RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 ANO10Q9NW15 660 aa9.95□□□□□ -0.82
HPS4-206ENST00000439453 A0A0G2JLW4 131 aa9.95□□□□□ -0.82
HPS4-206ENST00000439453 TGFB2P61812 414 aa9.95□□□□□ -0.82
HPS4-206ENST00000439453 E4F1Q66K89 784 aaPredicted RBP9.95□□□□□ -0.82
HPS4-206ENST00000439453 SYT10Q6XYQ8 523 aa9.95□□□□□ -0.82
HPS4-206ENST00000439453 DDX11Q96FC9 970 aa9.95□□□□□ -0.82
HPS4-206ENST00000439453 PPP1R13BQ96KQ4 1090 aa9.95□□□□□ -0.82
HPS4-206ENST00000439453 OSBPL5Q9H0X9 879 aaPredicted RBP9.95□□□□□ -0.82
HPS4-206ENST00000439453 ZNF646O15015 1829 aaPredicted RBP9.95□□□□□ -0.82
HPS4-206ENST00000439453 A0A087WWV3 80 aa9.95□□□□□ -0.82
HPS4-206ENST00000439453 H3BQV1 296 aa9.95□□□□□ -0.82
HPS4-206ENST00000439453 HIP1O00291 1037 aa9.95□□□□□ -0.82
HPS4-206ENST00000439453 CEBPZQ03701 1054 aaKnown RBP9.95□□□□□ -0.82
HPS4-206ENST00000439453 IFFO2Q5TF58 517 aa9.95□□□□□ -0.82
HPS4-206ENST00000439453 SLC51AQ86UW1 340 aa9.95□□□□□ -0.82
HPS4-206ENST00000439453 TRERF1Q96PN7 1200 aa9.95□□□□□ -0.82
HPS4-206ENST00000439453 TSPYL1Q9H0U9 437 aa9.95□□□□□ -0.82
HPS4-206ENST00000439453 ZSCAN16Q9H4T2 348 aaPredicted RBP9.95□□□□□ -0.82
HPS4-206ENST00000439453 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.95□□□□□ -0.82
HPS4-206ENST00000439453 TAF6LQ9Y6J9 622 aa9.95□□□□□ -0.82
HPS4-206ENST00000439453 TRIM28Q13263 835 aaKnown RBP9.94□□□□□ -0.82
HPS4-206ENST00000439453 ERFEQ4G0M1 354 aa9.94□□□□□ -0.82
HPS4-206ENST00000439453 ARHGAP29Q52LW3 1261 aa9.94□□□□□ -0.82
HPS4-206ENST00000439453 AOPEPQ8N6M6 819 aa9.94□□□□□ -0.82
HPS4-206ENST00000439453 NBPF11Q86T75 865 aa9.94□□□□□ -0.82
HPS4-206ENST00000439453 CEP57L1Q8IYX8 460 aa9.94□□□□□ -0.82
HPS4-206ENST00000439453 GOLPH3LQ9H4A5 285 aa9.94□□□□□ -0.82
HPS4-206ENST00000439453 IMPACTQ9P2X3 320 aa9.94□□□□□ -0.82
HPS4-206ENST00000439453 CRY2Q49AN0 593 aa9.94□□□□□ -0.82
HPS4-206ENST00000439453 BEND3Q5T5X7 828 aa9.94□□□□□ -0.82
HPS4-206ENST00000439453 CCDC73Q6ZRK6 1079 aa9.94□□□□□ -0.82
HPS4-206ENST00000439453 CNBD1Q8NA66 436 aa9.94□□□□□ -0.82
HPS4-206ENST00000439453 METTL22Q9BUU2 404 aaPredicted RBP9.94□□□□□ -0.82
HPS4-206ENST00000439453 SNRKQ9NRH2 765 aa9.94□□□□□ -0.82
HPS4-206ENST00000439453 MAP3K2Q9Y2U5 619 aa9.94□□□□□ -0.82
HPS4-206ENST00000439453 PI4KAP2A4QPH2 592 aa9.93□□□□□ -0.82
HPS4-206ENST00000439453 MAPK8IP2Q13387 824 aaPredicted RBP9.93□□□□□ -0.82
HPS4-206ENST00000439453 TEX35Q5T0J7 233 aa9.93□□□□□ -0.82
HPS4-206ENST00000439453 KSR2Q6VAB6 950 aa9.93□□□□□ -0.82
HPS4-206ENST00000439453 PI4KAP1Q8N8J0 262 aa9.93□□□□□ -0.82
HPS4-206ENST00000439453 BRIP1Q9BX63 1249 aa9.93□□□□□ -0.82
HPS4-206ENST00000439453 DUOX1Q9NRD9 1551 aa9.93□□□□□ -0.82
HPS4-206ENST00000439453 ATP5J2-PTCD1G3V325 749 aa9.93□□□□□ -0.82
HPS4-206ENST00000439453 KINO60870 393 aaKnown RBP9.93□□□□□ -0.82
HPS4-206ENST00000439453 ZRANB2O95218 330 aaKnown RBP eCLIP9.93□□□□□ -0.82
HPS4-206ENST00000439453 AACSQ86V21 672 aa9.93□□□□□ -0.82
HPS4-206ENST00000439453 DNAAF4Q8WXU2 420 aa9.93□□□□□ -0.82
HPS4-206ENST00000439453 RCOR1Q9UKL0 485 aa9.93□□□□□ -0.82
HPS4-206ENST00000439453 A0A0D9SFI3 127 aa9.93□□□□□ -0.82
HPS4-206ENST00000439453 ADD1P35611 737 aaKnown RBP9.93□□□□□ -0.82
HPS4-206ENST00000439453 TNNT3P45378 269 aaPredicted RBP9.93□□□□□ -0.82
HPS4-206ENST00000439453 TMCO3Q6UWJ1 677 aa9.93□□□□□ -0.82
HPS4-206ENST00000439453 NBPF5PQ86XG9 351 aaPredicted RBP9.93□□□□□ -0.82
HPS4-206ENST00000439453 CCDC150Q8NCX0 1101 aa9.93□□□□□ -0.82
HPS4-206ENST00000439453 ARGLU1Q9NWB6 273 aaPredicted RBP9.93□□□□□ -0.82
HPS4-206ENST00000439453 TUBB4AP04350 444 aa9.92□□□□□ -0.82
HPS4-206ENST00000439453 CASP7P55210 303 aa9.92□□□□□ -0.82
HPS4-206ENST00000439453 TPM4P67936 248 aa9.92□□□□□ -0.82
HPS4-206ENST00000439453 SLC10A5Q5PT55 438 aa9.92□□□□□ -0.82
HPS4-206ENST00000439453 ERC1Q8IUD2 1116 aa9.92□□□□□ -0.82
HPS4-206ENST00000439453 NAT10Q9H0A0 1025 aaKnown RBP9.92□□□□□ -0.82
HPS4-206ENST00000439453 HMG20BQ9P0W2 317 aa9.92□□□□□ -0.82
HPS4-206ENST00000439453 SRGNP10124 158 aa9.92□□□□□ -0.82
HPS4-206ENST00000439453 MTX1Q13505 466 aa9.92□□□□□ -0.82
HPS4-206ENST00000439453 PARP10Q53GL7 1025 aa9.92□□□□□ -0.82
HPS4-206ENST00000439453 ARMCX5Q6P1M9 558 aa9.92□□□□□ -0.82
HPS4-206ENST00000439453 TRIM34Q9BYJ4 488 aa9.92□□□□□ -0.82
HPS4-206ENST00000439453 ORC3Q9UBD5 711 aaPredicted RBP9.92□□□□□ -0.82
HPS4-206ENST00000439453 FEZ2Q9UHY8 353 aaPredicted RBP9.92□□□□□ -0.82
HPS4-206ENST00000439453 PA2G4Q9UQ80 394 aaKnown RBP9.92□□□□□ -0.82
HPS4-206ENST00000439453 POLR3GO15318 223 aaPredicted RBP9.92□□□□□ -0.82
HPS4-206ENST00000439453 RAD51AP2Q09MP3 1159 aa9.92□□□□□ -0.82
HPS4-206ENST00000439453 TSGA10IPQ3SY00 556 aa9.92□□□□□ -0.82
HPS4-206ENST00000439453 ENGASEQ8NFI3 743 aa9.92□□□□□ -0.82
HPS4-206ENST00000439453 UBXN4Q92575 508 aa9.92□□□□□ -0.82
HPS4-206ENST00000439453 FBXW7Q969H0 707 aa9.92□□□□□ -0.82
HPS4-206ENST00000439453 MYD88Q99836 296 aa9.92□□□□□ -0.82
HPS4-206ENST00000439453 FTOQ9C0B1 505 aaKnown RBP eCLIP9.92□□□□□ -0.82
HPS4-206ENST00000439453 KCNJ6P48051 423 aa9.91□□□□□ -0.82
HPS4-206ENST00000439453 FAM160A1Q05DH4 1040 aa9.91□□□□□ -0.82
HPS4-206ENST00000439453 GORABQ5T7V8 394 aa9.91□□□□□ -0.82
HPS4-206ENST00000439453 TMC6Q7Z403 805 aa9.91□□□□□ -0.82
HPS4-206ENST00000439453 PLCD3Q8N3E9 789 aa9.91□□□□□ -0.82
HPS4-206ENST00000439453 NEK11Q8NG66 645 aa9.91□□□□□ -0.82
HPS4-206ENST00000439453 MYH15Q9Y2K3 1946 aa9.91□□□□□ -0.82
HPS4-206ENST00000439453 NEURL1BA8MQ27 555 aa9.91□□□□□ -0.82
HPS4-206ENST00000439453 SFPQP23246 707 aaKnown RBP eCLIP9.91□□□□□ -0.82
HPS4-206ENST00000439453 CWF19L2Q2TBE0 894 aaKnown RBP9.91□□□□□ -0.82
HPS4-206ENST00000439453 HSP90AB3PQ58FF7 597 aa9.91□□□□□ -0.82
HPS4-206ENST00000439453 TXLNBQ8N3L3 684 aa9.91□□□□□ -0.82
HPS4-206ENST00000439453 FSD1Q9BTV5 496 aa9.91□□□□□ -0.82
HPS4-206ENST00000439453 MED23Q9ULK4 1368 aa9.91□□□□□ -0.82
HPS4-206ENST00000439453 COL4A5P29400 1685 aa9.91□□□□□ -0.82
HPS4-206ENST00000439453 HSP90B1P14625 803 aaKnown RBP9.91□□□□□ -0.82
HPS4-206ENST00000439453 HOMER1Q86YM7 354 aa9.91□□□□□ -0.82
HPS4-206ENST00000439453 FSIP1Q8NA03 581 aa9.91□□□□□ -0.82
HPS4-206ENST00000439453 ERCC4Q92889 916 aaPredicted RBP9.91□□□□□ -0.82
HPS4-206ENST00000439453 XPO4Q9C0E2 1151 aaKnown RBP9.91□□□□□ -0.82
HPS4-206ENST00000439453 WWC3Q9ULE0 1092 aa9.91□□□□□ -0.82
HPS4-206ENST00000439453 SMC2O95347 1197 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms