RNA–Protein interactions for RNA: ENST00000382203.5

SMARCA2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCA2, Length 5,867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-209ENST00000382203 ZBBXA8MT70 800 aa13.77□□□□□ -0.2
SMARCA2-209ENST00000382203 PLCB1Q9NQ66 1216 aa13.77□□□□□ -0.2
SMARCA2-209ENST00000382203 SERPINB6P35237 376 aa13.77□□□□□ -0.2
SMARCA2-209ENST00000382203 RUSC2Q8N2Y8 1516 aa13.77□□□□□ -0.2
SMARCA2-209ENST00000382203 ATP6V1E1P36543 226 aa13.77□□□□□ -0.21
SMARCA2-209ENST00000382203 NOP14P78316 857 aaKnown RBP13.77□□□□□ -0.21
SMARCA2-209ENST00000382203 ARID5AQ03989 594 aa13.77□□□□□ -0.21
SMARCA2-209ENST00000382203 DYNC1I2Q13409 638 aaKnown RBP13.77□□□□□ -0.21
SMARCA2-209ENST00000382203 CEP19Q96LK0 163 aa13.77□□□□□ -0.21
SMARCA2-209ENST00000382203 LRRC9Q6ZRR7 1453 aa13.77□□□□□ -0.21
SMARCA2-209ENST00000382203 CUL4BQ13620 913 aa13.77□□□□□ -0.21
SMARCA2-209ENST00000382203 UTP14CQ5TAP6 766 aaKnown RBP13.77□□□□□ -0.21
SMARCA2-209ENST00000382203 CCDC82Q8N4S0 544 aa13.77□□□□□ -0.21
SMARCA2-209ENST00000382203 DNAJC25Q9H1X3 360 aa13.77□□□□□ -0.21
SMARCA2-209ENST00000382203 RILPL1Q5EBL4 403 aa13.76□□□□□ -0.21
SMARCA2-209ENST00000382203 TMEM67Q5HYA8 995 aa13.76□□□□□ -0.21
SMARCA2-209ENST00000382203 SMARCA5O60264 1052 aaPredicted RBP13.76□□□□□ -0.21
SMARCA2-209ENST00000382203 SYKP43405 635 aa13.76□□□□□ -0.21
SMARCA2-209ENST00000382203 SEL1L2Q5TEA6 688 aa13.76□□□□□ -0.21
SMARCA2-209ENST00000382203 CCDC138Q96M89 665 aa13.76□□□□□ -0.21
SMARCA2-209ENST00000382203 SH3GL2Q99962 352 aa13.76□□□□□ -0.21
SMARCA2-209ENST00000382203 CARD6Q9BX69 1037 aa13.76□□□□□ -0.21
SMARCA2-209ENST00000382203 RRP15Q9Y3B9 282 aaKnown RBP13.76□□□□□ -0.21
SMARCA2-209ENST00000382203 NBPF6Q5VWK0 638 aa13.76□□□□□ -0.21
SMARCA2-209ENST00000382203 BCAS4Q8TDM0 211 aa13.76□□□□□ -0.21
SMARCA2-209ENST00000382203 NBPF4Q96M43 638 aa13.76□□□□□ -0.21
SMARCA2-209ENST00000382203 POLE3Q9NRF9 147 aa13.76□□□□□ -0.21
SMARCA2-209ENST00000382203 POTEB3A0JP26 581 aa13.76□□□□□ -0.21
SMARCA2-209ENST00000382203 GJB2P29033 226 aa13.76□□□□□ -0.21
SMARCA2-209ENST00000382203 POTEBQ6S5H4 581 aa13.76□□□□□ -0.21
SMARCA2-209ENST00000382203 EVI5LQ96CN4 794 aa13.76□□□□□ -0.21
SMARCA2-209ENST00000382203 DMTNQ08495 405 aa13.75□□□□□ -0.21
SMARCA2-209ENST00000382203 ALDH1L2Q3SY69 923 aa13.75□□□□□ -0.21
SMARCA2-209ENST00000382203 EFCAB13Q8IY85 973 aa13.75□□□□□ -0.21
SMARCA2-209ENST00000382203 AKNAQ7Z591 1439 aa13.75□□□□□ -0.21
SMARCA2-209ENST00000382203 IARSP41252 1262 aaKnown RBP13.75□□□□□ -0.21
SMARCA2-209ENST00000382203 ITIH3Q06033 890 aa13.75□□□□□ -0.21
SMARCA2-209ENST00000382203 SH3GL3Q99963 347 aa13.75□□□□□ -0.21
SMARCA2-209ENST00000382203 CSRNP2Q9H175 543 aa13.75□□□□□ -0.21
SMARCA2-209ENST00000382203 KIF1CO43896 1103 aaKnown RBP13.75□□□□□ -0.21
SMARCA2-209ENST00000382203 TRAF1Q13077 416 aa13.75□□□□□ -0.21
SMARCA2-209ENST00000382203 FLOT2Q14254 428 aa13.75□□□□□ -0.21
SMARCA2-209ENST00000382203 C16orf87Q6PH81 154 aa13.75□□□□□ -0.21
SMARCA2-209ENST00000382203 SPZ1Q9BXG8 430 aa13.75□□□□□ -0.21
SMARCA2-209ENST00000382203 KRT3P12035 628 aa13.75□□□□□ -0.21
SMARCA2-209ENST00000382203 BLVRAP53004 296 aa13.75□□□□□ -0.21
SMARCA2-209ENST00000382203 TAF11Q15544 211 aa13.75□□□□□ -0.21
SMARCA2-209ENST00000382203 CDC5LQ99459 802 aaKnown RBP13.75□□□□□ -0.21
SMARCA2-209ENST00000382203 NAPGQ99747 312 aaPredicted RBP13.75□□□□□ -0.21
SMARCA2-209ENST00000382203 VAT1LQ9HCJ6 419 aa13.75□□□□□ -0.21
SMARCA2-209ENST00000382203 UTP11Q9Y3A2 253 aaKnown RBP13.75□□□□□ -0.21
SMARCA2-209ENST00000382203 FGD5Q6ZNL6 1462 aa13.75□□□□□ -0.21
SMARCA2-209ENST00000382203 TSPY2A6NKD2 308 aa13.75□□□□□ -0.21
SMARCA2-209ENST00000382203 C6orf229H3BNL8 230 aa13.75□□□□□ -0.21
SMARCA2-209ENST00000382203 PTCD1O75127 700 aaKnown RBP13.75□□□□□ -0.21
SMARCA2-209ENST00000382203 SLC4A1P02730 911 aa13.75□□□□□ -0.21
SMARCA2-209ENST00000382203 LMOD1P29536 600 aaPredicted RBP13.75□□□□□ -0.21
SMARCA2-209ENST00000382203 STX2P32856 288 aa13.75□□□□□ -0.21
SMARCA2-209ENST00000382203 ANKRD20A4Q4UJ75 823 aa13.75□□□□□ -0.21
SMARCA2-209ENST00000382203 ANKRD20A8PQ5CZ79 823 aa13.75□□□□□ -0.21
SMARCA2-209ENST00000382203 ANKRD20A2Q5SQ80 823 aa13.75□□□□□ -0.21
SMARCA2-209ENST00000382203 ANKRD20A1Q5TYW2 823 aa13.75□□□□□ -0.21
SMARCA2-209ENST00000382203 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.75□□□□□ -0.21
SMARCA2-209ENST00000382203 BAG5Q9UL15 447 aa13.75□□□□□ -0.21
SMARCA2-209ENST00000382203 MRPS15P82914 257 aaKnown RBP13.74□□□□□ -0.21
SMARCA2-209ENST00000382203 RASA3Q14644 834 aa13.74□□□□□ -0.21
SMARCA2-209ENST00000382203 CENPKQ9BS16 269 aa13.74□□□□□ -0.21
SMARCA2-209ENST00000382203 CACYBPQ9HB71 228 aaKnown RBP13.74□□□□□ -0.21
SMARCA2-209ENST00000382203 ZNF219Q9P2Y4 722 aaPredicted RBP13.74□□□□□ -0.21
SMARCA2-209ENST00000382203 PSMD7P51665 324 aa13.74□□□□□ -0.21
SMARCA2-209ENST00000382203 FLCNQ8NFG4 579 aa13.74□□□□□ -0.21
SMARCA2-209ENST00000382203 HDAC9Q9UKV0 1011 aa13.74□□□□□ -0.21
SMARCA2-209ENST00000382203 COPG1Q9Y678 874 aaKnown RBP13.74□□□□□ -0.21
SMARCA2-209ENST00000382203 DAPK1P53355 1430 aa13.74□□□□□ -0.21
SMARCA2-209ENST00000382203 CASKIN1Q8WXD9 1431 aa13.74□□□□□ -0.21
SMARCA2-209ENST00000382203 KIAA1107Q9UPP5 1409 aa13.74□□□□□ -0.21
SMARCA2-209ENST00000382203 TMPOP42166 694 aaKnown RBP13.74□□□□□ -0.21
SMARCA2-209ENST00000382203 CCT2P78371 535 aaKnown RBP13.74□□□□□ -0.21
SMARCA2-209ENST00000382203 CDR2Q01850 454 aa13.74□□□□□ -0.21
SMARCA2-209ENST00000382203 MCTP2Q6DN12 878 aa13.74□□□□□ -0.21
SMARCA2-209ENST00000382203 MFSD6Q6ZSS7 791 aa13.74□□□□□ -0.21
SMARCA2-209ENST00000382203 DIABLOQ9NR28 239 aa13.74□□□□□ -0.21
SMARCA2-209ENST00000382203 DDX28Q9NUL7 540 aaKnown RBP13.74□□□□□ -0.21
SMARCA2-209ENST00000382203 TRPA1O75762 1119 aa13.74□□□□□ -0.21
SMARCA2-209ENST00000382203 SKIP12755 728 aa13.74□□□□□ -0.21
SMARCA2-209ENST00000382203 KRT15P19012 456 aa13.74□□□□□ -0.21
SMARCA2-209ENST00000382203 AFAP1Q8N556 730 aa13.74□□□□□ -0.21
SMARCA2-209ENST00000382203 CCDC8Q9H0W5 538 aaPredicted RBP13.74□□□□□ -0.21
SMARCA2-209ENST00000382203 METAP2P50579 478 aaKnown RBP eCLIP13.74□□□□□ -0.21
SMARCA2-209ENST00000382203 ST5P78524 1137 aa13.74□□□□□ -0.21
SMARCA2-209ENST00000382203 KRT71Q3SY84 523 aa13.74□□□□□ -0.21
SMARCA2-209ENST00000382203 PRIM1P49642 420 aaKnown RBP13.73□□□□□ -0.21
SMARCA2-209ENST00000382203 SND1Q7KZF4 910 aaKnown RBP eCLIP13.73□□□□□ -0.21
SMARCA2-209ENST00000382203 RRAGDQ9NQL2 400 aaPredicted RBP13.73□□□□□ -0.21
SMARCA2-209ENST00000382203 NSD3Q9BZ95 1437 aa13.73□□□□□ -0.21
SMARCA2-209ENST00000382203 PAK2Q13177 524 aa13.73□□□□□ -0.21
SMARCA2-209ENST00000382203 MTMR3Q13615 1198 aa13.73□□□□□ -0.21
SMARCA2-209ENST00000382203 MIS18AQ9NYP9 233 aa13.73□□□□□ -0.21
SMARCA2-209ENST00000382203 PSMA7O14818 248 aa13.73□□□□□ -0.21
SMARCA2-209ENST00000382203 KRT75O95678 551 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms