RNA–Protein interactions for RNA: ENST00000487002.1

FDPS-212, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 2,017 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-212ENST00000487002 ZNF165P49910 485 aa19.73■□□□□ 0.75
FDPS-212ENST00000487002 BCAMP50895 628 aa19.73■□□□□ 0.75
FDPS-212ENST00000487002 KIF23Q02241 960 aaPredicted RBP19.73■□□□□ 0.75
FDPS-212ENST00000487002 AKNAD1Q5T1N1 836 aa19.73■□□□□ 0.75
FDPS-212ENST00000487002 FSIP1Q8NA03 581 aa19.73■□□□□ 0.75
FDPS-212ENST00000487002 ARMT1Q9H993 441 aa19.73■□□□□ 0.75
FDPS-212ENST00000487002 ZBTB43O43298 467 aa19.73■□□□□ 0.75
FDPS-212ENST00000487002 PLCB2Q00722 1185 aa19.73■□□□□ 0.75
FDPS-212ENST00000487002 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.73■□□□□ 0.75
FDPS-212ENST00000487002 STAG1Q8WVM7 1258 aa19.73■□□□□ 0.75
FDPS-212ENST00000487002 DENND2AQ9ULE3 1009 aa19.73■□□□□ 0.75
FDPS-212ENST00000487002 PCDHA7Q9UN72 937 aa19.73■□□□□ 0.75
FDPS-212ENST00000487002 NUTM2BA6NNL0 878 aaPredicted RBP19.72■□□□□ 0.75
FDPS-212ENST00000487002 NUTM2EB1AL46 878 aaPredicted RBP19.72■□□□□ 0.75
FDPS-212ENST00000487002 STK38Q15208 465 aa19.72■□□□□ 0.75
FDPS-212ENST00000487002 TMEM67Q5HYA8 995 aa19.72■□□□□ 0.75
FDPS-212ENST00000487002 NUTM2AQ8IVF1 878 aaPredicted RBP19.72■□□□□ 0.75
FDPS-212ENST00000487002 GNL3LQ9NVN8 582 aaKnown RBP19.72■□□□□ 0.75
FDPS-212ENST00000487002 SNAP23O00161 211 aa19.71■□□□□ 0.75
FDPS-212ENST00000487002 UBE4AQ14139 1066 aa19.71■□□□□ 0.75
FDPS-212ENST00000487002 ANKRD18AQ8IVF6 992 aa19.71■□□□□ 0.75
FDPS-212ENST00000487002 LINC00116Q8NCU8 138 aa19.71■□□□□ 0.75
FDPS-212ENST00000487002 RCAN1P53805 252 aa19.71■□□□□ 0.75
FDPS-212ENST00000487002 OTUD7BQ6GQQ9 843 aa19.71■□□□□ 0.75
FDPS-212ENST00000487002 SYNE3Q6ZMZ3 975 aa19.71■□□□□ 0.75
FDPS-212ENST00000487002 MFSD6Q6ZSS7 791 aa19.71■□□□□ 0.75
FDPS-212ENST00000487002 FMR1NBQ8N0W7 255 aaPredicted RBP19.71■□□□□ 0.75
FDPS-212ENST00000487002 LCORLQ8N3X6 602 aa19.71■□□□□ 0.75
FDPS-212ENST00000487002 ALG1Q9BT22 464 aa19.71■□□□□ 0.75
FDPS-212ENST00000487002 DNAJC25Q9H1X3 360 aa19.71■□□□□ 0.75
FDPS-212ENST00000487002 BSDC1Q9NW68 430 aaPredicted RBP19.71■□□□□ 0.75
FDPS-212ENST00000487002 CACNA1SQ13698 1873 aa19.7■□□□□ 0.74
FDPS-212ENST00000487002 GOLGA8AA7E2F4 631 aa19.7■□□□□ 0.74
FDPS-212ENST00000487002 SPTLC2O15270 562 aa19.7■□□□□ 0.74
FDPS-212ENST00000487002 KCNQ2O43526 872 aa19.7■□□□□ 0.74
FDPS-212ENST00000487002 SF3A1Q15459 793 aaKnown RBP19.7■□□□□ 0.74
FDPS-212ENST00000487002 NTRK3Q16288 839 aa19.7■□□□□ 0.74
FDPS-212ENST00000487002 NFXL1Q6ZNB6 911 aa19.7■□□□□ 0.74
FDPS-212ENST00000487002 RAB11FIP4Q86YS3 637 aa19.7■□□□□ 0.74
FDPS-212ENST00000487002 NKX2-3Q8TAU0 364 aa19.7■□□□□ 0.74
FDPS-212ENST00000487002 RNF41Q9H4P4 317 aaPredicted RBP19.7■□□□□ 0.74
FDPS-212ENST00000487002 LRP2BPQ9P2M1 347 aa19.7■□□□□ 0.74
FDPS-212ENST00000487002 SLC4A4Q9Y6R1 1079 aa19.7■□□□□ 0.74
FDPS-212ENST00000487002 NHSQ6T4R5 1651 aa19.7■□□□□ 0.74
FDPS-212ENST00000487002 MYH13Q9UKX3 1938 aa19.7■□□□□ 0.74
FDPS-212ENST00000487002 TDO2P48775 406 aa19.69■□□□□ 0.74
FDPS-212ENST00000487002 SART3Q15020 963 aaKnown RBP19.69■□□□□ 0.74
FDPS-212ENST00000487002 SLC10A5Q5PT55 438 aa19.69■□□□□ 0.74
FDPS-212ENST00000487002 MICU3Q86XE3 530 aa19.69■□□□□ 0.74
FDPS-212ENST00000487002 PLA2G4DQ86XP0 818 aa19.69■□□□□ 0.74
FDPS-212ENST00000487002 SLC12A7Q9Y666 1083 aa19.69■□□□□ 0.74
FDPS-212ENST00000487002 CLIC4Q9Y696 253 aa19.69■□□□□ 0.74
FDPS-212ENST00000487002 KIF28PB7ZC32 967 aa19.69■□□□□ 0.74
FDPS-212ENST00000487002 IFIT3O14879 490 aaKnown RBP19.69■□□□□ 0.74
FDPS-212ENST00000487002 POLR3DP05423 398 aaPredicted RBP19.69■□□□□ 0.74
FDPS-212ENST00000487002 CDC27P30260 824 aa19.69■□□□□ 0.74
FDPS-212ENST00000487002 VPS72Q15906 364 aa19.69■□□□□ 0.74
FDPS-212ENST00000487002 ERFEQ4G0M1 354 aa19.69■□□□□ 0.74
FDPS-212ENST00000487002 ANO1Q5XXA6 986 aa19.69■□□□□ 0.74
FDPS-212ENST00000487002 TTC12Q9H892 705 aaPredicted RBP19.69■□□□□ 0.74
FDPS-212ENST00000487002 ANO10Q9NW15 660 aa19.69■□□□□ 0.74
FDPS-212ENST00000487002 ZSWIM5Q9P217 1185 aa19.69■□□□□ 0.74
FDPS-212ENST00000487002 BTAF1O14981 1849 aa19.68■□□□□ 0.74
FDPS-212ENST00000487002 CCDC69A6NI79 296 aa19.68■□□□□ 0.74
FDPS-212ENST00000487002 IARSP41252 1262 aaKnown RBP19.68■□□□□ 0.74
FDPS-212ENST00000487002 CTDSPL2Q05D32 466 aa19.68■□□□□ 0.74
FDPS-212ENST00000487002 SARM1Q6SZW1 724 aa19.68■□□□□ 0.74
FDPS-212ENST00000487002 WASF1Q92558 559 aa19.68■□□□□ 0.74
FDPS-212ENST00000487002 SPTLC3Q9NUV7 552 aa19.68■□□□□ 0.74
FDPS-212ENST00000487002 MAST2Q6P0Q8 1798 aa19.68■□□□□ 0.74
FDPS-212ENST00000487002 CDC25BP30305 580 aa19.68■□□□□ 0.74
FDPS-212ENST00000487002 ZNF75DP51815 510 aa19.68■□□□□ 0.74
FDPS-212ENST00000487002 IQCB1Q15051 598 aa19.68■□□□□ 0.74
FDPS-212ENST00000487002 RC3H1Q5TC82 1133 aaKnown RBP19.68■□□□□ 0.74
FDPS-212ENST00000487002 KRT40Q6A162 431 aa19.68■□□□□ 0.74
FDPS-212ENST00000487002 SENP2Q9HC62 589 aa19.68■□□□□ 0.74
FDPS-212ENST00000487002 COL1A1P02452 1464 aaPredicted RBP19.67■□□□□ 0.74
FDPS-212ENST00000487002 TOM1O60784 492 aa19.67■□□□□ 0.74
FDPS-212ENST00000487002 VPS37DQ86XT2 251 aa19.67■□□□□ 0.74
FDPS-212ENST00000487002 TMTC2Q8N394 836 aa19.67■□□□□ 0.74
FDPS-212ENST00000487002 NYXQ9GZU5 481 aa19.67■□□□□ 0.74
FDPS-212ENST00000487002 FAM217BQ9NTX9 383 aaPredicted RBP19.67■□□□□ 0.74
FDPS-212ENST00000487002 ANAPC4Q9UJX5 808 aa19.67■□□□□ 0.74
FDPS-212ENST00000487002 TAF1P21675 1872 aa19.67■□□□□ 0.74
FDPS-212ENST00000487002 PDS5AQ29RF7 1337 aaKnown RBP19.67■□□□□ 0.74
FDPS-212ENST00000487002 GOLGA6L19H0YKK7 550 aa19.66■□□□□ 0.74
FDPS-212ENST00000487002 SEMA3EO15041 775 aa19.66■□□□□ 0.74
FDPS-212ENST00000487002 PRKAB2O43741 272 aa19.66■□□□□ 0.74
FDPS-212ENST00000487002 IFNAR1P17181 557 aa19.66■□□□□ 0.74
FDPS-212ENST00000487002 TRIM29Q14134 588 aa19.66■□□□□ 0.74
FDPS-212ENST00000487002 SLC39A14Q15043 492 aa19.66■□□□□ 0.74
FDPS-212ENST00000487002 ZNF830Q96NB3 372 aaPredicted RBP19.66■□□□□ 0.74
FDPS-212ENST00000487002 THSD7AQ9UPZ6 1657 aa19.66■□□□□ 0.74
FDPS-212ENST00000487002 RANBP6O60518 1105 aaKnown RBP19.66■□□□□ 0.74
FDPS-212ENST00000487002 FMNL1O95466 1100 aaPredicted RBP19.66■□□□□ 0.74
FDPS-212ENST00000487002 CYP7A1P22680 504 aa19.66■□□□□ 0.74
FDPS-212ENST00000487002 U2AF2P26368 475 aaKnown RBP eCLIP19.66■□□□□ 0.744e-6■□□□□ 10.9
FDPS-212ENST00000487002 NOLC1Q14978 699 aaKnown RBP eCLIP19.66■□□□□ 0.745e-6■□□□□ 8.1
FDPS-212ENST00000487002 FAM98CQ17RN3 349 aaKnown RBP19.66■□□□□ 0.74
FDPS-212ENST00000487002 CAVIN4Q5BKX8 364 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms