RNA–Protein interactions for RNA: ENST00000462256.5

DDX39B-215, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 4,027 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-215ENST00000462256 HMG20BQ9P0W2 317 aa10.91□□□□□ -0.66
DDX39B-215ENST00000462256 RIPOR2Q9Y4F9 1068 aa10.91□□□□□ -0.66
DDX39B-215ENST00000462256 COL22A1Q8NFW1 1626 aaPredicted RBP10.91□□□□□ -0.66
DDX39B-215ENST00000462256 IBTKQ9P2D0 1353 aaPredicted RBP10.9□□□□□ -0.66
DDX39B-215ENST00000462256 PRDX5P30044 214 aa10.9□□□□□ -0.66
DDX39B-215ENST00000462256 ZRSR1Q15695 479 aaKnown RBP10.9□□□□□ -0.66
DDX39B-215ENST00000462256 KBTBD3Q8NAB2 608 aa10.9□□□□□ -0.66
DDX39B-215ENST00000462256 B4DLN1 442 aa10.9□□□□□ -0.66
DDX39B-215ENST00000462256 KDM4AO75164 1064 aa10.9□□□□□ -0.66
DDX39B-215ENST00000462256 PDE6AP16499 860 aa10.9□□□□□ -0.66
DDX39B-215ENST00000462256 MRPL12P52815 198 aaKnown RBP10.9□□□□□ -0.66
DDX39B-215ENST00000462256 CRY2Q49AN0 593 aa10.9□□□□□ -0.66
DDX39B-215ENST00000462256 BLOC1S2Q6QNY1 142 aa10.9□□□□□ -0.66
DDX39B-215ENST00000462256 GOLGA6L4A6NEF3 574 aa10.9□□□□□ -0.67
DDX39B-215ENST00000462256 H3BQV1 296 aa10.9□□□□□ -0.67
DDX39B-215ENST00000462256 RABL6Q3YEC7 729 aaPredicted RBP10.9□□□□□ -0.67
DDX39B-215ENST00000462256 CERKLQ49MI3 558 aaPredicted RBP10.9□□□□□ -0.67
DDX39B-215ENST00000462256 IFFO2Q5TF58 517 aa10.9□□□□□ -0.67
DDX39B-215ENST00000462256 CATIPQ7Z7H3 387 aa10.9□□□□□ -0.67
DDX39B-215ENST00000462256 PAGR1Q9BTK6 254 aa10.9□□□□□ -0.67
DDX39B-215ENST00000462256 PI4KBQ9UBF8 816 aa10.9□□□□□ -0.67
DDX39B-215ENST00000462256 PARP4Q9UKK3 1724 aaKnown RBP10.89□□□□□ -0.67
DDX39B-215ENST00000462256 DEFB129Q9H1M3 183 aa10.89□□□□□ -0.67
DDX39B-215ENST00000462256 PRAMEF18Q5VWM3 479 aa10.89□□□□□ -0.67
DDX39B-215ENST00000462256 VAT1LQ9HCJ6 419 aa10.89□□□□□ -0.67
DDX39B-215ENST00000462256 GPRC5DQ9NZD1 345 aa10.89□□□□□ -0.67
DDX39B-215ENST00000462256 CLSTN1O94985 981 aa10.89□□□□□ -0.67
DDX39B-215ENST00000462256 YBX3P16989 372 aaKnown RBP eCLIP10.89□□□□□ -0.671e-8■□□□□ 8.9
DDX39B-215ENST00000462256 CUL5Q93034 780 aa10.89□□□□□ -0.67
DDX39B-215ENST00000462256 GLIS2Q9BZE0 524 aaPredicted RBP10.89□□□□□ -0.67
DDX39B-215ENST00000462256 KRT23Q9C075 422 aa10.89□□□□□ -0.67
DDX39B-215ENST00000462256 DBNLQ9UJU6 430 aaKnown RBP10.89□□□□□ -0.67
DDX39B-215ENST00000462256 PLCH1Q4KWH8 1693 aa10.89□□□□□ -0.67
DDX39B-215ENST00000462256 GPAA1O43292 621 aa10.88□□□□□ -0.67
DDX39B-215ENST00000462256 DEFB115Q30KQ5 88 aa10.88□□□□□ -0.67
DDX39B-215ENST00000462256 DDX11Q96FC9 970 aa10.88□□□□□ -0.67
DDX39B-215ENST00000462256 MXD3Q9BW11 206 aa10.88□□□□□ -0.67
DDX39B-215ENST00000462256 CNNM2Q9H8M5 875 aa10.88□□□□□ -0.67
DDX39B-215ENST00000462256 USP17L12C9JPN9 530 aa10.88□□□□□ -0.67
DDX39B-215ENST00000462256 USP17L21D6R901 530 aa10.88□□□□□ -0.67
DDX39B-215ENST00000462256 MECOMQ03112 1051 aa10.88□□□□□ -0.67
DDX39B-215ENST00000462256 FOXP4Q8IVH2 680 aaPredicted RBP10.88□□□□□ -0.67
DDX39B-215ENST00000462256 OTUD5Q96G74 571 aa10.88□□□□□ -0.67
DDX39B-215ENST00000462256 SLC5A4Q9NY91 659 aa10.88□□□□□ -0.67
DDX39B-215ENST00000462256 CYP46A1Q9Y6A2 500 aa10.88□□□□□ -0.67
DDX39B-215ENST00000462256 OSBPP22059 807 aa10.88□□□□□ -0.67
DDX39B-215ENST00000462256 KIF5BP33176 963 aa10.88□□□□□ -0.67
DDX39B-215ENST00000462256 ZNF76P36508 570 aa10.88□□□□□ -0.67
DDX39B-215ENST00000462256 CCDC102AQ96A19 550 aa10.88□□□□□ -0.67
DDX39B-215ENST00000462256 PRDM10Q9NQV6 1147 aa10.88□□□□□ -0.67
DDX39B-215ENST00000462256 SERPINB13Q9UIV8 391 aa10.88□□□□□ -0.67
DDX39B-215ENST00000462256 CCNA1P78396 465 aa10.87□□□□□ -0.67
DDX39B-215ENST00000462256 MTX1Q13505 466 aa10.87□□□□□ -0.67
DDX39B-215ENST00000462256 MCTP1Q6DN14 999 aa10.87□□□□□ -0.67
DDX39B-215ENST00000462256 PI16Q6UXB8 463 aa10.87□□□□□ -0.67
DDX39B-215ENST00000462256 PNMA3Q9UL41 463 aa10.87□□□□□ -0.67
DDX39B-215ENST00000462256 MED23Q9ULK4 1368 aa10.87□□□□□ -0.67
DDX39B-215ENST00000462256 XIRP1Q702N8 1843 aaKnown RBP10.87□□□□□ -0.67
DDX39B-215ENST00000462256 TRIM75PA6NK02 468 aa10.87□□□□□ -0.67
DDX39B-215ENST00000462256 FMNL1O95466 1100 aaPredicted RBP10.87□□□□□ -0.67
DDX39B-215ENST00000462256 ABCB5Q2M3G0 1257 aa10.87□□□□□ -0.67
DDX39B-215ENST00000462256 TAF1DQ9H5J8 278 aaPredicted RBP10.87□□□□□ -0.67
DDX39B-215ENST00000462256 CCDC196A0A1B0GTZ2 297 aa10.87□□□□□ -0.67
DDX39B-215ENST00000462256 UBE2Q2LH0YL09 131 aa10.87□□□□□ -0.67
DDX39B-215ENST00000462256 ASNSP08243 561 aa10.87□□□□□ -0.67
DDX39B-215ENST00000462256 CCDC17Q96LX7 622 aa10.87□□□□□ -0.67
DDX39B-215ENST00000462256 SREBF2Q12772 1141 aa10.87□□□□□ -0.67
DDX39B-215ENST00000462256 TMEM67Q5HYA8 995 aa10.87□□□□□ -0.67
DDX39B-215ENST00000462256 SERPINA10Q9UK55 444 aa10.87□□□□□ -0.67
DDX39B-215ENST00000462256 MRC1P22897 1456 aa10.87□□□□□ -0.67
DDX39B-215ENST00000462256 ZC3H4Q9UPT8 1303 aaKnown RBP10.86□□□□□ -0.67
DDX39B-215ENST00000462256 NFKBIEO00221 500 aa10.86□□□□□ -0.67
DDX39B-215ENST00000462256 TDRD7Q8NHU6 1098 aaKnown RBP10.86□□□□□ -0.67
DDX39B-215ENST00000462256 NCOA7Q8NI08 942 aa10.86□□□□□ -0.67
DDX39B-215ENST00000462256 EDC3Q96F86 508 aaKnown RBP10.86□□□□□ -0.67
DDX39B-215ENST00000462256 ATP8A2Q9NTI2 1148 aa10.86□□□□□ -0.67
DDX39B-215ENST00000462256 ARPP21Q9UBL0 812 aaPredicted RBP10.86□□□□□ -0.67
DDX39B-215ENST00000462256 ZNF70Q9UC06 446 aaPredicted RBP10.86□□□□□ -0.67
DDX39B-215ENST00000462256 ZHX2Q9Y6X8 837 aa10.86□□□□□ -0.67
DDX39B-215ENST00000462256 ZBED4O75132 1171 aa10.86□□□□□ -0.67
DDX39B-215ENST00000462256 PRDM1O75626 825 aa10.86□□□□□ -0.67
DDX39B-215ENST00000462256 NUCB1Q02818 461 aa10.86□□□□□ -0.67
DDX39B-215ENST00000462256 ANKRD13AQ8IZ07 590 aa10.86□□□□□ -0.67
DDX39B-215ENST00000462256 JAKMIP1Q96N16 626 aaKnown RBP10.86□□□□□ -0.67
DDX39B-215ENST00000462256 GOPCQ9HD26 462 aa10.86□□□□□ -0.67
DDX39B-215ENST00000462256 SLC12A7Q9Y666 1083 aa10.86□□□□□ -0.67
DDX39B-215ENST00000462256 FAM208AQ9UK61 1670 aaKnown RBP10.86□□□□□ -0.67
DDX39B-215ENST00000462256 HELLSQ9NRZ9 838 aa10.86□□□□□ -0.67
DDX39B-215ENST00000462256 SCAF8Q9UPN6 1271 aaKnown RBP10.86□□□□□ -0.67
DDX39B-215ENST00000462256 HOXD10P28358 340 aa10.85□□□□□ -0.67
DDX39B-215ENST00000462256 USP14P54578 494 aa10.85□□□□□ -0.67
DDX39B-215ENST00000462256 NMIQ13287 307 aaPredicted RBP10.85□□□□□ -0.67
DDX39B-215ENST00000462256 TAF1CQ15572 869 aaPredicted RBP10.85□□□□□ -0.67
DDX39B-215ENST00000462256 IFIT1BQ5T764 474 aaKnown RBP10.85□□□□□ -0.67
DDX39B-215ENST00000462256 CPXCR1Q8N123 301 aa10.85□□□□□ -0.67
DDX39B-215ENST00000462256 ZC3H15Q8WU90 426 aaKnown RBP10.85□□□□□ -0.67
DDX39B-215ENST00000462256 ELP3Q9H9T3 547 aa10.85□□□□□ -0.67
DDX39B-215ENST00000462256 PALD1Q9ULE6 856 aa10.85□□□□□ -0.67
DDX39B-215ENST00000462256 TMEM88BA6NKF7 163 aa10.85□□□□□ -0.67
DDX39B-215ENST00000462256 RRP9O43818 475 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms