RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 CCL15Q16663 113 aa14.33□□□□□ -0.12
SQSTM1-203ENST00000422245 CCDC102BQ68D86 513 aa14.33□□□□□ -0.12
SQSTM1-203ENST00000422245 ATF7IPQ6VMQ6 1270 aa14.33□□□□□ -0.12
SQSTM1-203ENST00000422245 CNKSR2Q8WXI2 1034 aa14.33□□□□□ -0.12
SQSTM1-203ENST00000422245 BRI3BPQ8WY22 251 aa14.33□□□□□ -0.12
SQSTM1-203ENST00000422245 OTUD5Q96G74 571 aa14.33□□□□□ -0.12
SQSTM1-203ENST00000422245 PTPN18Q99952 460 aa14.33□□□□□ -0.12
SQSTM1-203ENST00000422245 AKAP2Q9Y2D5 859 aa14.33□□□□□ -0.12
SQSTM1-203ENST00000422245 SNCAIPQ9Y6H5 919 aa14.33□□□□□ -0.12
SQSTM1-203ENST00000422245 CDC42EP5Q6NZY7 148 aa14.32□□□□□ -0.12
SQSTM1-203ENST00000422245 ERO1BQ86YB8 467 aa14.32□□□□□ -0.12
SQSTM1-203ENST00000422245 FAM151AQ8WW52 585 aa14.32□□□□□ -0.12
SQSTM1-203ENST00000422245 ZNF341Q9BYN7 854 aa14.32□□□□□ -0.12
SQSTM1-203ENST00000422245 TRIM17Q9Y577 477 aa14.32□□□□□ -0.12
SQSTM1-203ENST00000422245 WDHD1O75717 1129 aaPredicted RBP14.31□□□□□ -0.12
SQSTM1-203ENST00000422245 GNAI2P04899 355 aa14.31□□□□□ -0.12
SQSTM1-203ENST00000422245 ADORA1P30542 326 aa14.31□□□□□ -0.12
SQSTM1-203ENST00000422245 RASGRF1Q13972 1273 aa14.31□□□□□ -0.12
SQSTM1-203ENST00000422245 MVPQ14764 893 aaKnown RBP14.31□□□□□ -0.12
SQSTM1-203ENST00000422245 OTOP1Q7RTM1 612 aa14.31□□□□□ -0.12
SQSTM1-203ENST00000422245 FRAT1Q92837 279 aaPredicted RBP14.31□□□□□ -0.12
SQSTM1-203ENST00000422245 A0A1B0GUL7 405 aa14.3□□□□□ -0.12
SQSTM1-203ENST00000422245 BCAR3O75815 825 aa14.3□□□□□ -0.12
SQSTM1-203ENST00000422245 CETPP11597 493 aa14.3□□□□□ -0.12
SQSTM1-203ENST00000422245 TFCP2Q12800 502 aa14.3□□□□□ -0.12
SQSTM1-203ENST00000422245 NFIAQ12857 509 aa14.3□□□□□ -0.12
SQSTM1-203ENST00000422245 PPIL2Q13356 520 aa14.3□□□□□ -0.12
SQSTM1-203ENST00000422245 SNAPC2Q13487 334 aa14.3□□□□□ -0.12
SQSTM1-203ENST00000422245 TAF1CQ15572 869 aaPredicted RBP14.3□□□□□ -0.12
SQSTM1-203ENST00000422245 DZIP1Q86YF9 867 aaKnown RBP14.3□□□□□ -0.12
SQSTM1-203ENST00000422245 SLF2Q8IX21 1173 aa14.3□□□□□ -0.12
SQSTM1-203ENST00000422245 ZFYVE28Q9HCC9 887 aa14.3□□□□□ -0.12
SQSTM1-203ENST00000422245 ZCCHC17Q9NP64 241 aaKnown RBP14.3□□□□□ -0.12
SQSTM1-203ENST00000422245 MYH2Q9UKX2 1941 aa14.3□□□□□ -0.12
SQSTM1-203ENST00000422245 GAKO14976 1311 aa14.3□□□□□ -0.12
SQSTM1-203ENST00000422245 DOCK2Q92608 1830 aa14.29□□□□□ -0.12
SQSTM1-203ENST00000422245 AK9Q5TCS8 1911 aa14.29□□□□□ -0.12
SQSTM1-203ENST00000422245 SP3Q02447 781 aa14.29□□□□□ -0.12
SQSTM1-203ENST00000422245 TCP10Q12799 353 aa14.29□□□□□ -0.12
SQSTM1-203ENST00000422245 SPTY2D1Q68D10 685 aaPredicted RBP14.29□□□□□ -0.12
SQSTM1-203ENST00000422245 CD99L2Q8TCZ2 262 aa14.29□□□□□ -0.12
SQSTM1-203ENST00000422245 ZKSCAN4Q969J2 545 aaPredicted RBP14.29□□□□□ -0.12
SQSTM1-203ENST00000422245 XAGE2Q96GT9 111 aa14.29□□□□□ -0.12
SQSTM1-203ENST00000422245 USP40Q9NVE5 1235 aa14.29□□□□□ -0.12
SQSTM1-203ENST00000422245 RFX7Q2KHR2 1363 aa14.29□□□□□ -0.12
SQSTM1-203ENST00000422245 IRF6O14896 467 aa14.28□□□□□ -0.12
SQSTM1-203ENST00000422245 TIMM10P62072 90 aa14.28□□□□□ -0.12
SQSTM1-203ENST00000422245 PPATQ06203 517 aa14.28□□□□□ -0.12
SQSTM1-203ENST00000422245 ARHGEF6Q15052 776 aa14.28□□□□□ -0.12
SQSTM1-203ENST00000422245 NOL9Q5SY16 702 aaKnown RBP14.28□□□□□ -0.12
SQSTM1-203ENST00000422245 ZKSCAN2Q63HK3 967 aa14.28□□□□□ -0.12
SQSTM1-203ENST00000422245 MIGA2Q7L4E1 593 aa14.28□□□□□ -0.12
SQSTM1-203ENST00000422245 FAM43AQ8N2R8 423 aa14.28□□□□□ -0.12
SQSTM1-203ENST00000422245 CLUAP1Q96AJ1 413 aa14.28□□□□□ -0.12
SQSTM1-203ENST00000422245 IDI2Q9BXS1 227 aa14.28□□□□□ -0.12
SQSTM1-203ENST00000422245 EFCC1Q9HA90 598 aa14.28□□□□□ -0.12
SQSTM1-203ENST00000422245 FAM198AQ9UFP1 575 aa14.28□□□□□ -0.12
SQSTM1-203ENST00000422245 ABCF2Q9UG63 623 aa14.28□□□□□ -0.12
SQSTM1-203ENST00000422245 ZNF112Q9UJU3 913 aa14.28□□□□□ -0.12
SQSTM1-203ENST00000422245 RBBP6Q7Z6E9 1792 aaKnown RBP14.27□□□□□ -0.12
SQSTM1-203ENST00000422245 ENTPD3O75355 529 aa14.27□□□□□ -0.13
SQSTM1-203ENST00000422245 INPP5BP32019 993 aa14.27□□□□□ -0.13
SQSTM1-203ENST00000422245 HNRNPUQ00839 825 aaKnown RBP eCLIP14.27□□□□□ -0.13
SQSTM1-203ENST00000422245 TNNQ9UQP3 1299 aa14.27□□□□□ -0.13
SQSTM1-203ENST00000422245 PTPN22Q9Y2R2 807 aa14.27□□□□□ -0.13
SQSTM1-203ENST00000422245 TNRC18O15417 2968 aaPredicted RBP14.27□□□□□ -0.13
SQSTM1-203ENST00000422245 ATRNL1Q5VV63 1379 aa14.26□□□□□ -0.13
SQSTM1-203ENST00000422245 MROH7-TTC4A0A0A0MT08 1334 aa14.26□□□□□ -0.13
SQSTM1-203ENST00000422245 PNMA6EA0A0J9YXQ4 647 aa14.26□□□□□ -0.13
SQSTM1-203ENST00000422245 BTBD19C9JJ37 291 aa14.26□□□□□ -0.13
SQSTM1-203ENST00000422245 RGS3P49796 1198 aa14.26□□□□□ -0.13
SQSTM1-203ENST00000422245 G3BP1Q13283 466 aaKnown RBP eCLIP14.26□□□□□ -0.13
SQSTM1-203ENST00000422245 GORABQ5T7V8 394 aa14.26□□□□□ -0.13
SQSTM1-203ENST00000422245 TMEM57Q8N5G2 664 aa14.26□□□□□ -0.13
SQSTM1-203ENST00000422245 FAM163AQ96GL9 167 aaPredicted RBP14.26□□□□□ -0.13
SQSTM1-203ENST00000422245 NEUROD6Q96NK8 337 aa14.26□□□□□ -0.13
SQSTM1-203ENST00000422245 KCNH4Q9UQ05 1017 aa14.26□□□□□ -0.13
SQSTM1-203ENST00000422245 TLR2O60603 784 aa14.25□□□□□ -0.13
SQSTM1-203ENST00000422245 ARID4AP29374 1257 aaPredicted RBP14.25□□□□□ -0.13
SQSTM1-203ENST00000422245 BTDP43251 543 aa14.25□□□□□ -0.13
SQSTM1-203ENST00000422245 ERICH6Q7L0X2 663 aa14.25□□□□□ -0.13
SQSTM1-203ENST00000422245 FTSJ3Q8IY81 847 aaKnown RBP14.25□□□□□ -0.13
SQSTM1-203ENST00000422245 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.25□□□□□ -0.13
SQSTM1-203ENST00000422245 ARMC5Q96C12 935 aa14.25□□□□□ -0.13
SQSTM1-203ENST00000422245 HMG20BQ9P0W2 317 aa14.25□□□□□ -0.13
SQSTM1-203ENST00000422245 UQCRFS1P1P0C7P4 283 aa14.24□□□□□ -0.13
SQSTM1-203ENST00000422245 GSTO1P78417 241 aa14.24□□□□□ -0.13
SQSTM1-203ENST00000422245 MECOMQ03112 1051 aa14.24□□□□□ -0.13
SQSTM1-203ENST00000422245 ANKRD23Q86SG2 305 aa14.24□□□□□ -0.13
SQSTM1-203ENST00000422245 ZFPM1Q8IX07 1006 aa14.24□□□□□ -0.13
SQSTM1-203ENST00000422245 SPATA5Q8NB90 893 aa14.24□□□□□ -0.13
SQSTM1-203ENST00000422245 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.24□□□□□ -0.13
SQSTM1-203ENST00000422245 GPR75-ASB3A0A0A6YYF3 556 aa14.23□□□□□ -0.13
SQSTM1-203ENST00000422245 NPM3O75607 178 aaKnown RBP14.23□□□□□ -0.13
SQSTM1-203ENST00000422245 MAP4K4O95819 1239 aaPredicted RBP14.23□□□□□ -0.13
SQSTM1-203ENST00000422245 POLA2Q14181 598 aa14.23□□□□□ -0.13
SQSTM1-203ENST00000422245 KIF22Q14807 665 aa14.23□□□□□ -0.13
SQSTM1-203ENST00000422245 ZSCAN29Q8IWY8 852 aaPredicted RBP14.23□□□□□ -0.13
SQSTM1-203ENST00000422245 SCYL3Q8IZE3 742 aa14.23□□□□□ -0.13
SQSTM1-203ENST00000422245 GPR108Q9NPR9 543 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms