RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 LEMD3Q9Y2U8 911 aa7.74□□□□□ -1.17
PTPRK-209ENST00000415046 SYNGAP1Q96PV0 1343 aa7.74□□□□□ -1.17
PTPRK-209ENST00000415046 COL17A1Q9UMD9 1497 aaPredicted RBP7.74□□□□□ -1.17
PTPRK-209ENST00000415046 FOSL1P15407 271 aa7.73□□□□□ -1.17
PTPRK-209ENST00000415046 MSMPQ1L6U9 139 aa7.73□□□□□ -1.17
PTPRK-209ENST00000415046 AKAP4Q5JQC9 854 aa7.73□□□□□ -1.17
PTPRK-209ENST00000415046 SHISA5Q8N114 240 aa7.73□□□□□ -1.17
PTPRK-209ENST00000415046 GATA6Q92908 595 aa7.73□□□□□ -1.17
PTPRK-209ENST00000415046 ACSS3Q9H6R3 686 aa7.73□□□□□ -1.17
PTPRK-209ENST00000415046 RAD18Q9NS91 495 aa7.73□□□□□ -1.17
PTPRK-209ENST00000415046 LAMC3Q9Y6N6 1575 aa7.72□□□□□ -1.17
PTPRK-209ENST00000415046 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.72□□□□□ -1.17
PTPRK-209ENST00000415046 WNT11O96014 354 aa7.72□□□□□ -1.17
PTPRK-209ENST00000415046 RAB6AP20340 208 aa7.72□□□□□ -1.17
PTPRK-209ENST00000415046 ADMP35318 185 aa7.72□□□□□ -1.17
PTPRK-209ENST00000415046 IRAK1P51617 712 aa7.72□□□□□ -1.17
PTPRK-209ENST00000415046 FAAP100Q0VG06 881 aa7.72□□□□□ -1.17
PTPRK-209ENST00000415046 TMC7Q7Z402 723 aa7.72□□□□□ -1.17
PTPRK-209ENST00000415046 EPS8L3Q8TE67 593 aaKnown RBP7.72□□□□□ -1.17
PTPRK-209ENST00000415046 TBC1D32Q96NH3 1257 aa7.72□□□□□ -1.17
PTPRK-209ENST00000415046 WDR18Q9BV38 432 aa7.72□□□□□ -1.17
PTPRK-209ENST00000415046 SEMA6CQ9H3T2 930 aa7.72□□□□□ -1.17
PTPRK-209ENST00000415046 FAM105AQ9NUU6 356 aa7.72□□□□□ -1.17
PTPRK-209ENST00000415046 DCTN4Q9UJW0 460 aa7.72□□□□□ -1.17
PTPRK-209ENST00000415046 AP4E1Q9UPM8 1137 aa7.72□□□□□ -1.17
PTPRK-209ENST00000415046 AOC2O75106 756 aa7.71□□□□□ -1.18
PTPRK-209ENST00000415046 BRD1O95696 1058 aa7.71□□□□□ -1.18
PTPRK-209ENST00000415046 MAP7Q14244 749 aa7.71□□□□□ -1.18
PTPRK-209ENST00000415046 PDE3AQ14432 1141 aa7.71□□□□□ -1.18
PTPRK-209ENST00000415046 DYMQ7RTS9 669 aa7.71□□□□□ -1.18
PTPRK-209ENST00000415046 NFICP08651 508 aa7.7□□□□□ -1.18
PTPRK-209ENST00000415046 KRTAP4-12Q9BQ66 201 aa7.7□□□□□ -1.18
PTPRK-209ENST00000415046 FAM170BA6NMN3 283 aa7.69□□□□□ -1.18
PTPRK-209ENST00000415046 PRNPP04156 253 aa7.69□□□□□ -1.18
PTPRK-209ENST00000415046 BIN2Q9UBW5 565 aaPredicted RBP7.69□□□□□ -1.18
PTPRK-209ENST00000415046 CCDC88BA6NC98 1476 aa7.68□□□□□ -1.18
PTPRK-209ENST00000415046 ERCC6Q03468 1493 aa7.68□□□□□ -1.18
PTPRK-209ENST00000415046 ASPAP45381 313 aa7.68□□□□□ -1.18
PTPRK-209ENST00000415046 DSC3Q14574 896 aa7.68□□□□□ -1.18
PTPRK-209ENST00000415046 PI16Q6UXB8 463 aa7.68□□□□□ -1.18
PTPRK-209ENST00000415046 SEZ6L2Q6UXD5 910 aa7.68□□□□□ -1.18
PTPRK-209ENST00000415046 CCDC86Q9H6F5 360 aaKnown RBP7.68□□□□□ -1.18
PTPRK-209ENST00000415046 NLRP2Q9NX02 1062 aa7.68□□□□□ -1.18
PTPRK-209ENST00000415046 PPP1R9AQ9ULJ8 1098 aa7.68□□□□□ -1.18
PTPRK-209ENST00000415046 TIMELESSQ9UNS1 1208 aa7.68□□□□□ -1.18
PTPRK-209ENST00000415046 TMPRSS2O15393 492 aa7.67□□□□□ -1.18
PTPRK-209ENST00000415046 TREHO43280 583 aa7.67□□□□□ -1.18
PTPRK-209ENST00000415046 XRCC5P13010 732 aaKnown RBP7.67□□□□□ -1.18
PTPRK-209ENST00000415046 ZNF157P51786 506 aaPredicted RBP7.67□□□□□ -1.18
PTPRK-209ENST00000415046 FCGRTP55899 365 aa7.67□□□□□ -1.18
PTPRK-209ENST00000415046 DTHD1Q6ZMT9 781 aa7.67□□□□□ -1.18
PTPRK-209ENST00000415046 C1GALT1Q9NS00 363 aa7.67□□□□□ -1.18
PTPRK-209ENST00000415046 KRT82Q9NSB4 513 aa7.67□□□□□ -1.18
PTPRK-209ENST00000415046 CYP26A1O43174 497 aa7.66□□□□□ -1.18
PTPRK-209ENST00000415046 GSTP1P09211 210 aaKnown RBP7.66□□□□□ -1.18
PTPRK-209ENST00000415046 CYP27A1Q02318 531 aa7.66□□□□□ -1.18
PTPRK-209ENST00000415046 ENOX2Q16206 610 aaKnown RBP7.66□□□□□ -1.18
PTPRK-209ENST00000415046 LCE3BQ5TA77 95 aa7.66□□□□□ -1.18
PTPRK-209ENST00000415046 NFXL1Q6ZNB6 911 aa7.66□□□□□ -1.18
PTPRK-209ENST00000415046 VSIG10LQ86VR7 867 aa7.66□□□□□ -1.18
PTPRK-209ENST00000415046 WDR89Q96FK6 387 aaPredicted RBP7.66□□□□□ -1.18
PTPRK-209ENST00000415046 BCO2Q9BYV7 579 aa7.66□□□□□ -1.18
PTPRK-209ENST00000415046 TMEM39AQ9NV64 488 aa7.66□□□□□ -1.18
PTPRK-209ENST00000415046 CRIM1Q9NZV1 1036 aa7.66□□□□□ -1.18
PTPRK-209ENST00000415046 CCDC39Q9UFE4 941 aa7.66□□□□□ -1.18
PTPRK-209ENST00000415046 ANGEL1Q9UNK9 670 aaKnown RBP7.66□□□□□ -1.18
PTPRK-209ENST00000415046 DAGLAQ9Y4D2 1042 aa7.66□□□□□ -1.18
PTPRK-209ENST00000415046 PCDHGC5Q9Y5F6 944 aa7.66□□□□□ -1.18
PTPRK-209ENST00000415046 PNMA6FA0A0J9YX94 578 aa7.65□□□□□ -1.18
PTPRK-209ENST00000415046 DYNC1LI2O43237 492 aaPredicted RBP7.65□□□□□ -1.18
PTPRK-209ENST00000415046 ZNF862O60290 1169 aa7.65□□□□□ -1.18
PTPRK-209ENST00000415046 TAL1P17542 331 aaPredicted RBP7.65□□□□□ -1.18
PTPRK-209ENST00000415046 LIG1P18858 919 aa7.65□□□□□ -1.18
PTPRK-209ENST00000415046 MAPK1P28482 360 aa7.65□□□□□ -1.18
PTPRK-209ENST00000415046 HNRNPUQ00839 825 aaKnown RBP eCLIP7.65□□□□□ -1.18
PTPRK-209ENST00000415046 PPP2R3AQ06190 1150 aa7.65□□□□□ -1.18
PTPRK-209ENST00000415046 KIF4BQ2VIQ3 1234 aa7.65□□□□□ -1.18
PTPRK-209ENST00000415046 ZNF765Q7L2R6 523 aa7.65□□□□□ -1.18
PTPRK-209ENST00000415046 PDZD3Q86UT5 571 aa7.65□□□□□ -1.18
PTPRK-209ENST00000415046 THOC2Q8NI27 1593 aaKnown RBP7.65□□□□□ -1.18
PTPRK-209ENST00000415046 PPP4R2Q9NY27 417 aa7.65□□□□□ -1.18
PTPRK-209ENST00000415046 GPN3Q9UHW5 284 aaPredicted RBP7.65□□□□□ -1.18
PTPRK-209ENST00000415046 ADGRE2Q9UHX3 823 aa7.65□□□□□ -1.18
PTPRK-209ENST00000415046 PAX4O43316 350 aa7.64□□□□□ -1.19
PTPRK-209ENST00000415046 ID3Q02535 119 aa7.64□□□□□ -1.19
PTPRK-209ENST00000415046 DUSP27Q5VZP5 1158 aa7.64□□□□□ -1.19
PTPRK-209ENST00000415046 FANCD2OSQ96PS1 177 aa7.64□□□□□ -1.19
PTPRK-209ENST00000415046 ZC3H12CQ9C0D7 883 aaKnown RBP7.64□□□□□ -1.19
PTPRK-209ENST00000415046 ATXN3LQ9H3M9 355 aa7.64□□□□□ -1.19
PTPRK-209ENST00000415046 BSDC1Q9NW68 430 aaPredicted RBP7.64□□□□□ -1.19
PTPRK-209ENST00000415046 CADPSQ9ULU8 1353 aa7.63□□□□□ -1.19
PTPRK-209ENST00000415046 SLFN14P0C7P3 912 aa7.63□□□□□ -1.19
PTPRK-209ENST00000415046 PLCB3Q01970 1234 aa7.63□□□□□ -1.19
PTPRK-209ENST00000415046 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.63□□□□□ -1.19
PTPRK-209ENST00000415046 ABI1Q8IZP0 508 aa7.63□□□□□ -1.19
PTPRK-209ENST00000415046 FMNL2Q96PY5 1086 aa7.63□□□□□ -1.19
PTPRK-209ENST00000415046 OGFOD3Q6PK18 319 aa7.62□□□□□ -1.19
PTPRK-209ENST00000415046 NXPE4Q6UWF7 544 aa7.62□□□□□ -1.19
PTPRK-209ENST00000415046 SULF2Q8IWU5 870 aa7.62□□□□□ -1.19
PTPRK-209ENST00000415046 C3orf58Q8NDZ4 430 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 163 ms