RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 SRRTQ9BXP5 876 aaKnown RBP18.54■□□□□ 0.56
BRD3-201ENST00000303407 CBX8Q9HC52 389 aa18.54■□□□□ 0.56
BRD3-201ENST00000303407 CTNND2Q9UQB3 1225 aa18.54■□□□□ 0.56
BRD3-201ENST00000303407 GSTTP1A0A1W2PQM5 241 aa18.53■□□□□ 0.56
BRD3-201ENST00000303407 IBSPP21815 317 aaPredicted RBP18.53■□□□□ 0.56
BRD3-201ENST00000303407 KRT222Q8N1A0 295 aa18.53■□□□□ 0.56
BRD3-201ENST00000303407 HDAC9Q9UKV0 1011 aa18.53■□□□□ 0.56
BRD3-201ENST00000303407 CEP112Q8N8E3 955 aa18.53■□□□□ 0.56
BRD3-201ENST00000303407 RRAGDQ9NQL2 400 aaPredicted RBP18.53■□□□□ 0.56
BRD3-201ENST00000303407 MROH5Q6ZUA9 1318 aa18.53■□□□□ 0.56
BRD3-201ENST00000303407 ZNF532Q9HCE3 1301 aa18.53■□□□□ 0.56
BRD3-201ENST00000303407 NLRP1Q9C000 1473 aa18.53■□□□□ 0.56
BRD3-201ENST00000303407 A0A0D9SFI3 127 aa18.53■□□□□ 0.56
BRD3-201ENST00000303407 MAATS1Q7Z4T9 603 aa18.53■□□□□ 0.56
BRD3-201ENST00000303407 TRAF1Q13077 416 aa18.53■□□□□ 0.56
BRD3-201ENST00000303407 DHX37Q8IY37 1157 aaKnown RBP18.53■□□□□ 0.56
BRD3-201ENST00000303407 ZC3H12CQ9C0D7 883 aaKnown RBP18.53■□□□□ 0.56
BRD3-201ENST00000303407 CCDC87Q9NVE4 849 aa18.53■□□□□ 0.56
BRD3-201ENST00000303407 KCNH3Q9ULD8 1083 aa18.53■□□□□ 0.56
BRD3-201ENST00000303407 GCOM1H8Y6P7 765 aaPredicted RBP18.52■□□□□ 0.56
BRD3-201ENST00000303407 MYZAPP0CAP1 466 aa18.52■□□□□ 0.56
BRD3-201ENST00000303407 KRT83P78385 493 aa18.52■□□□□ 0.56
BRD3-201ENST00000303407 BICD1Q96G01 975 aa18.52■□□□□ 0.56
BRD3-201ENST00000303407 MYL10Q9BUA6 226 aa18.52■□□□□ 0.56
BRD3-201ENST00000303407 CLTCL1P53675 1640 aa18.52■□□□□ 0.56
BRD3-201ENST00000303407 ERVV-2B6SEH9 535 aa18.52■□□□□ 0.56
BRD3-201ENST00000303407 CCDC172P0C7W6 258 aa18.52■□□□□ 0.56
BRD3-201ENST00000303407 LZTFL1Q9NQ48 299 aa18.52■□□□□ 0.56
BRD3-201ENST00000303407 MAP2K1Q02750 393 aaPredicted RBP18.52■□□□□ 0.56
BRD3-201ENST00000303407 TAOK3Q9H2K8 898 aa18.52■□□□□ 0.56
BRD3-201ENST00000303407 TRAPPC3LQ5T215 181 aa18.52■□□□□ 0.55
BRD3-201ENST00000303407 LMAN1P49257 510 aa18.52■□□□□ 0.55
BRD3-201ENST00000303407 GOLGA1Q92805 767 aa18.52■□□□□ 0.55
BRD3-201ENST00000303407 BCORL1Q5H9F3 1711 aa18.51■□□□□ 0.55
BRD3-201ENST00000303407 MAP3K4Q9Y6R4 1608 aa18.51■□□□□ 0.55
BRD3-201ENST00000303407 PIK3AP1Q6ZUJ8 805 aa18.51■□□□□ 0.55
BRD3-201ENST00000303407 DNAI2Q9GZS0 605 aa18.51■□□□□ 0.55
BRD3-201ENST00000303407 SPDYE3A6NKU9 549 aa18.51■□□□□ 0.55
BRD3-201ENST00000303407 NEBLO76041 1014 aa18.51■□□□□ 0.55
BRD3-201ENST00000303407 PHKBQ93100 1093 aa18.51■□□□□ 0.55
BRD3-201ENST00000303407 GTF3C6Q969F1 213 aa18.51■□□□□ 0.55
BRD3-201ENST00000303407 EAF2Q96CJ1 260 aaPredicted RBP18.51■□□□□ 0.55
BRD3-201ENST00000303407 ARFGAP3Q9NP61 516 aa18.51■□□□□ 0.55
BRD3-201ENST00000303407 TACC1O75410 805 aa18.51■□□□□ 0.55
BRD3-201ENST00000303407 TMEM63CQ9P1W3 806 aa18.51■□□□□ 0.55
BRD3-201ENST00000303407 HSF2BPO75031 334 aa18.5■□□□□ 0.55
BRD3-201ENST00000303407 ZNF75DP51815 510 aa18.5■□□□□ 0.55
BRD3-201ENST00000303407 CALCOCO1Q9P1Z2 691 aa18.5■□□□□ 0.55
BRD3-201ENST00000303407 V9GY48 417 aaPredicted RBP18.5■□□□□ 0.55
BRD3-201ENST00000303407 USP6P35125 1406 aa18.5■□□□□ 0.55
BRD3-201ENST00000303407 CUTAO60888 179 aa18.5■□□□□ 0.55
BRD3-201ENST00000303407 SPECC1Q5M775 1068 aa18.5■□□□□ 0.55
BRD3-201ENST00000303407 CCDC174Q6PII3 467 aa18.5■□□□□ 0.55
BRD3-201ENST00000303407 TEX11Q8IYF3 940 aa18.5■□□□□ 0.55
BRD3-201ENST00000303407 DCAF8L1A6NGE4 600 aa18.5■□□□□ 0.55
BRD3-201ENST00000303407 DIS3L2Q8IYB7 885 aaKnown RBP18.5■□□□□ 0.55
BRD3-201ENST00000303407 BAG1Q99933 345 aaPredicted RBP18.5■□□□□ 0.55
BRD3-201ENST00000303407 KRT13P13646 458 aa18.49■□□□□ 0.55
BRD3-201ENST00000303407 TCIRG1Q13488 830 aa18.49■□□□□ 0.55
BRD3-201ENST00000303407 LETM2Q2VYF4 491 aa18.49■□□□□ 0.55
BRD3-201ENST00000303407 ZNF569Q5MCW4 686 aa18.49■□□□□ 0.55
BRD3-201ENST00000303407 CNBD1Q8NA66 436 aa18.49■□□□□ 0.55
BRD3-201ENST00000303407 GTPBP4Q9BZE4 634 aaKnown RBP18.49■□□□□ 0.55
BRD3-201ENST00000303407 IGSF1Q8N6C5 1336 aa18.49■□□□□ 0.55
BRD3-201ENST00000303407 UFL1O94874 794 aa18.49■□□□□ 0.55
BRD3-201ENST00000303407 GUCA1BQ9UMX6 200 aa18.49■□□□□ 0.55
BRD3-201ENST00000303407 PARP3Q9Y6F1 533 aa18.49■□□□□ 0.55
BRD3-201ENST00000303407 LMTK3Q96Q04 1460 aa18.49■□□□□ 0.55
BRD3-201ENST00000303407 CROCC2H7BZ55 1655 aa18.49■□□□□ 0.55
BRD3-201ENST00000303407 ROBO2Q9HCK4 1378 aa18.49■□□□□ 0.55
BRD3-201ENST00000303407 ABCC3O15438 1527 aa18.49■□□□□ 0.55
BRD3-201ENST00000303407 KRT86O43790 486 aa18.49■□□□□ 0.55
BRD3-201ENST00000303407 AATFQ9NY61 560 aaKnown RBP eCLIP18.49■□□□□ 0.55
BRD3-201ENST00000303407 AKR1B15C9JRZ8 316 aaPredicted RBP18.49■□□□□ 0.55
BRD3-201ENST00000303407 PRDM1O75626 825 aa18.49■□□□□ 0.55
BRD3-201ENST00000303407 CALRP27797 417 aaKnown RBP18.49■□□□□ 0.55
BRD3-201ENST00000303407 ARID5AQ03989 594 aa18.49■□□□□ 0.55
BRD3-201ENST00000303407 PUF60Q9UHX1 559 aaKnown RBP18.49■□□□□ 0.55
BRD3-201ENST00000303407 CCT6AP40227 531 aaKnown RBP18.49■□□□□ 0.55
BRD3-201ENST00000303407 CTSWP56202 376 aa18.49■□□□□ 0.55
BRD3-201ENST00000303407 NLRP12P59046 1061 aa18.49■□□□□ 0.55
BRD3-201ENST00000303407 RGS12O14924 1447 aa18.48■□□□□ 0.55
BRD3-201ENST00000303407 NEK11Q8NG66 645 aa18.48■□□□□ 0.55
BRD3-201ENST00000303407 ZSWIM6Q9HCJ5 1215 aa18.48■□□□□ 0.55
BRD3-201ENST00000303407 TFCP2L1Q9NZI6 479 aa18.48■□□□□ 0.55
BRD3-201ENST00000303407 CCNL1Q9UK58 526 aaPredicted RBP18.48■□□□□ 0.55
BRD3-201ENST00000303407 ZNF202O95125 648 aa18.48■□□□□ 0.55
BRD3-201ENST00000303407 KIF5AQ12840 1032 aa18.48■□□□□ 0.55
BRD3-201ENST00000303407 KRT40Q6A162 431 aa18.48■□□□□ 0.55
BRD3-201ENST00000303407 CCDC42Q96M95 316 aa18.48■□□□□ 0.55
BRD3-201ENST00000303407 CDK12Q9NYV4 1490 aaPredicted RBP18.48■□□□□ 0.55
BRD3-201ENST00000303407 POLR2DO15514 142 aaKnown RBP18.48■□□□□ 0.55
BRD3-201ENST00000303407 OGFOD1Q8N543 542 aa18.48■□□□□ 0.55
BRD3-201ENST00000303407 FERMT2Q96AC1 680 aa18.48■□□□□ 0.55
BRD3-201ENST00000303407 CTNNA2P26232 953 aa18.48■□□□□ 0.55
BRD3-201ENST00000303407 PKP1Q13835 747 aa18.48■□□□□ 0.55
BRD3-201ENST00000303407 TPCN1Q9ULQ1 816 aa18.48■□□□□ 0.55
BRD3-201ENST00000303407 UNC13BO14795 1591 aa18.48■□□□□ 0.55
BRD3-201ENST00000303407 CNGA4Q8IV77 575 aa18.47■□□□□ 0.55
BRD3-201ENST00000303407 CAPZA3Q96KX2 299 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms