RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 APOA5Q6Q788 366 aa16.62■□□□□ 0.25
ERCC3-202ENST00000426778 CGNQ9P2M7 1197 aaKnown RBP16.62■□□□□ 0.25
ERCC3-202ENST00000426778 TBC1D2BQ9UPU7 963 aa16.62■□□□□ 0.25
ERCC3-202ENST00000426778 SPATA31A3Q5VYP0 1347 aa16.62■□□□□ 0.25
ERCC3-202ENST00000426778 ABCC6O95255 1503 aa16.62■□□□□ 0.25
ERCC3-202ENST00000426778 SMIM22K7EJ46 135 aa16.62■□□□□ 0.25
ERCC3-202ENST00000426778 PRKAB2O43741 272 aa16.62■□□□□ 0.25
ERCC3-202ENST00000426778 HSPA2P54652 639 aa16.62■□□□□ 0.25
ERCC3-202ENST00000426778 SLC39A14Q15043 492 aa16.62■□□□□ 0.25
ERCC3-202ENST00000426778 BRAPQ7Z569 592 aa16.62■□□□□ 0.25
ERCC3-202ENST00000426778 FOXP4Q8IVH2 680 aaPredicted RBP16.62■□□□□ 0.25
ERCC3-202ENST00000426778 TMOD3Q9NYL9 352 aa16.62■□□□□ 0.25
ERCC3-202ENST00000426778 IQSEC3Q9UPP2 1182 aaPredicted RBP16.62■□□□□ 0.25
ERCC3-202ENST00000426778 TACC3Q9Y6A5 838 aa16.62■□□□□ 0.25
ERCC3-202ENST00000426778 ADD2P35612 726 aa16.61■□□□□ 0.25
ERCC3-202ENST00000426778 UBASH3AP57075 661 aa16.61■□□□□ 0.25
ERCC3-202ENST00000426778 PDE4BQ07343 736 aa16.61■□□□□ 0.25
ERCC3-202ENST00000426778 KIF6Q6ZMV9 814 aa16.61■□□□□ 0.25
ERCC3-202ENST00000426778 EPC1Q9H2F5 836 aa16.61■□□□□ 0.25
ERCC3-202ENST00000426778 FANCLQ9NW38 375 aa16.61■□□□□ 0.25
ERCC3-202ENST00000426778 ZFYP08048 801 aaPredicted RBP16.61■□□□□ 0.25
ERCC3-202ENST00000426778 CMA1P23946 247 aa16.61■□□□□ 0.25
ERCC3-202ENST00000426778 ZNF771Q7L3S4 317 aaPredicted RBP16.61■□□□□ 0.25
ERCC3-202ENST00000426778 TRMT44Q8IYL2 757 aaKnown RBP16.61■□□□□ 0.25
ERCC3-202ENST00000426778 TTLL11Q8NHH1 800 aa16.61■□□□□ 0.25
ERCC3-202ENST00000426778 UTP14AQ9BVJ6 771 aaKnown RBP16.61■□□□□ 0.25
ERCC3-202ENST00000426778 OSBPL5Q9H0X9 879 aaPredicted RBP16.61■□□□□ 0.25
ERCC3-202ENST00000426778 OGFRQ9NZT2 677 aa16.61■□□□□ 0.25
ERCC3-202ENST00000426778 DNAI1Q9UI46 699 aa16.61■□□□□ 0.25
ERCC3-202ENST00000426778 RIPOR2Q9Y4F9 1068 aa16.61■□□□□ 0.25
ERCC3-202ENST00000426778 hCG_1642624A0A1W2PR95 340 aa16.6■□□□□ 0.25
ERCC3-202ENST00000426778 GOLGA8AA7E2F4 631 aa16.6■□□□□ 0.25
ERCC3-202ENST00000426778 IL2RBP14784 551 aa16.6■□□□□ 0.25
ERCC3-202ENST00000426778 GSDMDP57764 484 aa16.6■□□□□ 0.25
ERCC3-202ENST00000426778 TMEM67Q5HYA8 995 aa16.6■□□□□ 0.25
ERCC3-202ENST00000426778 ARMT1Q9H993 441 aa16.6■□□□□ 0.25
ERCC3-202ENST00000426778 TNS3Q68CZ2 1445 aa16.6■□□□□ 0.25
ERCC3-202ENST00000426778 WDR17Q8IZU2 1322 aa16.6■□□□□ 0.25
ERCC3-202ENST00000426778 BTBD18B2RXH4 712 aa16.6■□□□□ 0.25
ERCC3-202ENST00000426778 SH2B2O14492 632 aaPredicted RBP16.6■□□□□ 0.25
ERCC3-202ENST00000426778 EVA1CP58658 441 aa16.6■□□□□ 0.25
ERCC3-202ENST00000426778 RIC1Q4ADV7 1423 aa16.6■□□□□ 0.25
ERCC3-202ENST00000426778 METTL16Q86W50 562 aaKnown RBP16.6■□□□□ 0.25
ERCC3-202ENST00000426778 AIDAQ96BJ3 306 aa16.6■□□□□ 0.25
ERCC3-202ENST00000426778 TRMT112Q9UI30 125 aaKnown RBP16.6■□□□□ 0.25
ERCC3-202ENST00000426778 DDX41Q9UJV9 622 aaKnown RBP16.6■□□□□ 0.25
ERCC3-202ENST00000426778 ERVV-2B6SEH9 535 aa16.59■□□□□ 0.25
ERCC3-202ENST00000426778 FANCGO15287 622 aa16.59■□□□□ 0.25
ERCC3-202ENST00000426778 ZBTB43O43298 467 aa16.59■□□□□ 0.25
ERCC3-202ENST00000426778 SLU7O95391 586 aaKnown RBP16.59■□□□□ 0.25
ERCC3-202ENST00000426778 PDE6AP16499 860 aa16.59■□□□□ 0.25
ERCC3-202ENST00000426778 IARSP41252 1262 aaKnown RBP16.59■□□□□ 0.25
ERCC3-202ENST00000426778 LRRFIP1Q32MZ4 808 aaKnown RBP16.59■□□□□ 0.25
ERCC3-202ENST00000426778 CCDC102BQ68D86 513 aa16.59■□□□□ 0.25
ERCC3-202ENST00000426778 PIGBQ92521 554 aa16.59■□□□□ 0.25
ERCC3-202ENST00000426778 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.59■□□□□ 0.251e-6■□□□□ 10.8
ERCC3-202ENST00000426778 ZMYM6O95789 1325 aa16.59■□□□□ 0.25
ERCC3-202ENST00000426778 NUP188Q5SRE5 1749 aa16.59■□□□□ 0.25
ERCC3-202ENST00000426778 ZBTB38Q8NAP3 1195 aaPredicted RBP16.59■□□□□ 0.25
ERCC3-202ENST00000426778 ATG3Q9NT62 314 aa16.59■□□□□ 0.25
ERCC3-202ENST00000426778 PCDHA5Q9Y5H7 936 aa16.59■□□□□ 0.25
ERCC3-202ENST00000426778 KCPQ6ZWJ8 1503 aa16.59■□□□□ 0.25
ERCC3-202ENST00000426778 UBN2Q6ZU65 1347 aa16.59■□□□□ 0.25
ERCC3-202ENST00000426778 IRS4O14654 1257 aaPredicted RBP16.59■□□□□ 0.25
ERCC3-202ENST00000426778 PCCAP05165 728 aaPredicted RBP16.59■□□□□ 0.25
ERCC3-202ENST00000426778 BMP6P22004 513 aa16.59■□□□□ 0.25
ERCC3-202ENST00000426778 PTPAQ15257 358 aa16.59■□□□□ 0.25
ERCC3-202ENST00000426778 MAGEB6Q8N7X4 407 aa16.59■□□□□ 0.25
ERCC3-202ENST00000426778 MIGA1Q8NAN2 632 aa16.59■□□□□ 0.25
ERCC3-202ENST00000426778 CNNM3Q8NE01 707 aa16.59■□□□□ 0.25
ERCC3-202ENST00000426778 BAZ2BQ9UIF8 2168 aaKnown RBP16.58■□□□□ 0.25
ERCC3-202ENST00000426778 IFIT3O14879 490 aaKnown RBP16.58■□□□□ 0.24
ERCC3-202ENST00000426778 MBD4O95243 580 aa16.58■□□□□ 0.24
ERCC3-202ENST00000426778 NR5A1Q13285 461 aa16.58■□□□□ 0.24
ERCC3-202ENST00000426778 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.58■□□□□ 0.24
ERCC3-202ENST00000426778 EPB41L4AQ9HCS5 686 aaPredicted RBP16.58■□□□□ 0.24
ERCC3-202ENST00000426778 FAM217BQ9NTX9 383 aaPredicted RBP16.58■□□□□ 0.24
ERCC3-202ENST00000426778 ZSWIM5Q9P217 1185 aa16.58■□□□□ 0.24
ERCC3-202ENST00000426778 PRR29P0C7W0 189 aa16.58■□□□□ 0.24
ERCC3-202ENST00000426778 TPM4P67936 248 aa16.58■□□□□ 0.24
ERCC3-202ENST00000426778 NUP133Q8WUM0 1156 aa16.58■□□□□ 0.24
ERCC3-202ENST00000426778 FEZ1Q99689 392 aa16.58■□□□□ 0.24
ERCC3-202ENST00000426778 ZNF446Q9NWS9 450 aa16.58■□□□□ 0.24
ERCC3-202ENST00000426778 CPDO75976 1380 aa16.58■□□□□ 0.24
ERCC3-202ENST00000426778 LAMB4A4D0S4 1761 aa16.58■□□□□ 0.24
ERCC3-202ENST00000426778 USP49Q70CQ1 688 aa16.57■□□□□ 0.24
ERCC3-202ENST00000426778 NLRP10Q86W26 655 aa16.57■□□□□ 0.24
ERCC3-202ENST00000426778 ZNF397Q8NF99 534 aaPredicted RBP16.57■□□□□ 0.24
ERCC3-202ENST00000426778 MAP3K14Q99558 947 aa16.57■□□□□ 0.24
ERCC3-202ENST00000426778 LY9Q9HBG7 655 aa16.57■□□□□ 0.24
ERCC3-202ENST00000426778 ADAMTSL3P82987 1691 aa16.57■□□□□ 0.24
ERCC3-202ENST00000426778 COBLO75128 1261 aa16.57■□□□□ 0.24
ERCC3-202ENST00000426778 CSF1RP07333 972 aa16.57■□□□□ 0.24
ERCC3-202ENST00000426778 CASP1P29466 404 aa16.57■□□□□ 0.24
ERCC3-202ENST00000426778 IGDCC4Q8TDY8 1250 aa16.57■□□□□ 0.24
ERCC3-202ENST00000426778 ERO1AQ96HE7 468 aa16.57■□□□□ 0.24
ERCC3-202ENST00000426778 ZBTB1Q9Y2K1 713 aa16.57■□□□□ 0.24
ERCC3-202ENST00000426778 LMTK3Q96Q04 1460 aa16.57■□□□□ 0.24
ERCC3-202ENST00000426778 ANKRD18BA2A2Z9 1011 aa16.56■□□□□ 0.24
ERCC3-202ENST00000426778 TRIM29Q14134 588 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms