RNA–Protein interactions for RNA: ENST00000477403.1

RPL39-203, Transcript of ribosomal protein L39, humanhuman

TSL 3

Gene RPL39, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-203ENST00000477403 TRIM42Q8IWZ5 723 aa6.18□□□□□ -1.42
RPL39-203ENST00000477403 FAM20CQ8IXL6 584 aa6.18□□□□□ -1.42
RPL39-203ENST00000477403 C7orf69Q9H7B7 122 aa6.18□□□□□ -1.42
RPL39-203ENST00000477403 ZFP64Q9NPA5 681 aa6.18□□□□□ -1.42
RPL39-203ENST00000477403 NLRP2Q9NX02 1062 aa6.18□□□□□ -1.42
RPL39-203ENST00000477403 TRAK1Q9UPV9 953 aa6.18□□□□□ -1.42
RPL39-203ENST00000477403 HECW2Q9P2P5 1572 aa6.18□□□□□ -1.42
RPL39-203ENST00000477403 RUSC2Q8N2Y8 1516 aa6.17□□□□□ -1.42
RPL39-203ENST00000477403 PNMA6FA0A0J9YX94 578 aa6.17□□□□□ -1.42
RPL39-203ENST00000477403 TMEM238LA0A1B0GVL6 79 aa6.17□□□□□ -1.42
RPL39-203ENST00000477403 B3GALT4O96024 378 aa6.17□□□□□ -1.42
RPL39-203ENST00000477403 DRD2P14416 443 aa6.17□□□□□ -1.42
RPL39-203ENST00000477403 RXRBP28702 533 aa6.17□□□□□ -1.42
RPL39-203ENST00000477403 ZNF157P51786 506 aaPredicted RBP6.17□□□□□ -1.42
RPL39-203ENST00000477403 SGO2Q562F6 1265 aa6.17□□□□□ -1.42
RPL39-203ENST00000477403 ARTNQ5T4W7 220 aa6.17□□□□□ -1.42
RPL39-203ENST00000477403 PRPF40BQ6NWY9 871 aaKnown RBP6.17□□□□□ -1.42
RPL39-203ENST00000477403 BEND4Q6ZU67 534 aa6.17□□□□□ -1.42
RPL39-203ENST00000477403 SMG8Q8ND04 991 aaKnown RBP6.17□□□□□ -1.42
RPL39-203ENST00000477403 DDX54Q8TDD1 881 aaKnown RBP6.17□□□□□ -1.42
RPL39-203ENST00000477403 CORO1BQ9BR76 489 aa6.17□□□□□ -1.42
RPL39-203ENST00000477403 TRAIPQ9BWF2 469 aa6.17□□□□□ -1.42
RPL39-203ENST00000477403 NRSN2Q9GZP1 204 aa6.17□□□□□ -1.42
RPL39-203ENST00000477403 RNF112Q9ULX5 631 aa6.17□□□□□ -1.42
RPL39-203ENST00000477403 HIF3AQ9Y2N7 669 aa6.17□□□□□ -1.42
RPL39-203ENST00000477403 UACAQ9BZF9 1416 aa6.16□□□□□ -1.42
RPL39-203ENST00000477403 TREHO43280 583 aa6.16□□□□□ -1.42
RPL39-203ENST00000477403 ECEL1O95672 775 aa6.16□□□□□ -1.42
RPL39-203ENST00000477403 CTSBP07858 339 aa6.16□□□□□ -1.42
RPL39-203ENST00000477403 MAPK8P45983 427 aa6.16□□□□□ -1.42
RPL39-203ENST00000477403 FCGRTP55899 365 aa6.16□□□□□ -1.42
RPL39-203ENST00000477403 NFIAQ12857 509 aa6.16□□□□□ -1.42
RPL39-203ENST00000477403 LRP8Q14114 963 aa6.16□□□□□ -1.42
RPL39-203ENST00000477403 DSC3Q14574 896 aa6.16□□□□□ -1.42
RPL39-203ENST00000477403 DTHD1Q6ZMT9 781 aa6.16□□□□□ -1.42
RPL39-203ENST00000477403 SLC51AQ86UW1 340 aa6.16□□□□□ -1.42
RPL39-203ENST00000477403 CLEC10AQ8IUN9 316 aa6.16□□□□□ -1.42
RPL39-203ENST00000477403 ZSCAN29Q8IWY8 852 aaPredicted RBP6.16□□□□□ -1.42
RPL39-203ENST00000477403 GLIS3Q8NEA6 775 aa6.16□□□□□ -1.42
RPL39-203ENST00000477403 FAM83CQ9BQN1 747 aa6.16□□□□□ -1.42
RPL39-203ENST00000477403 TRIM56Q9BRZ2 755 aaKnown RBP6.16□□□□□ -1.42
RPL39-203ENST00000477403 SUGCTQ9HAC7 445 aa6.16□□□□□ -1.42
RPL39-203ENST00000477403 TTBK1Q5TCY1 1321 aaPredicted RBP6.16□□□□□ -1.42
RPL39-203ENST00000477403 KIF27Q86VH2 1401 aa6.16□□□□□ -1.42
RPL39-203ENST00000477403 BIVM-ERCC5R4GMW8 1640 aa6.15□□□□□ -1.42
RPL39-203ENST00000477403 TIAF1O95411 115 aa6.15□□□□□ -1.42
RPL39-203ENST00000477403 MAP4P27816 1152 aaKnown RBP6.15□□□□□ -1.42
RPL39-203ENST00000477403 USP11P51784 963 aa6.15□□□□□ -1.42
RPL39-203ENST00000477403 PTPN12Q05209 780 aaKnown RBP6.15□□□□□ -1.42
RPL39-203ENST00000477403 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.15□□□□□ -1.421e-11■■■■■ 65.1
RPL39-203ENST00000477403 RNF43Q68DV7 783 aa6.15□□□□□ -1.42
RPL39-203ENST00000477403 NPM2Q86SE8 214 aaKnown RBP6.15□□□□□ -1.42
RPL39-203ENST00000477403 BCO2Q9BYV7 579 aa6.15□□□□□ -1.42
RPL39-203ENST00000477403 RAD18Q9NS91 495 aa6.15□□□□□ -1.42
RPL39-203ENST00000477403 PPP4R2Q9NY27 417 aa6.15□□□□□ -1.42
RPL39-203ENST00000477403 CARMIL1Q5VZK9 1371 aa6.15□□□□□ -1.43
RPL39-203ENST00000477403 EPRSP07814 1512 aaKnown RBP6.15□□□□□ -1.43
RPL39-203ENST00000477403 PATL2C9JE40 543 aaKnown RBP6.14□□□□□ -1.43
RPL39-203ENST00000477403 HYAL3O43820 417 aaPredicted RBP6.14□□□□□ -1.43
RPL39-203ENST00000477403 SOX4Q06945 474 aaPredicted RBP6.14□□□□□ -1.43
RPL39-203ENST00000477403 FAAP100Q0VG06 881 aa6.14□□□□□ -1.43
RPL39-203ENST00000477403 PDE3AQ14432 1141 aa6.14□□□□□ -1.43
RPL39-203ENST00000477403 ENOX2Q16206 610 aaKnown RBP6.14□□□□□ -1.43
RPL39-203ENST00000477403 AKAP4Q5JQC9 854 aa6.14□□□□□ -1.43
RPL39-203ENST00000477403 HP1BP3Q5SSJ5 553 aaPredicted RBP6.14□□□□□ -1.43
RPL39-203ENST00000477403 NBPF11Q86T75 865 aa6.14□□□□□ -1.43
RPL39-203ENST00000477403 DBNDD2Q9BQY9 259 aa6.14□□□□□ -1.43
RPL39-203ENST00000477403 ZFYVE1Q9HBF4 777 aa6.14□□□□□ -1.43
RPL39-203ENST00000477403 GPN3Q9UHW5 284 aaPredicted RBP6.14□□□□□ -1.43
RPL39-203ENST00000477403 KDM5BQ9UGL1 1544 aa6.14□□□□□ -1.43
RPL39-203ENST00000477403 TGFB1P01137 390 aa6.13□□□□□ -1.43
RPL39-203ENST00000477403 ADH5P11766 374 aa6.13□□□□□ -1.43
RPL39-203ENST00000477403 SSTR4P31391 388 aa6.13□□□□□ -1.43
RPL39-203ENST00000477403 AP3B2Q13367 1082 aa6.13□□□□□ -1.43
RPL39-203ENST00000477403 NFKBIBQ15653 356 aa6.13□□□□□ -1.43
RPL39-203ENST00000477403 RPS26P11Q5JNZ5 115 aaPredicted RBP6.13□□□□□ -1.43
RPL39-203ENST00000477403 CDPF1Q6NVV7 123 aa6.13□□□□□ -1.43
RPL39-203ENST00000477403 NXPE4Q6UWF7 544 aa6.13□□□□□ -1.43
RPL39-203ENST00000477403 C2CD4AQ8NCU7 369 aaPredicted RBP6.13□□□□□ -1.43
RPL39-203ENST00000477403 FBLIM1Q8WUP2 373 aa6.13□□□□□ -1.43
RPL39-203ENST00000477403 MFSD14AQ96MC6 490 aa6.13□□□□□ -1.43
RPL39-203ENST00000477403 ASB16Q96NS5 453 aa6.13□□□□□ -1.43
RPL39-203ENST00000477403 ZC3H12CQ9C0D7 883 aaKnown RBP6.13□□□□□ -1.43
RPL39-203ENST00000477403 AP4E1Q9UPM8 1137 aa6.13□□□□□ -1.43
RPL39-203ENST00000477403 AKAP2Q9Y2D5 859 aa6.13□□□□□ -1.43
RPL39-203ENST00000477403 TSPOAP1O95153 1857 aa6.13□□□□□ -1.43
RPL39-203ENST00000477403 CD109Q6YHK3 1445 aa6.12□□□□□ -1.43
RPL39-203ENST00000477403 DYMQ7RTS9 669 aa6.12□□□□□ -1.43
RPL39-203ENST00000477403 PHLDB1Q86UU1 1377 aa6.12□□□□□ -1.43
RPL39-203ENST00000477403 ZDHHC13Q8IUH4 622 aa6.12□□□□□ -1.43
RPL39-203ENST00000477403 AEBP1Q8IUX7 1158 aa6.12□□□□□ -1.43
RPL39-203ENST00000477403 SHKBP1Q8TBC3 707 aa6.12□□□□□ -1.43
RPL39-203ENST00000477403 SETDB2Q96T68 719 aa6.12□□□□□ -1.43
RPL39-203ENST00000477403 PCMTD2Q9NV79 361 aa6.12□□□□□ -1.43
RPL39-203ENST00000477403 ACTL7BQ9Y614 415 aa6.12□□□□□ -1.43
RPL39-203ENST00000477403 LMTK3Q96Q04 1460 aa6.11□□□□□ -1.43
RPL39-203ENST00000477403 FAM95CA0A1B0GW59 222 aa6.11□□□□□ -1.43
RPL39-203ENST00000477403 WDR64B1ANS9 1081 aa6.11□□□□□ -1.43
RPL39-203ENST00000477403 RAB6AP20340 208 aa6.11□□□□□ -1.43
RPL39-203ENST00000477403 FMR1Q06787 632 aaKnown RBP eCLIP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms