RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 DTNBO60941 627 aa8.6□□□□□ -1.03
VTI1A-201ENST00000393077 CCZ1BP86790 482 aa8.6□□□□□ -1.03
VTI1A-201ENST00000393077 CCZ1P86791 482 aaPredicted RBP8.6□□□□□ -1.03
VTI1A-201ENST00000393077 E4F1Q66K89 784 aaPredicted RBP8.6□□□□□ -1.03
VTI1A-201ENST00000393077 RCSD1Q6JBY9 416 aa8.6□□□□□ -1.03
VTI1A-201ENST00000393077 HIBCHQ6NVY1 386 aaPredicted RBP8.6□□□□□ -1.03
VTI1A-201ENST00000393077 HOMER3Q9NSC5 361 aa8.6□□□□□ -1.03
VTI1A-201ENST00000393077 CDC23Q9UJX2 597 aa8.6□□□□□ -1.03
VTI1A-201ENST00000393077 NR1I2O75469 434 aa8.6□□□□□ -1.03
VTI1A-201ENST00000393077 CCDC92Q53HC0 331 aaPredicted RBP8.6□□□□□ -1.03
VTI1A-201ENST00000393077 SH2D4BQ5SQS7 431 aa8.6□□□□□ -1.03
VTI1A-201ENST00000393077 HDGFL1Q5TGJ6 251 aa8.6□□□□□ -1.03
VTI1A-201ENST00000393077 KDM4CQ9H3R0 1056 aa8.6□□□□□ -1.03
VTI1A-201ENST00000393077 MCM8Q9UJA3 840 aa8.6□□□□□ -1.03
VTI1A-201ENST00000393077 MATR3P43243 847 aaKnown RBP eCLIP8.6□□□□□ -1.032e-6■■■■□ 24.8
VTI1A-201ENST00000393077 FANCCQ00597 558 aa8.6□□□□□ -1.03
VTI1A-201ENST00000393077 BLOC1S2Q6QNY1 142 aa8.6□□□□□ -1.03
VTI1A-201ENST00000393077 SARM1Q6SZW1 724 aa8.6□□□□□ -1.03
VTI1A-201ENST00000393077 SND1Q7KZF4 910 aaKnown RBP eCLIP8.6□□□□□ -1.03
VTI1A-201ENST00000393077 TRIM42Q8IWZ5 723 aa8.6□□□□□ -1.03
VTI1A-201ENST00000393077 FBF1Q8TES7 1133 aa8.6□□□□□ -1.03
VTI1A-201ENST00000393077 LMBR1Q8WVP7 490 aa8.6□□□□□ -1.03
VTI1A-201ENST00000393077 NAPGQ99747 312 aaPredicted RBP8.6□□□□□ -1.03
VTI1A-201ENST00000393077 PPANQ9NQ55 473 aaKnown RBP8.6□□□□□ -1.03
VTI1A-201ENST00000393077 RGL1Q9NZL6 768 aa8.6□□□□□ -1.03
VTI1A-201ENST00000393077 PIK3C2GO75747 1445 aa8.6□□□□□ -1.03
VTI1A-201ENST00000393077 SHROOM2Q13796 1616 aa8.59□□□□□ -1.03
VTI1A-201ENST00000393077 GOLGA8KD6RF30 607 aa8.59□□□□□ -1.03
VTI1A-201ENST00000393077 PPFIA3O75145 1194 aa8.59□□□□□ -1.03
VTI1A-201ENST00000393077 HSP90AA4PQ58FG1 418 aa8.59□□□□□ -1.03
VTI1A-201ENST00000393077 CFAP58Q5T655 872 aa8.59□□□□□ -1.03
VTI1A-201ENST00000393077 ZNF483Q8TF39 744 aaPredicted RBP8.59□□□□□ -1.03
VTI1A-201ENST00000393077 SIL1Q9H173 461 aa8.59□□□□□ -1.03
VTI1A-201ENST00000393077 TBX22Q9Y458 520 aa8.59□□□□□ -1.03
VTI1A-201ENST00000393077 HECW2Q9P2P5 1572 aa8.59□□□□□ -1.03
VTI1A-201ENST00000393077 HPDP32754 393 aaPredicted RBP8.59□□□□□ -1.03
VTI1A-201ENST00000393077 LEO1Q8WVC0 666 aaPredicted RBP8.59□□□□□ -1.03
VTI1A-201ENST00000393077 HOOK2Q96ED9 719 aa8.59□□□□□ -1.03
VTI1A-201ENST00000393077 CAPZA3Q96KX2 299 aa8.59□□□□□ -1.03
VTI1A-201ENST00000393077 A1CFQ9NQ94 594 aaKnown RBP8.59□□□□□ -1.03
VTI1A-201ENST00000393077 PRDM11Q9NQV5 511 aa8.59□□□□□ -1.03
VTI1A-201ENST00000393077 PAPOLBQ9NRJ5 636 aaKnown RBP8.59□□□□□ -1.03
VTI1A-201ENST00000393077 NOP53Q9NZM5 478 aaKnown RBP8.59□□□□□ -1.03
VTI1A-201ENST00000393077 ARAP3Q8WWN8 1544 aa8.59□□□□□ -1.03
VTI1A-201ENST00000393077 METP08581 1390 aa8.59□□□□□ -1.03
VTI1A-201ENST00000393077 TMEM2Q9UHN6 1383 aa8.59□□□□□ -1.03
VTI1A-201ENST00000393077 PAPOLAP51003 745 aaKnown RBP8.59□□□□□ -1.03
VTI1A-201ENST00000393077 IRAK1P51617 712 aa8.59□□□□□ -1.03
VTI1A-201ENST00000393077 ATP11AP98196 1134 aa8.59□□□□□ -1.03
VTI1A-201ENST00000393077 AMOTQ4VCS5 1084 aa8.59□□□□□ -1.03
VTI1A-201ENST00000393077 TSHZ3Q63HK5 1081 aa8.59□□□□□ -1.03
VTI1A-201ENST00000393077 C3orf20Q8ND61 904 aa8.59□□□□□ -1.03
VTI1A-201ENST00000393077 FAM167BQ9BTA0 163 aa8.59□□□□□ -1.03
VTI1A-201ENST00000393077 KAT14Q9H8E8 782 aa8.59□□□□□ -1.03
VTI1A-201ENST00000393077 ECEL1O95672 775 aa8.58□□□□□ -1.04
VTI1A-201ENST00000393077 DYNC1I2Q13409 638 aaKnown RBP8.58□□□□□ -1.04
VTI1A-201ENST00000393077 THEMIS2Q5TEJ8 643 aa8.58□□□□□ -1.04
VTI1A-201ENST00000393077 GIGYF2Q6Y7W6 1299 aaKnown RBP8.58□□□□□ -1.04
VTI1A-201ENST00000393077 ARHGAP22Q7Z5H3 698 aa8.58□□□□□ -1.04
VTI1A-201ENST00000393077 CCDC170Q8IYT3 715 aa8.58□□□□□ -1.04
VTI1A-201ENST00000393077 BICD1Q96G01 975 aa8.58□□□□□ -1.04
VTI1A-201ENST00000393077 PCMTD1Q96MG8 357 aaPredicted RBP8.58□□□□□ -1.04
VTI1A-201ENST00000393077 SOS1Q07889 1333 aaPredicted RBP8.58□□□□□ -1.04
VTI1A-201ENST00000393077 CETN3O15182 167 aa8.58□□□□□ -1.04
VTI1A-201ENST00000393077 EIF4A2Q14240 407 aaKnown RBP8.58□□□□□ -1.04
VTI1A-201ENST00000393077 MAP7D1Q3KQU3 841 aa8.58□□□□□ -1.04
VTI1A-201ENST00000393077 CACNA2D3Q8IZS8 1091 aa8.58□□□□□ -1.04
VTI1A-201ENST00000393077 SYCP3Q8IZU3 236 aa8.58□□□□□ -1.04
VTI1A-201ENST00000393077 NFATC2IPQ8NCF5 419 aa8.58□□□□□ -1.04
VTI1A-201ENST00000393077 OTUD7AQ8TE49 926 aaPredicted RBP8.58□□□□□ -1.04
VTI1A-201ENST00000393077 KAT2BQ92831 832 aa8.58□□□□□ -1.04
VTI1A-201ENST00000393077 DCTPP1Q9H773 170 aa8.58□□□□□ -1.04
VTI1A-201ENST00000393077 JADE2Q9NQC1 790 aa8.58□□□□□ -1.04
VTI1A-201ENST00000393077 ERVK-7P63135 1459 aa8.58□□□□□ -1.04
VTI1A-201ENST00000393077 CROCC2H7BZ55 1655 aa8.58□□□□□ -1.04
VTI1A-201ENST00000393077 IQGAP3Q86VI3 1631 aa8.58□□□□□ -1.04
VTI1A-201ENST00000393077 RAB11FIP3O75154 756 aa8.58□□□□□ -1.04
VTI1A-201ENST00000393077 PDCLQ13371 301 aa8.58□□□□□ -1.04
VTI1A-201ENST00000393077 MYSM1Q5VVJ2 828 aa8.58□□□□□ -1.04
VTI1A-201ENST00000393077 PRPF40BQ6NWY9 871 aaKnown RBP8.58□□□□□ -1.04
VTI1A-201ENST00000393077 C11orf57Q6ZUT1 292 aaPredicted RBP8.58□□□□□ -1.04
VTI1A-201ENST00000393077 AMOTL1Q8IY63 956 aa8.58□□□□□ -1.04
VTI1A-201ENST00000393077 CCDC63Q8NA47 563 aa8.58□□□□□ -1.04
VTI1A-201ENST00000393077 DTNBP1Q96EV8 351 aa8.58□□□□□ -1.04
VTI1A-201ENST00000393077 VCX3BQ9H321 246 aa8.58□□□□□ -1.04
VTI1A-201ENST00000393077 VCX3AQ9NNX9 186 aa8.58□□□□□ -1.04
VTI1A-201ENST00000393077 DACH1Q9UI36 760 aa8.58□□□□□ -1.04
VTI1A-201ENST00000393077 MTMR6Q9Y217 621 aa8.58□□□□□ -1.04
VTI1A-201ENST00000393077 ABCC3O15438 1527 aa8.57□□□□□ -1.04
VTI1A-201ENST00000393077 GNAT3A8MTJ3 354 aa8.57□□□□□ -1.04
VTI1A-201ENST00000393077 SMTNP53814 917 aa8.57□□□□□ -1.04
VTI1A-201ENST00000393077 PDE1AP54750 535 aa8.57□□□□□ -1.04
VTI1A-201ENST00000393077 PPARDQ03181 441 aa8.57□□□□□ -1.04
VTI1A-201ENST00000393077 CCDC6Q16204 474 aa8.57□□□□□ -1.04
VTI1A-201ENST00000393077 RASIP1Q5U651 963 aa8.57□□□□□ -1.04
VTI1A-201ENST00000393077 FCHSD1Q86WN1 690 aa8.57□□□□□ -1.04
VTI1A-201ENST00000393077 NSMCE1Q8WV22 266 aa8.57□□□□□ -1.04
VTI1A-201ENST00000393077 DESI2Q9BSY9 194 aa8.57□□□□□ -1.04
VTI1A-201ENST00000393077 ATP6V0A4Q9HBG4 840 aa8.57□□□□□ -1.04
VTI1A-201ENST00000393077 SLC40A1Q9NP59 571 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms