RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 SRGAP3O43295 1099 aa16.5■□□□□ 0.23
CPSF4-210ENST00000469897 BCAR3O75815 825 aa16.5■□□□□ 0.23
CPSF4-210ENST00000469897 GNAI3P08754 354 aa16.5■□□□□ 0.23
CPSF4-210ENST00000469897 NFIAQ12857 509 aa16.5■□□□□ 0.23
CPSF4-210ENST00000469897 ERO1BQ86YB8 467 aa16.5■□□□□ 0.23
CPSF4-210ENST00000469897 FRAT1Q92837 279 aaPredicted RBP16.5■□□□□ 0.23
CPSF4-210ENST00000469897 TNNQ9UQP3 1299 aa16.5■□□□□ 0.23
CPSF4-210ENST00000469897 A0A1B0GUL6 1792 aa16.5■□□□□ 0.23
CPSF4-210ENST00000469897 AKAP11Q9UKA4 1901 aa16.49■□□□□ 0.23
CPSF4-210ENST00000469897 IRF6O14896 467 aa16.49■□□□□ 0.23
CPSF4-210ENST00000469897 SEMA3EO15041 775 aa16.49■□□□□ 0.23
CPSF4-210ENST00000469897 IPO8O15397 1037 aaKnown RBP16.49■□□□□ 0.23
CPSF4-210ENST00000469897 CAP1Q01518 475 aa16.49■□□□□ 0.23
CPSF4-210ENST00000469897 TFCP2Q12800 502 aa16.49■□□□□ 0.23
CPSF4-210ENST00000469897 TAF1CQ15572 869 aaPredicted RBP16.49■□□□□ 0.23
CPSF4-210ENST00000469897 DCAF15Q66K64 600 aa16.49■□□□□ 0.23
CPSF4-210ENST00000469897 ZFPM1Q8IX07 1006 aa16.49■□□□□ 0.23
CPSF4-210ENST00000469897 ZNF341Q9BYN7 854 aa16.49■□□□□ 0.23
CPSF4-210ENST00000469897 EFCC1Q9HA90 598 aa16.49■□□□□ 0.23
CPSF4-210ENST00000469897 ZFYVE28Q9HCC9 887 aa16.49■□□□□ 0.23
CPSF4-210ENST00000469897 PTPN22Q9Y2R2 807 aa16.49■□□□□ 0.23
CPSF4-210ENST00000469897 INPP5BP32019 993 aa16.48■□□□□ 0.23
CPSF4-210ENST00000469897 CLUAP1Q96AJ1 413 aa16.48■□□□□ 0.23
CPSF4-210ENST00000469897 FAM198AQ9UFP1 575 aa16.48■□□□□ 0.23
CPSF4-210ENST00000469897 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.48■□□□□ 0.23
CPSF4-210ENST00000469897 SALL1Q9NSC2 1324 aa16.47■□□□□ 0.23
CPSF4-210ENST00000469897 A0A1B0GUL7 405 aa16.47■□□□□ 0.23
CPSF4-210ENST00000469897 CETPP11597 493 aa16.47■□□□□ 0.23
CPSF4-210ENST00000469897 TRIM27P14373 513 aa16.47■□□□□ 0.23
CPSF4-210ENST00000469897 SNAPC2Q13487 334 aa16.47■□□□□ 0.23
CPSF4-210ENST00000469897 XAGE2Q96GT9 111 aa16.47■□□□□ 0.23
CPSF4-210ENST00000469897 NEUROD6Q96NK8 337 aa16.47■□□□□ 0.23
CPSF4-210ENST00000469897 ABCF2Q9UG63 623 aa16.47■□□□□ 0.23
CPSF4-210ENST00000469897 BTBD19C9JJ37 291 aa16.46■□□□□ 0.23
CPSF4-210ENST00000469897 PPATQ06203 517 aa16.46■□□□□ 0.23
CPSF4-210ENST00000469897 MTX1Q13505 466 aa16.46■□□□□ 0.23
CPSF4-210ENST00000469897 RASGRF1Q13972 1273 aa16.46■□□□□ 0.23
CPSF4-210ENST00000469897 ZNF112Q9UJU3 913 aa16.46■□□□□ 0.23
CPSF4-210ENST00000469897 AKAP2Q9Y2D5 859 aa16.46■□□□□ 0.23
CPSF4-210ENST00000469897 GNAI2P04899 355 aa16.45■□□□□ 0.22
CPSF4-210ENST00000469897 PPIL2Q13356 520 aa16.45■□□□□ 0.22
CPSF4-210ENST00000469897 ATF7IPQ6VMQ6 1270 aa16.45■□□□□ 0.22
CPSF4-210ENST00000469897 ZGPATQ8N5A5 531 aaKnown RBP16.45■□□□□ 0.22
CPSF4-210ENST00000469897 WDHD1O75717 1129 aaPredicted RBP16.44■□□□□ 0.22
CPSF4-210ENST00000469897 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.44■□□□□ 0.22
CPSF4-210ENST00000469897 PNMA6EA0A0J9YXQ4 647 aa16.43■□□□□ 0.22
CPSF4-210ENST00000469897 POTEFA5A3E0 1075 aa16.43■□□□□ 0.22
CPSF4-210ENST00000469897 ZBTB22O15209 634 aa16.43■□□□□ 0.22
CPSF4-210ENST00000469897 TLR2O60603 784 aa16.43■□□□□ 0.22
CPSF4-210ENST00000469897 ECM2O94769 699 aaPredicted RBP16.43■□□□□ 0.22
CPSF4-210ENST00000469897 RGS3P49796 1198 aa16.43■□□□□ 0.22
CPSF4-210ENST00000469897 G3BP1Q13283 466 aaKnown RBP eCLIP16.43■□□□□ 0.22
CPSF4-210ENST00000469897 MVPQ14764 893 aaKnown RBP16.43■□□□□ 0.22
CPSF4-210ENST00000469897 ARHGEF6Q15052 776 aa16.43■□□□□ 0.22
CPSF4-210ENST00000469897 GORABQ5T7V8 394 aa16.43■□□□□ 0.22
CPSF4-210ENST00000469897 SPTY2D1Q68D10 685 aaPredicted RBP16.43■□□□□ 0.22
CPSF4-210ENST00000469897 DZIP1Q86YF9 867 aaKnown RBP16.43■□□□□ 0.22
CPSF4-210ENST00000469897 RPAP1Q9BWH6 1393 aaPredicted RBP16.42■□□□□ 0.22
CPSF4-210ENST00000469897 SLURP2P0DP57 97 aa16.42■□□□□ 0.22
CPSF4-210ENST00000469897 TBC1D9Q6ZT07 1266 aa16.42■□□□□ 0.22
CPSF4-210ENST00000469897 SH3BP5LQ7L8J4 393 aa16.42■□□□□ 0.22
CPSF4-210ENST00000469897 ZSCAN29Q8IWY8 852 aaPredicted RBP16.42■□□□□ 0.22
CPSF4-210ENST00000469897 SLF2Q8IX21 1173 aa16.42■□□□□ 0.22
CPSF4-210ENST00000469897 MIER1Q8N108 512 aa16.42■□□□□ 0.22
CPSF4-210ENST00000469897 TMEM57Q8N5G2 664 aa16.42■□□□□ 0.22
CPSF4-210ENST00000469897 FAM163AQ96GL9 167 aaPredicted RBP16.42■□□□□ 0.22
CPSF4-210ENST00000469897 IDI2Q9BXS1 227 aa16.42■□□□□ 0.22
CPSF4-210ENST00000469897 HMG20BQ9P0W2 317 aa16.42■□□□□ 0.22
CPSF4-210ENST00000469897 PDHXO00330 501 aa16.41■□□□□ 0.22
CPSF4-210ENST00000469897 ENTPD3O75355 529 aa16.41■□□□□ 0.22
CPSF4-210ENST00000469897 BTDP43251 543 aa16.41■□□□□ 0.22
CPSF4-210ENST00000469897 MECOMQ03112 1051 aa16.41■□□□□ 0.22
CPSF4-210ENST00000469897 PICALMQ13492 652 aa16.41■□□□□ 0.22
CPSF4-210ENST00000469897 ZKSCAN2Q63HK3 967 aa16.41■□□□□ 0.22
CPSF4-210ENST00000469897 ERICH6Q7L0X2 663 aa16.41■□□□□ 0.22
CPSF4-210ENST00000469897 ARHGAP39Q9C0H5 1083 aa16.41■□□□□ 0.22
CPSF4-210ENST00000469897 ZCCHC17Q9NP64 241 aaKnown RBP16.41■□□□□ 0.22
CPSF4-210ENST00000469897 CPA4Q9UI42 421 aa16.41■□□□□ 0.22
CPSF4-210ENST00000469897 GAKO14976 1311 aa16.41■□□□□ 0.22
CPSF4-210ENST00000469897 DDTLA6NHG4 134 aaPredicted RBP16.4■□□□□ 0.22
CPSF4-210ENST00000469897 PHF20L1A8MW92 1017 aa16.4■□□□□ 0.22
CPSF4-210ENST00000469897 NOL9Q5SY16 702 aaKnown RBP16.4■□□□□ 0.22
CPSF4-210ENST00000469897 C17orf99Q6UX52 265 aa16.4■□□□□ 0.22
CPSF4-210ENST00000469897 PI16Q6UXB8 463 aa16.4■□□□□ 0.22
CPSF4-210ENST00000469897 ANKRD23Q86SG2 305 aa16.4■□□□□ 0.22
CPSF4-210ENST00000469897 SPATA5Q8NB90 893 aa16.4■□□□□ 0.22
CPSF4-210ENST00000469897 ZNF384Q8TF68 577 aa16.4■□□□□ 0.22
CPSF4-210ENST00000469897 ARMC5Q96C12 935 aa16.4■□□□□ 0.22
CPSF4-210ENST00000469897 DDX4Q9NQI0 724 aaKnown RBP16.4■□□□□ 0.22
CPSF4-210ENST00000469897 KCNH4Q9UQ05 1017 aa16.4■□□□□ 0.22
CPSF4-210ENST00000469897 PTCH2Q9Y6C5 1203 aa16.4■□□□□ 0.22
CPSF4-210ENST00000469897 GPR75-ASB3A0A0A6YYF3 556 aa16.39■□□□□ 0.21
CPSF4-210ENST00000469897 EN2P19622 333 aaPredicted RBP16.39■□□□□ 0.21
CPSF4-210ENST00000469897 LACTBP83111 547 aaPredicted RBP16.39■□□□□ 0.21
CPSF4-210ENST00000469897 HNRNPUQ00839 825 aaKnown RBP eCLIP16.39■□□□□ 0.21
CPSF4-210ENST00000469897 MOGSQ13724 837 aa16.39■□□□□ 0.21
CPSF4-210ENST00000469897 KIF22Q14807 665 aa16.39■□□□□ 0.21
CPSF4-210ENST00000469897 ZHX2Q9Y6X8 837 aa16.39■□□□□ 0.21
CPSF4-210ENST00000469897 ECM29Q5VYK3 1845 aa16.39■□□□□ 0.21
CPSF4-210ENST00000469897 PDS5AQ29RF7 1337 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 154.1 ms