RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 PARP3Q9Y6F1 533 aa8.87□□□□□ -0.99
LRCH3-215ENST00000476664 ROBO2Q9HCK4 1378 aa8.86□□□□□ -0.99
LRCH3-215ENST00000476664 POLR3DP05423 398 aaPredicted RBP8.86□□□□□ -0.99
LRCH3-215ENST00000476664 POTEJP0CG39 1038 aa8.86□□□□□ -0.99
LRCH3-215ENST00000476664 PAX3P23760 479 aa8.86□□□□□ -0.99
LRCH3-215ENST00000476664 GTF2E1P29083 439 aaPredicted RBP8.86□□□□□ -0.99
LRCH3-215ENST00000476664 GIPRP48546 466 aa8.86□□□□□ -0.99
LRCH3-215ENST00000476664 EVA1CP58658 441 aa8.86□□□□□ -0.99
LRCH3-215ENST00000476664 IRX6P78412 446 aaPredicted RBP8.86□□□□□ -0.99
LRCH3-215ENST00000476664 MAP3K10Q02779 954 aa8.86□□□□□ -0.99
LRCH3-215ENST00000476664 LMNB2Q03252 620 aa8.86□□□□□ -0.99
LRCH3-215ENST00000476664 NFE2Q16621 373 aaPredicted RBP8.86□□□□□ -0.99
LRCH3-215ENST00000476664 IER5Q5VY09 327 aa8.86□□□□□ -0.99
LRCH3-215ENST00000476664 PRPF40BQ6NWY9 871 aaKnown RBP8.86□□□□□ -0.99
LRCH3-215ENST00000476664 ADGRD1Q6QNK2 874 aa8.86□□□□□ -0.99
LRCH3-215ENST00000476664 CCDC81Q6ZN84 652 aa8.86□□□□□ -0.99
LRCH3-215ENST00000476664 JAMLQ86YT9 394 aa8.86□□□□□ -0.99
LRCH3-215ENST00000476664 ZNF295-AS1Q8N0V1 137 aa8.86□□□□□ -0.99
LRCH3-215ENST00000476664 GOLM1Q8NBJ4 401 aa8.86□□□□□ -0.99
LRCH3-215ENST00000476664 WNT2BQ93097 391 aa8.86□□□□□ -0.99
LRCH3-215ENST00000476664 EVI5LQ96CN4 794 aa8.86□□□□□ -0.99
LRCH3-215ENST00000476664 WBP1LQ9NX94 342 aa8.86□□□□□ -0.99
LRCH3-215ENST00000476664 PTCH2Q9Y6C5 1203 aa8.86□□□□□ -0.99
LRCH3-215ENST00000476664 KDM2BQ8NHM5 1336 aa8.85□□□□□ -0.99
LRCH3-215ENST00000476664 PRXQ9BXM0 1461 aa8.85□□□□□ -0.99
LRCH3-215ENST00000476664 KCNQ2O43526 872 aa8.85□□□□□ -0.99
LRCH3-215ENST00000476664 TSPAN6O43657 245 aa8.85□□□□□ -0.99
LRCH3-215ENST00000476664 ALDH1L1O75891 902 aa8.85□□□□□ -0.99
LRCH3-215ENST00000476664 GARTP22102 1010 aa8.85□□□□□ -0.99
LRCH3-215ENST00000476664 BAG6P46379 1132 aa8.85□□□□□ -0.99
LRCH3-215ENST00000476664 ARSDP51689 593 aa8.85□□□□□ -0.99
LRCH3-215ENST00000476664 PRELPP51888 382 aa8.85□□□□□ -0.99
LRCH3-215ENST00000476664 CLN3Q13286 438 aa8.85□□□□□ -0.99
LRCH3-215ENST00000476664 PPP2R5AQ15172 486 aa8.85□□□□□ -0.99
LRCH3-215ENST00000476664 MAP3K11Q16584 847 aa8.85□□□□□ -0.99
LRCH3-215ENST00000476664 LONRF3Q496Y0 759 aa8.85□□□□□ -0.99
LRCH3-215ENST00000476664 CT47A1Q5JQC4 288 aaPredicted RBP8.85□□□□□ -0.99
LRCH3-215ENST00000476664 PPP1R26Q5T8A7 1209 aaPredicted RBP8.85□□□□□ -0.99
LRCH3-215ENST00000476664 KIAA0319Q5VV43 1072 aa8.85□□□□□ -0.99
LRCH3-215ENST00000476664 TEX2Q8IWB9 1127 aa8.85□□□□□ -0.99
LRCH3-215ENST00000476664 ZNF687Q8N1G0 1237 aa8.85□□□□□ -0.99
LRCH3-215ENST00000476664 RHPN1Q8TCX5 695 aa8.85□□□□□ -0.99
LRCH3-215ENST00000476664 TSR2Q969E8 191 aaKnown RBP8.85□□□□□ -0.99
LRCH3-215ENST00000476664 EHD4Q9H223 541 aa8.85□□□□□ -0.99
LRCH3-215ENST00000476664 PGPEP1Q9NXJ5 209 aa8.85□□□□□ -0.99
LRCH3-215ENST00000476664 PPT2Q9UMR5 302 aa8.85□□□□□ -0.99
LRCH3-215ENST00000476664 SPHKAPQ2M3C7 1700 aa8.85□□□□□ -0.99
LRCH3-215ENST00000476664 PNPLA6Q8IY17 1366 aa8.85□□□□□ -0.99
LRCH3-215ENST00000476664 NINLQ9Y2I6 1382 aa8.85□□□□□ -0.99
LRCH3-215ENST00000476664 PF4P02776 101 aa8.84□□□□□ -0.99
LRCH3-215ENST00000476664 SOX5P35711 763 aa8.84□□□□□ -0.99
LRCH3-215ENST00000476664 LIG3P49916 1009 aa8.84□□□□□ -0.99
LRCH3-215ENST00000476664 IDH3AP50213 366 aa8.84□□□□□ -0.99
LRCH3-215ENST00000476664 BRINP3Q76B58 766 aa8.84□□□□□ -0.99
LRCH3-215ENST00000476664 SAMD3Q8N6K7 520 aa8.84□□□□□ -0.99
LRCH3-215ENST00000476664 FAM169BQ8N8A8 192 aa8.84□□□□□ -0.99
LRCH3-215ENST00000476664 LRRC59Q96AG4 307 aaKnown RBP8.84□□□□□ -0.99
LRCH3-215ENST00000476664 MFSD3Q96ES6 412 aa8.84□□□□□ -0.99
LRCH3-215ENST00000476664 FERD3LQ96RJ6 166 aa8.84□□□□□ -0.99
LRCH3-215ENST00000476664 SLC26A8Q96RN1 970 aa8.84□□□□□ -0.99
LRCH3-215ENST00000476664 FHDC1Q9C0D6 1143 aaPredicted RBP8.84□□□□□ -0.99
LRCH3-215ENST00000476664 CAAP1Q9H8G2 361 aa8.84□□□□□ -0.99
LRCH3-215ENST00000476664 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.84□□□□□ -0.99
LRCH3-215ENST00000476664 CD2APQ9Y5K6 639 aa8.84□□□□□ -0.99
LRCH3-215ENST00000476664 SYCP2Q9BX26 1530 aa8.84□□□□□ -0.99
LRCH3-215ENST00000476664 WASHC2CQ9Y4E1 1318 aa8.83□□□□□ -1
LRCH3-215ENST00000476664 TROQ12816 1431 aaPredicted RBP8.83□□□□□ -1
LRCH3-215ENST00000476664 ADD1P35611 737 aaKnown RBP8.83□□□□□ -1
LRCH3-215ENST00000476664 STAT3P40763 770 aa8.83□□□□□ -1
LRCH3-215ENST00000476664 FCGRTP55899 365 aa8.83□□□□□ -1
LRCH3-215ENST00000476664 CENPCQ03188 943 aa8.83□□□□□ -1
LRCH3-215ENST00000476664 CAMK2GQ13555 558 aaPredicted RBP8.83□□□□□ -1
LRCH3-215ENST00000476664 BRD3Q15059 726 aa8.83□□□□□ -1
LRCH3-215ENST00000476664 TTF1Q15361 905 aaPredicted RBP8.83□□□□□ -1
LRCH3-215ENST00000476664 ZFYVE27Q5T4F4 411 aa8.83□□□□□ -1
LRCH3-215ENST00000476664 LARP1BQ659C4 914 aaKnown RBP8.83□□□□□ -1
LRCH3-215ENST00000476664 FAM196AQ6ZSG2 479 aa8.83□□□□□ -1
LRCH3-215ENST00000476664 GLIS3Q8NEA6 775 aa8.83□□□□□ -1
LRCH3-215ENST00000476664 ZSWIM2Q8NEG5 633 aa8.83□□□□□ -1
LRCH3-215ENST00000476664 SP7Q8TDD2 431 aaPredicted RBP8.83□□□□□ -1
LRCH3-215ENST00000476664 ZNF669Q96BR6 464 aaPredicted RBP8.83□□□□□ -1
LRCH3-215ENST00000476664 OXCT2Q9BYC2 517 aaPredicted RBP8.83□□□□□ -1
LRCH3-215ENST00000476664 MAF1Q9H063 256 aa8.83□□□□□ -1
LRCH3-215ENST00000476664 ZFYVE1Q9HBF4 777 aa8.83□□□□□ -1
LRCH3-215ENST00000476664 TMEM63CQ9P1W3 806 aa8.83□□□□□ -1
LRCH3-215ENST00000476664 GPC6Q9Y625 555 aaPredicted RBP8.83□□□□□ -1
LRCH3-215ENST00000476664 EREGO14944 169 aa8.82□□□□□ -1
LRCH3-215ENST00000476664 HRO43593 1189 aa8.82□□□□□ -1
LRCH3-215ENST00000476664 MYL1P05976 194 aa8.82□□□□□ -1
LRCH3-215ENST00000476664 GRM5P41594 1212 aa8.82□□□□□ -1
LRCH3-215ENST00000476664 HNRNPMP52272 730 aaKnown RBP eCLIP8.82□□□□□ -1
LRCH3-215ENST00000476664 SEZ6Q53EL9 994 aa8.82□□□□□ -1
LRCH3-215ENST00000476664 TM4SF20Q53R12 229 aa8.82□□□□□ -1
LRCH3-215ENST00000476664 DDX42Q86XP3 938 aaKnown RBP eCLIP8.82□□□□□ -1
LRCH3-215ENST00000476664 RAVER1Q8IY67 606 aaKnown RBP8.82□□□□□ -1
LRCH3-215ENST00000476664 CMTR1Q8N1G2 835 aaKnown RBP8.82□□□□□ -1
LRCH3-215ENST00000476664 ST13P5Q8NFI4 369 aaPredicted RBP8.82□□□□□ -1
LRCH3-215ENST00000476664 NINJ1Q92982 152 aa8.82□□□□□ -1
LRCH3-215ENST00000476664 CEP44Q9C0F1 390 aa8.82□□□□□ -1
LRCH3-215ENST00000476664 TLR6Q9Y2C9 796 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms