RNA–Protein interactions for RNA: ENST00000448874.5

PTMA-208, Transcript of prothymosin alpha, humanhuman

TSL 2

Gene PTMA, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-208ENST00000448874 DCAF15Q66K64 600 aa20.68■□□□□ 0.9
PTMA-208ENST00000448874 ZKSCAN4Q969J2 545 aaPredicted RBP20.68■□□□□ 0.9
PTMA-208ENST00000448874 DENND2AQ9ULE3 1009 aa20.68■□□□□ 0.9
PTMA-208ENST00000448874 AK9Q5TCS8 1911 aa20.67■□□□□ 0.9
PTMA-208ENST00000448874 SEMA3EO15041 775 aa20.67■□□□□ 0.9
PTMA-208ENST00000448874 GNAI3P08754 354 aa20.67■□□□□ 0.9
PTMA-208ENST00000448874 SP3Q02447 781 aa20.67■□□□□ 0.9
PTMA-208ENST00000448874 TAF1CQ15572 869 aaPredicted RBP20.67■□□□□ 0.9
PTMA-208ENST00000448874 CDC42EP5Q6NZY7 148 aa20.67■□□□□ 0.9
PTMA-208ENST00000448874 FAM151AQ8WW52 585 aa20.67■□□□□ 0.9
PTMA-208ENST00000448874 SALL1Q9NSC2 1324 aa20.67■□□□□ 0.9
PTMA-208ENST00000448874 SRGAP3O43295 1099 aa20.66■□□□□ 0.9
PTMA-208ENST00000448874 TCP10Q12799 353 aa20.66■□□□□ 0.9
PTMA-208ENST00000448874 NFIAQ12857 509 aa20.66■□□□□ 0.9
PTMA-208ENST00000448874 CCDC102BQ68D86 513 aa20.66■□□□□ 0.9
PTMA-208ENST00000448874 MIGA2Q7L4E1 593 aa20.66■□□□□ 0.9
PTMA-208ENST00000448874 ERO1BQ86YB8 467 aa20.66■□□□□ 0.9
PTMA-208ENST00000448874 FAM43AQ8N2R8 423 aa20.66■□□□□ 0.9
PTMA-208ENST00000448874 ZNF341Q9BYN7 854 aa20.66■□□□□ 0.9
PTMA-208ENST00000448874 MYH2Q9UKX2 1941 aa20.66■□□□□ 0.9
PTMA-208ENST00000448874 TNRC18O15417 2968 aaPredicted RBP20.65■□□□□ 0.9
PTMA-208ENST00000448874 EFCC1Q9HA90 598 aa20.65■□□□□ 0.9
PTMA-208ENST00000448874 ZFYVE28Q9HCC9 887 aa20.65■□□□□ 0.9
PTMA-208ENST00000448874 IRF6O14896 467 aa20.64■□□□□ 0.89
PTMA-208ENST00000448874 TRIM27P14373 513 aa20.64■□□□□ 0.89
PTMA-208ENST00000448874 CAP1Q01518 475 aa20.64■□□□□ 0.89
PTMA-208ENST00000448874 MTX1Q13505 466 aa20.64■□□□□ 0.89
PTMA-208ENST00000448874 USP40Q9NVE5 1235 aa20.64■□□□□ 0.89
PTMA-208ENST00000448874 TNNQ9UQP3 1299 aa20.64■□□□□ 0.89
PTMA-208ENST00000448874 PTPN22Q9Y2R2 807 aa20.64■□□□□ 0.89
PTMA-208ENST00000448874 A0A1B0GUL7 405 aa20.63■□□□□ 0.89
PTMA-208ENST00000448874 ZBTB22O15209 634 aa20.63■□□□□ 0.89
PTMA-208ENST00000448874 IPO8O15397 1037 aaKnown RBP20.63■□□□□ 0.89
PTMA-208ENST00000448874 CETPP11597 493 aa20.63■□□□□ 0.89
PTMA-208ENST00000448874 INPP5BP32019 993 aa20.63■□□□□ 0.89
PTMA-208ENST00000448874 TIMM10P62072 90 aa20.63■□□□□ 0.89
PTMA-208ENST00000448874 TFCP2Q12800 502 aa20.63■□□□□ 0.89
PTMA-208ENST00000448874 PPIL2Q13356 520 aa20.63■□□□□ 0.89
PTMA-208ENST00000448874 SNAPC2Q13487 334 aa20.63■□□□□ 0.89
PTMA-208ENST00000448874 RASGRF1Q13972 1273 aa20.63■□□□□ 0.89
PTMA-208ENST00000448874 ZGPATQ8N5A5 531 aaKnown RBP20.63■□□□□ 0.89
PTMA-208ENST00000448874 FRAT1Q92837 279 aaPredicted RBP20.63■□□□□ 0.89
PTMA-208ENST00000448874 FAM198AQ9UFP1 575 aa20.63■□□□□ 0.89
PTMA-208ENST00000448874 DOCK2Q92608 1830 aa20.62■□□□□ 0.89
PTMA-208ENST00000448874 BCAR3O75815 825 aa20.62■□□□□ 0.89
PTMA-208ENST00000448874 ATF7IPQ6VMQ6 1270 aa20.62■□□□□ 0.89
PTMA-208ENST00000448874 XAGE2Q96GT9 111 aa20.62■□□□□ 0.89
PTMA-208ENST00000448874 BTBD19C9JJ37 291 aa20.61■□□□□ 0.89
PTMA-208ENST00000448874 DZIP1Q86YF9 867 aaKnown RBP20.61■□□□□ 0.89
PTMA-208ENST00000448874 ABCF2Q9UG63 623 aa20.61■□□□□ 0.89
PTMA-208ENST00000448874 AKAP2Q9Y2D5 859 aa20.61■□□□□ 0.89
PTMA-208ENST00000448874 GAKO14976 1311 aa20.6■□□□□ 0.89
PTMA-208ENST00000448874 PDS5AQ29RF7 1337 aaKnown RBP20.6■□□□□ 0.89
PTMA-208ENST00000448874 WDHD1O75717 1129 aaPredicted RBP20.6■□□□□ 0.89
PTMA-208ENST00000448874 PPATQ06203 517 aa20.6■□□□□ 0.89
PTMA-208ENST00000448874 ZFPM1Q8IX07 1006 aa20.6■□□□□ 0.89
PTMA-208ENST00000448874 CLUAP1Q96AJ1 413 aa20.6■□□□□ 0.89
PTMA-208ENST00000448874 ZCCHC17Q9NP64 241 aaKnown RBP20.6■□□□□ 0.89
PTMA-208ENST00000448874 ZNF112Q9UJU3 913 aa20.6■□□□□ 0.89
PTMA-208ENST00000448874 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.6■□□□□ 0.89
PTMA-208ENST00000448874 ZSWIM8A7E2V4 1837 aa20.6■□□□□ 0.89
PTMA-208ENST00000448874 RFX7Q2KHR2 1363 aa20.59■□□□□ 0.89
PTMA-208ENST00000448874 HTTP42858 3142 aa20.59■□□□□ 0.89
PTMA-208ENST00000448874 GNAI2P04899 355 aa20.59■□□□□ 0.89
PTMA-208ENST00000448874 MVPQ14764 893 aaKnown RBP20.59■□□□□ 0.89
PTMA-208ENST00000448874 RBBP6Q7Z6E9 1792 aaKnown RBP20.59■□□□□ 0.89
PTMA-208ENST00000448874 TLR2O60603 784 aa20.58■□□□□ 0.89
PTMA-208ENST00000448874 RGS3P49796 1198 aa20.58■□□□□ 0.89
PTMA-208ENST00000448874 NOL9Q5SY16 702 aaKnown RBP20.58■□□□□ 0.89
PTMA-208ENST00000448874 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.58■□□□□ 0.89
PTMA-208ENST00000448874 NEUROD6Q96NK8 337 aa20.58■□□□□ 0.89
PTMA-208ENST00000448874 ATRNL1Q5VV63 1379 aa20.58■□□□□ 0.88
PTMA-208ENST00000448874 PNMA6EA0A0J9YXQ4 647 aa20.57■□□□□ 0.88
PTMA-208ENST00000448874 POTEFA5A3E0 1075 aa20.57■□□□□ 0.88
PTMA-208ENST00000448874 SLC34A2O95436 690 aa20.57■□□□□ 0.88
PTMA-208ENST00000448874 ARHGEF6Q15052 776 aa20.57■□□□□ 0.88
PTMA-208ENST00000448874 SPTY2D1Q68D10 685 aaPredicted RBP20.57■□□□□ 0.88
PTMA-208ENST00000448874 SLF2Q8IX21 1173 aa20.57■□□□□ 0.88
PTMA-208ENST00000448874 ARMC5Q96C12 935 aa20.57■□□□□ 0.88
PTMA-208ENST00000448874 IDI2Q9BXS1 227 aa20.57■□□□□ 0.88
PTMA-208ENST00000448874 KCNH4Q9UQ05 1017 aa20.57■□□□□ 0.88
PTMA-208ENST00000448874 MROH7-TTC4A0A0A0MT08 1334 aa20.56■□□□□ 0.88
PTMA-208ENST00000448874 ENTPD3O75355 529 aa20.56■□□□□ 0.88
PTMA-208ENST00000448874 BTDP43251 543 aa20.56■□□□□ 0.88
PTMA-208ENST00000448874 PRPF38BQ5VTL8 546 aaKnown RBP20.56■□□□□ 0.88
PTMA-208ENST00000448874 TMEM57Q8N5G2 664 aa20.56■□□□□ 0.88
PTMA-208ENST00000448874 KIAA0100Q14667 2235 aaKnown RBP20.55■□□□□ 0.88
PTMA-208ENST00000448874 ZKSCAN2Q63HK3 967 aa20.55■□□□□ 0.88
PTMA-208ENST00000448874 ERICH6Q7L0X2 663 aa20.55■□□□□ 0.88
PTMA-208ENST00000448874 SH3BP5LQ7L8J4 393 aa20.55■□□□□ 0.88
PTMA-208ENST00000448874 ZSCAN29Q8IWY8 852 aaPredicted RBP20.55■□□□□ 0.88
PTMA-208ENST00000448874 FAM163AQ96GL9 167 aaPredicted RBP20.55■□□□□ 0.88
PTMA-208ENST00000448874 HMG20BQ9P0W2 317 aa20.55■□□□□ 0.88
PTMA-208ENST00000448874 PTCH2Q9Y6C5 1203 aa20.55■□□□□ 0.88
PTMA-208ENST00000448874 LACTBP83111 547 aaPredicted RBP20.54■□□□□ 0.88
PTMA-208ENST00000448874 MECOMQ03112 1051 aa20.54■□□□□ 0.88
PTMA-208ENST00000448874 G3BP1Q13283 466 aaKnown RBP eCLIP20.54■□□□□ 0.882e-7■□□□□ 8.6
PTMA-208ENST00000448874 PICALMQ13492 652 aa20.54■□□□□ 0.88
PTMA-208ENST00000448874 GORABQ5T7V8 394 aa20.54■□□□□ 0.88
PTMA-208ENST00000448874 PI16Q6UXB8 463 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms