 488 aa12.66□□□□□ -0.38
RAB11FIP3-211ENST00000495663 CHMP4BQ9H444 224 aaKnown RBP12.66□□□□□ -0.38
RAB11FIP3-211ENST00000495663 SPINT1O43278 529 aa12.65□□□□□ -0.38
RAB11FIP3-211ENST00000495663 CTSWP56202 376 aa12.65□□□□□ -0.38
RAB11FIP3-211ENST00000495663 NBPF20Q3BBV1 942 aa12.65□□□□□ -0.38
RAB11FIP3-211ENST00000495663 C2CD5Q86YS7 1000 aa12.65□□□□□ -0.38
RAB11FIP3-211ENST00000495663 RPGRQ92834 1020 aaKnown RBP12.65□□□□□ -0.38
RAB11FIP3-211ENST00000495663 SUCLG2Q96I99 432 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms