RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 TRIM42Q8IWZ5 723 aa6.72□□□□□ -1.33
SSR3-204ENST00000467733 COL26A1Q96A83 441 aa6.72□□□□□ -1.33
SSR3-204ENST00000467733 LACRTQ9GZZ8 138 aa6.72□□□□□ -1.33
SSR3-204ENST00000467733 ARHGEF5Q12774 1597 aa6.72□□□□□ -1.33
SSR3-204ENST00000467733 CDK12Q9NYV4 1490 aaPredicted RBP6.72□□□□□ -1.33
SSR3-204ENST00000467733 LRP6O75581 1613 aa6.72□□□□□ -1.33
SSR3-204ENST00000467733 EP400Q96L91 3159 aa6.71□□□□□ -1.33
SSR3-204ENST00000467733 TMEM94Q12767 1356 aa6.71□□□□□ -1.33
SSR3-204ENST00000467733 JCADQ9P266 1359 aa6.71□□□□□ -1.33
SSR3-204ENST00000467733 FSCN2O14926 492 aa6.71□□□□□ -1.34
SSR3-204ENST00000467733 KIF4AO95239 1232 aa6.71□□□□□ -1.34
SSR3-204ENST00000467733 SCNN1AP37088 669 aa6.71□□□□□ -1.34
SSR3-204ENST00000467733 TTC39BQ5VTQ0 682 aaPredicted RBP6.71□□□□□ -1.34
SSR3-204ENST00000467733 ANKRD34AQ69YU3 496 aa6.71□□□□□ -1.34
SSR3-204ENST00000467733 TXNDC11Q6PKC3 985 aa6.71□□□□□ -1.34
SSR3-204ENST00000467733 KIAA1211Q6ZU35 1233 aa6.71□□□□□ -1.34
SSR3-204ENST00000467733 CLEC10AQ8IUN9 316 aa6.71□□□□□ -1.34
SSR3-204ENST00000467733 KCNK4Q9NYG8 393 aa6.71□□□□□ -1.34
SSR3-204ENST00000467733 HIF3AQ9Y2N7 669 aa6.71□□□□□ -1.34
SSR3-204ENST00000467733 PIK3C2BO00750 1634 aa6.71□□□□□ -1.34
SSR3-204ENST00000467733 ACIN1Q9UKV3 1341 aaKnown RBP6.71□□□□□ -1.34
SSR3-204ENST00000467733 PRDM15P57071 1507 aaPredicted RBP6.71□□□□□ -1.34
SSR3-204ENST00000467733 HMX2A2RU54 273 aa6.7□□□□□ -1.34
SSR3-204ENST00000467733 SART1O43290 800 aaKnown RBP6.7□□□□□ -1.34
SSR3-204ENST00000467733 WNT11O96014 354 aa6.7□□□□□ -1.34
SSR3-204ENST00000467733 PTPRAP18433 802 aa6.7□□□□□ -1.34
SSR3-204ENST00000467733 RFX1P22670 979 aa6.7□□□□□ -1.34
SSR3-204ENST00000467733 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.7□□□□□ -1.34
SSR3-204ENST00000467733 FAM20CQ8IXL6 584 aa6.7□□□□□ -1.34
SSR3-204ENST00000467733 CARD10Q9BWT7 1032 aa6.7□□□□□ -1.34
SSR3-204ENST00000467733 NOVA2Q9UNW9 492 aaKnown RBP6.7□□□□□ -1.34
SSR3-204ENST00000467733 ZNF644Q9H582 1327 aaPredicted RBP6.7□□□□□ -1.34
SSR3-204ENST00000467733 MTUS2Q5JR59 1369 aa6.69□□□□□ -1.34
SSR3-204ENST00000467733 MAST1Q9Y2H9 1570 aa6.69□□□□□ -1.34
SSR3-204ENST00000467733 AHDC1Q5TGY3 1603 aaPredicted RBP6.69□□□□□ -1.34
SSR3-204ENST00000467733 FGD6Q6ZV73 1430 aa6.69□□□□□ -1.34
SSR3-204ENST00000467733 PRR19A6NJB7 356 aa6.69□□□□□ -1.34
SSR3-204ENST00000467733 TM4SF5O14894 197 aa6.69□□□□□ -1.34
SSR3-204ENST00000467733 COL13A1Q5TAT6 717 aaPredicted RBP6.69□□□□□ -1.34
SSR3-204ENST00000467733 WNT8BQ93098 351 aa6.69□□□□□ -1.34
SSR3-204ENST00000467733 FAM83CQ9BQN1 747 aa6.69□□□□□ -1.34
SSR3-204ENST00000467733 PBX4Q9BYU1 374 aa6.69□□□□□ -1.34
SSR3-204ENST00000467733 RASSF4Q9H2L5 321 aa6.69□□□□□ -1.34
SSR3-204ENST00000467733 SEC31BQ9NQW1 1179 aa6.69□□□□□ -1.34
SSR3-204ENST00000467733 ABI2Q9NYB9 513 aaPredicted RBP6.69□□□□□ -1.34
SSR3-204ENST00000467733 CEP162Q5TB80 1403 aa6.68□□□□□ -1.34
SSR3-204ENST00000467733 TET3O43151 1660 aa6.68□□□□□ -1.34
SSR3-204ENST00000467733 EPHA1P21709 976 aa6.68□□□□□ -1.34
SSR3-204ENST00000467733 LTKP29376 864 aa6.68□□□□□ -1.34
SSR3-204ENST00000467733 CABP4P57796 275 aa6.68□□□□□ -1.34
SSR3-204ENST00000467733 CFAP70Q5T0N1 1121 aa6.68□□□□□ -1.34
SSR3-204ENST00000467733 SHKBP1Q8TBC3 707 aa6.68□□□□□ -1.34
SSR3-204ENST00000467733 FOXD4L4Q8WXT5 416 aaPredicted RBP6.68□□□□□ -1.34
SSR3-204ENST00000467733 RNF208Q9H0X6 261 aa6.68□□□□□ -1.34
SSR3-204ENST00000467733 KCNF1Q9H3M0 494 aa6.68□□□□□ -1.34
SSR3-204ENST00000467733 CHD2O14647 1828 aaKnown RBP6.68□□□□□ -1.34
SSR3-204ENST00000467733 SPATA31A6Q5VVP1 1343 aa6.68□□□□□ -1.34
SSR3-204ENST00000467733 EFCAB6Q5THR3 1501 aa6.67□□□□□ -1.34
SSR3-204ENST00000467733 H3BRJ5 948 aa6.67□□□□□ -1.34
SSR3-204ENST00000467733 PRMT3O60678 531 aa6.67□□□□□ -1.34
SSR3-204ENST00000467733 ADAMTS4O75173 837 aa6.67□□□□□ -1.34
SSR3-204ENST00000467733 CDC25BP30305 580 aa6.67□□□□□ -1.34
SSR3-204ENST00000467733 ZAP70P43403 619 aa6.67□□□□□ -1.34
SSR3-204ENST00000467733 OCLNQ16625 522 aa6.67□□□□□ -1.34
SSR3-204ENST00000467733 ZNF772Q68DY9 489 aaPredicted RBP6.67□□□□□ -1.34
SSR3-204ENST00000467733 BEND4Q6ZU67 534 aa6.67□□□□□ -1.34
SSR3-204ENST00000467733 NCAPG2Q86XI2 1143 aa6.67□□□□□ -1.34
SSR3-204ENST00000467733 GIMAP7Q8NHV1 300 aa6.67□□□□□ -1.34
SSR3-204ENST00000467733 UBASH3BQ8TF42 649 aa6.67□□□□□ -1.34
SSR3-204ENST00000467733 PRIMPOLQ96LW4 560 aa6.67□□□□□ -1.34
SSR3-204ENST00000467733 ADAM19Q9H013 955 aa6.67□□□□□ -1.34
SSR3-204ENST00000467733 SAP130Q9H0E3 1048 aa6.67□□□□□ -1.34
SSR3-204ENST00000467733 OSGEPQ9NPF4 335 aa6.67□□□□□ -1.34
SSR3-204ENST00000467733 MSH6P52701 1360 aa6.67□□□□□ -1.34
SSR3-204ENST00000467733 ARHGAP31Q2M1Z3 1444 aa6.67□□□□□ -1.34
SSR3-204ENST00000467733 DIP2AQ14689 1571 aa6.66□□□□□ -1.34
SSR3-204ENST00000467733 TNFRSF10BO14763 440 aa6.66□□□□□ -1.34
SSR3-204ENST00000467733 ADAM11O75078 769 aa6.66□□□□□ -1.34
SSR3-204ENST00000467733 BMP3P12645 472 aa6.66□□□□□ -1.34
SSR3-204ENST00000467733 FDX2Q6P4F2 183 aa6.66□□□□□ -1.34
SSR3-204ENST00000467733 TXNDC2Q86VQ3 553 aa6.66□□□□□ -1.34
SSR3-204ENST00000467733 ABTB2Q8N961 1025 aa6.66□□□□□ -1.34
SSR3-204ENST00000467733 TMEM2Q9UHN6 1383 aa6.66□□□□□ -1.34
SSR3-204ENST00000467733 ADGRB3O60242 1522 aa6.66□□□□□ -1.34
SSR3-204ENST00000467733 KCNA6P17658 529 aa6.65□□□□□ -1.34
SSR3-204ENST00000467733 ELOAQ14241 798 aaKnown RBP6.65□□□□□ -1.34
SSR3-204ENST00000467733 CPSF6Q16630 551 aaKnown RBP eCLIP6.65□□□□□ -1.34
SSR3-204ENST00000467733 PDE12Q6L8Q7 609 aaKnown RBP6.65□□□□□ -1.34
SSR3-204ENST00000467733 CEP120Q8N960 986 aa6.65□□□□□ -1.34
SSR3-204ENST00000467733 SH2B1Q9NRF2 756 aaPredicted RBP6.65□□□□□ -1.34
SSR3-204ENST00000467733 EID1Q9Y6B2 187 aa6.65□□□□□ -1.34
SSR3-204ENST00000467733 RGS12O14924 1447 aa6.65□□□□□ -1.35
SSR3-204ENST00000467733 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.64□□□□□ -1.35
SSR3-204ENST00000467733 MYO5BQ9ULV0 1848 aa6.64□□□□□ -1.35
SSR3-204ENST00000467733 DDX3YO15523 660 aaKnown RBP6.64□□□□□ -1.35
SSR3-204ENST00000467733 GAS2O43903 313 aaKnown RBP6.64□□□□□ -1.35
SSR3-204ENST00000467733 PREPP48147 710 aa6.64□□□□□ -1.35
SSR3-204ENST00000467733 FAM26DQ5JW98 314 aa6.64□□□□□ -1.35
SSR3-204ENST00000467733 MEX3CQ5U5Q3 659 aaKnown RBP6.64□□□□□ -1.35
SSR3-204ENST00000467733 GPR152Q8TDT2 470 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms