RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 FBXO33Q7Z6M2 555 aa18.01■□□□□ 0.47
LRCH3-202ENST00000414675 PDLIM2Q96JY6 352 aa18.01■□□□□ 0.47
LRCH3-202ENST00000414675 GJB4Q9NTQ9 266 aa18.01■□□□□ 0.47
LRCH3-202ENST00000414675 MYH13Q9UKX3 1938 aa18.01■□□□□ 0.47
LRCH3-202ENST00000414675 LETM1O95202 739 aaPredicted RBP18.01■□□□□ 0.47
LRCH3-202ENST00000414675 RFC4P35249 363 aa18.01■□□□□ 0.47
LRCH3-202ENST00000414675 TDO2P48775 406 aa18.01■□□□□ 0.47
LRCH3-202ENST00000414675 TRAPPC3LQ5T215 181 aa18.01■□□□□ 0.47
LRCH3-202ENST00000414675 ZSWIM5Q9P217 1185 aa18.01■□□□□ 0.47
LRCH3-202ENST00000414675 ORC3Q9UBD5 711 aaPredicted RBP18.01■□□□□ 0.47
LRCH3-202ENST00000414675 ESPNB1AK53 854 aa18■□□□□ 0.47
LRCH3-202ENST00000414675 KDM4AO75164 1064 aa18■□□□□ 0.47
LRCH3-202ENST00000414675 GNAT2P19087 354 aa18■□□□□ 0.47
LRCH3-202ENST00000414675 CLCN1P35523 988 aa18■□□□□ 0.47
LRCH3-202ENST00000414675 NFIXQ14938 502 aa18■□□□□ 0.47
LRCH3-202ENST00000414675 AKNAD1Q5T1N1 836 aa18■□□□□ 0.47
LRCH3-202ENST00000414675 APOA5Q6Q788 366 aa18■□□□□ 0.47
LRCH3-202ENST00000414675 VPS37DQ86XT2 251 aa18■□□□□ 0.47
LRCH3-202ENST00000414675 SDR42E1Q8WUS8 393 aa18■□□□□ 0.47
LRCH3-202ENST00000414675 CHMP4CQ96CF2 233 aa18■□□□□ 0.47
LRCH3-202ENST00000414675 LY9Q9HBG7 655 aa18■□□□□ 0.47
LRCH3-202ENST00000414675 TFCP2L1Q9NZI6 479 aa18■□□□□ 0.47
LRCH3-202ENST00000414675 SMIM22K7EJ46 135 aa18■□□□□ 0.47
LRCH3-202ENST00000414675 DHX16O60231 1041 aaKnown RBP18■□□□□ 0.47
LRCH3-202ENST00000414675 STK11IPQ8N1F8 1099 aa18■□□□□ 0.47
LRCH3-202ENST00000414675 TMEM87BQ96K49 555 aa18■□□□□ 0.47
LRCH3-202ENST00000414675 USP28Q96RU2 1077 aa18■□□□□ 0.47
LRCH3-202ENST00000414675 CPLX1O14810 134 aa17.99■□□□□ 0.47
LRCH3-202ENST00000414675 CDC27P30260 824 aa17.99■□□□□ 0.47
LRCH3-202ENST00000414675 RIOK1Q9BRS2 568 aaKnown RBP17.99■□□□□ 0.47
LRCH3-202ENST00000414675 BCL11BQ9C0K0 894 aaPredicted RBP17.99■□□□□ 0.47
LRCH3-202ENST00000414675 BAZ2AQ9UIF9 1905 aaKnown RBP17.99■□□□□ 0.47
LRCH3-202ENST00000414675 DYNLL1P63167 89 aaKnown RBP17.98■□□□□ 0.47
LRCH3-202ENST00000414675 TMEM67Q5HYA8 995 aa17.98■□□□□ 0.47
LRCH3-202ENST00000414675 TXNRD3Q86VQ6 643 aa17.98■□□□□ 0.47
LRCH3-202ENST00000414675 MYL10Q9BUA6 226 aa17.98■□□□□ 0.47
LRCH3-202ENST00000414675 NACAP1Q9BZK3 213 aa17.98■□□□□ 0.47
LRCH3-202ENST00000414675 DACT1Q9NYF0 836 aa17.98■□□□□ 0.47
LRCH3-202ENST00000414675 CFAP45Q9UL16 551 aa17.98■□□□□ 0.47
LRCH3-202ENST00000414675 UBR3Q6ZT12 1888 aa17.98■□□□□ 0.47
LRCH3-202ENST00000414675 ECM29Q5VYK3 1845 aa17.98■□□□□ 0.47
LRCH3-202ENST00000414675 MAGEB6P1A0A0J9YX57 407 aa17.98■□□□□ 0.47
LRCH3-202ENST00000414675 GOLGA6L4A6NEF3 574 aa17.98■□□□□ 0.47
LRCH3-202ENST00000414675 METAP2P50579 478 aaKnown RBP eCLIP17.98■□□□□ 0.47
LRCH3-202ENST00000414675 MICU3Q86XE3 530 aa17.98■□□□□ 0.47
LRCH3-202ENST00000414675 CCDC144CPQ8IYA2 1237 aa17.98■□□□□ 0.47
LRCH3-202ENST00000414675 STAG1Q8WVM7 1258 aa17.98■□□□□ 0.47
LRCH3-202ENST00000414675 C8orf76Q96K31 380 aa17.98■□□□□ 0.47
LRCH3-202ENST00000414675 CAMK4Q16566 473 aa17.97■□□□□ 0.47
LRCH3-202ENST00000414675 RRP12Q5JTH9 1297 aaKnown RBP17.97■□□□□ 0.47
LRCH3-202ENST00000414675 MFSD6Q6ZSS7 791 aa17.97■□□□□ 0.47
LRCH3-202ENST00000414675 SGMS1Q86VZ5 419 aa17.97■□□□□ 0.47
LRCH3-202ENST00000414675 AIFM3Q96NN9 605 aa17.97■□□□□ 0.47
LRCH3-202ENST00000414675 FAM217BQ9NTX9 383 aaPredicted RBP17.97■□□□□ 0.47
LRCH3-202ENST00000414675 RCOR1Q9UKL0 485 aa17.97■□□□□ 0.47
LRCH3-202ENST00000414675 NR1I2O75469 434 aa17.97■□□□□ 0.47
LRCH3-202ENST00000414675 FBXO18Q8NFZ0 1043 aa17.97■□□□□ 0.47
LRCH3-202ENST00000414675 ANKRD2Q9GZV1 360 aa17.97■□□□□ 0.47
LRCH3-202ENST00000414675 IRS2Q9Y4H2 1338 aa17.96■□□□□ 0.47
LRCH3-202ENST00000414675 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.96■□□□□ 0.47
LRCH3-202ENST00000414675 IFIT3O14879 490 aaKnown RBP17.96■□□□□ 0.47
LRCH3-202ENST00000414675 NPHP1O15259 732 aa17.96■□□□□ 0.47
LRCH3-202ENST00000414675 BICD2Q8TD16 824 aa17.96■□□□□ 0.47
LRCH3-202ENST00000414675 ZKSCAN3Q9BRR0 538 aa17.96■□□□□ 0.47
LRCH3-202ENST00000414675 NUP62CLQ9H1M0 184 aa17.96■□□□□ 0.47
LRCH3-202ENST00000414675 CNNM2Q9H8M5 875 aa17.96■□□□□ 0.47
LRCH3-202ENST00000414675 ZBTB43O43298 467 aa17.96■□□□□ 0.47
LRCH3-202ENST00000414675 HIBADHP31937 336 aaKnown RBP17.96■□□□□ 0.47
LRCH3-202ENST00000414675 PPARAQ07869 468 aa17.96■□□□□ 0.47
LRCH3-202ENST00000414675 NFXL1Q6ZNB6 911 aa17.96■□□□□ 0.47
LRCH3-202ENST00000414675 PHKBQ93100 1093 aa17.96■□□□□ 0.47
LRCH3-202ENST00000414675 KRT23Q9C075 422 aa17.96■□□□□ 0.47
LRCH3-202ENST00000414675 BRWD3Q6RI45 1802 aa17.95■□□□□ 0.46
LRCH3-202ENST00000414675 KIF28PB7ZC32 967 aa17.95■□□□□ 0.46
LRCH3-202ENST00000414675 LIFRP42702 1097 aa17.95■□□□□ 0.46
LRCH3-202ENST00000414675 NTRK3Q16288 839 aa17.95■□□□□ 0.46
LRCH3-202ENST00000414675 TOMM22Q9NS69 142 aa17.95■□□□□ 0.46
LRCH3-202ENST00000414675 MINDY4BA8MYZ0 360 aa17.95■□□□□ 0.46
LRCH3-202ENST00000414675 SEMA3EO15041 775 aa17.95■□□□□ 0.46
LRCH3-202ENST00000414675 RANBP6O60518 1105 aaKnown RBP17.95■□□□□ 0.46
LRCH3-202ENST00000414675 NSUN4Q96CB9 384 aaKnown RBP17.95■□□□□ 0.46
LRCH3-202ENST00000414675 JAG2Q9Y219 1238 aa17.95■□□□□ 0.46
LRCH3-202ENST00000414675 MYH2Q9UKX2 1941 aa17.94■□□□□ 0.46
LRCH3-202ENST00000414675 CYP2D7A0A087X1C5 515 aa17.94■□□□□ 0.46
LRCH3-202ENST00000414675 GOLGA8AA7E2F4 631 aa17.94■□□□□ 0.46
LRCH3-202ENST00000414675 CHAF1AQ13111 956 aaPredicted RBP17.94■□□□□ 0.46
LRCH3-202ENST00000414675 CNBD1Q8NA66 436 aa17.94■□□□□ 0.46
LRCH3-202ENST00000414675 ZNF396Q96N95 335 aaPredicted RBP17.94■□□□□ 0.46
LRCH3-202ENST00000414675 CLSTN2Q9H4D0 955 aa17.94■□□□□ 0.46
LRCH3-202ENST00000414675 UBE2Q2LH0YL09 131 aa17.93■□□□□ 0.46
LRCH3-202ENST00000414675 POLR3DP05423 398 aaPredicted RBP17.93■□□□□ 0.46
LRCH3-202ENST00000414675 MECOMQ03112 1051 aa17.93■□□□□ 0.46
LRCH3-202ENST00000414675 MAP3K11Q16584 847 aa17.93■□□□□ 0.46
LRCH3-202ENST00000414675 PRR5LQ6MZQ0 368 aa17.93■□□□□ 0.46
LRCH3-202ENST00000414675 CKAP2LQ8IYA6 745 aa17.93■□□□□ 0.46
LRCH3-202ENST00000414675 DDX19AQ9NUU7 478 aaKnown RBP17.93■□□□□ 0.46
LRCH3-202ENST00000414675 PRDX5P30044 214 aa17.93■□□□□ 0.46
LRCH3-202ENST00000414675 GRAPQ13588 217 aa17.93■□□□□ 0.46
LRCH3-202ENST00000414675 ATL3Q6DD88 541 aa17.93■□□□□ 0.46
LRCH3-202ENST00000414675 GRAPLQ8TC17 118 aaPredicted RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms