RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 SASH1O94885 1247 aa17.81■□□□□ 0.44
USP43-201ENST00000285199 ZAP70P43403 619 aa17.81■□□□□ 0.44
USP43-201ENST00000285199 FBXO3Q9UK99 471 aa17.81■□□□□ 0.44
USP43-201ENST00000285199 POGZQ7Z3K3 1410 aa17.81■□□□□ 0.44
USP43-201ENST00000285199 BTBD18B2RXH4 712 aa17.81■□□□□ 0.44
USP43-201ENST00000285199 CTDSPL2Q05D32 466 aa17.81■□□□□ 0.44
USP43-201ENST00000285199 ZNF790Q6PG37 636 aa17.81■□□□□ 0.44
USP43-201ENST00000285199 CCDC42Q96M95 316 aa17.81■□□□□ 0.44
USP43-201ENST00000285199 UIMC1Q96RL1 719 aa17.81■□□□□ 0.44
USP43-201ENST00000285199 SAMD9LQ8IVG5 1584 aa17.81■□□□□ 0.44
USP43-201ENST00000285199 NLRP1Q9C000 1473 aa17.81■□□□□ 0.44
USP43-201ENST00000285199 HPDP32754 393 aaPredicted RBP17.81■□□□□ 0.44
USP43-201ENST00000285199 TCERG1LQ5VWI1 586 aa17.81■□□□□ 0.44
USP43-201ENST00000285199 MAGEB6Q8N7X4 407 aa17.81■□□□□ 0.44
USP43-201ENST00000285199 TMEM87AQ8NBN3 555 aa17.81■□□□□ 0.44
USP43-201ENST00000285199 NAPGQ99747 312 aaPredicted RBP17.81■□□□□ 0.44
USP43-201ENST00000285199 TUBB4AP04350 444 aa17.8■□□□□ 0.44
USP43-201ENST00000285199 IGHMBP2P38935 993 aaKnown RBP17.8■□□□□ 0.44
USP43-201ENST00000285199 KIF5AQ12840 1032 aa17.8■□□□□ 0.44
USP43-201ENST00000285199 OTUD6BQ8N6M0 293 aa17.8■□□□□ 0.44
USP43-201ENST00000285199 GOLPH3LQ9H4A5 285 aa17.8■□□□□ 0.44
USP43-201ENST00000285199 TTC21AQ8NDW8 1320 aa17.8■□□□□ 0.44
USP43-201ENST00000285199 SMIM23A6NLE4 172 aa17.8■□□□□ 0.44
USP43-201ENST00000285199 HSF2BPO75031 334 aa17.8■□□□□ 0.44
USP43-201ENST00000285199 MCM3P25205 808 aa17.8■□□□□ 0.44
USP43-201ENST00000285199 MRPS25P82663 173 aaKnown RBP17.8■□□□□ 0.44
USP43-201ENST00000285199 RESTQ13127 1097 aa17.8■□□□□ 0.44
USP43-201ENST00000285199 PRDM4Q9UKN5 801 aa17.8■□□□□ 0.44
USP43-201ENST00000285199 ANGEL1Q9UNK9 670 aaKnown RBP17.8■□□□□ 0.44
USP43-201ENST00000285199 TSPY2A6NKD2 308 aa17.8■□□□□ 0.44
USP43-201ENST00000285199 PFKFB2O60825 505 aa17.8■□□□□ 0.44
USP43-201ENST00000285199 GCP02774 474 aa17.8■□□□□ 0.44
USP43-201ENST00000285199 KCNA6P17658 529 aa17.8■□□□□ 0.44
USP43-201ENST00000285199 POSTNQ15063 836 aa17.8■□□□□ 0.44
USP43-201ENST00000285199 E2F4Q16254 413 aa17.8■□□□□ 0.44
USP43-201ENST00000285199 DYDC1Q8WWB3 177 aa17.8■□□□□ 0.44
USP43-201ENST00000285199 LIG3P49916 1009 aa17.8■□□□□ 0.44
USP43-201ENST00000285199 TOB2Q14106 344 aaPredicted RBP17.8■□□□□ 0.44
USP43-201ENST00000285199 GPR161Q8N6U8 529 aaKnown RBP17.8■□□□□ 0.44
USP43-201ENST00000285199 PARD6BQ9BYG5 372 aa17.8■□□□□ 0.44
USP43-201ENST00000285199 GIGYF1O75420 1035 aaPredicted RBP17.79■□□□□ 0.44
USP43-201ENST00000285199 CYP7A1P22680 504 aa17.79■□□□□ 0.44
USP43-201ENST00000285199 LRRC24Q50LG9 513 aa17.79■□□□□ 0.44
USP43-201ENST00000285199 KRT28Q7Z3Y7 464 aa17.79■□□□□ 0.44
USP43-201ENST00000285199 FAM76AQ8TAV0 307 aa17.79■□□□□ 0.44
USP43-201ENST00000285199 AFAP1L1Q8TED9 768 aa17.79■□□□□ 0.44
USP43-201ENST00000285199 CTAGE1Q96RT6 745 aa17.79■□□□□ 0.44
USP43-201ENST00000285199 ZFYP08048 801 aaPredicted RBP17.79■□□□□ 0.44
USP43-201ENST00000285199 ATP5JP18859 108 aa17.79■□□□□ 0.44
USP43-201ENST00000285199 LONRF2Q1L5Z9 754 aa17.79■□□□□ 0.44
USP43-201ENST00000285199 PI16Q6UXB8 463 aa17.79■□□□□ 0.44
USP43-201ENST00000285199 RCOR1Q9UKL0 485 aa17.79■□□□□ 0.44
USP43-201ENST00000285199 EFCAB8A8MWE9 144 aa17.79■□□□□ 0.44
USP43-201ENST00000285199 HGSO14964 777 aaPredicted RBP17.79■□□□□ 0.44
USP43-201ENST00000285199 KRT86O43790 486 aa17.79■□□□□ 0.44
USP43-201ENST00000285199 CYLC1P35663 651 aaPredicted RBP17.79■□□□□ 0.44
USP43-201ENST00000285199 PTPROQ16827 1216 aa17.79■□□□□ 0.44
USP43-201ENST00000285199 FAN1Q9Y2M0 1017 aa17.79■□□□□ 0.44
USP43-201ENST00000285199 TMEM232C9JQI7 657 aa17.78■□□□□ 0.44
USP43-201ENST00000285199 ERLIN2O94905 339 aa17.78■□□□□ 0.44
USP43-201ENST00000285199 MBD4O95243 580 aa17.78■□□□□ 0.44
USP43-201ENST00000285199 FGAP02671 866 aa17.78■□□□□ 0.44
USP43-201ENST00000285199 TMOD3Q9NYL9 352 aa17.78■□□□□ 0.44
USP43-201ENST00000285199 NDUFAB1O14561 156 aa17.78■□□□□ 0.44
USP43-201ENST00000285199 STARD3NLO95772 234 aa17.78■□□□□ 0.44
USP43-201ENST00000285199 CCDC40Q4G0X9 1142 aa17.78■□□□□ 0.44
USP43-201ENST00000285199 ATL3Q6DD88 541 aa17.78■□□□□ 0.44
USP43-201ENST00000285199 FBXO18Q8NFZ0 1043 aa17.78■□□□□ 0.44
USP43-201ENST00000285199 XAGE2Q96GT9 111 aa17.78■□□□□ 0.44
USP43-201ENST00000285199 METTL22Q9BUU2 404 aaPredicted RBP17.78■□□□□ 0.44
USP43-201ENST00000285199 V9GY48 417 aaPredicted RBP17.78■□□□□ 0.44
USP43-201ENST00000285199 ASIC1P78348 528 aa17.78■□□□□ 0.44
USP43-201ENST00000285199 IFIT1BQ5T764 474 aaKnown RBP17.78■□□□□ 0.44
USP43-201ENST00000285199 NEURL1BA8MQ27 555 aa17.77■□□□□ 0.44
USP43-201ENST00000285199 EYA2O00167 538 aa17.77■□□□□ 0.44
USP43-201ENST00000285199 NEFHP12036 1026 aa17.77■□□□□ 0.44
USP43-201ENST00000285199 SND1Q7KZF4 910 aaKnown RBP eCLIP17.77■□□□□ 0.44
USP43-201ENST00000285199 ANKLE2Q86XL3 938 aa17.77■□□□□ 0.44
USP43-201ENST00000285199 CNGA4Q8IV77 575 aa17.77■□□□□ 0.44
USP43-201ENST00000285199 ALS2CR12Q96Q35 445 aa17.77■□□□□ 0.44
USP43-201ENST00000285199 ARMT1Q9H993 441 aa17.77■□□□□ 0.44
USP43-201ENST00000285199 HELLSQ9NRZ9 838 aa17.77■□□□□ 0.44
USP43-201ENST00000285199 BMP2KQ9NSY1 1161 aaPredicted RBP17.77■□□□□ 0.44
USP43-201ENST00000285199 RPAP1Q9BWH6 1393 aaPredicted RBP17.77■□□□□ 0.44
USP43-201ENST00000285199 CCDC43Q96MW1 224 aaKnown RBP17.77■□□□□ 0.44
USP43-201ENST00000285199 IRX2Q9BZI1 471 aaPredicted RBP17.77■□□□□ 0.44
USP43-201ENST00000285199 TLDC2A0PJX2 215 aa17.77■□□□□ 0.43
USP43-201ENST00000285199 RNF41Q9H4P4 317 aaPredicted RBP17.77■□□□□ 0.43
USP43-201ENST00000285199 NCOA3Q9Y6Q9 1424 aa17.77■□□□□ 0.43
USP43-201ENST00000285199 SLC5A1P13866 664 aa17.76■□□□□ 0.43
USP43-201ENST00000285199 SCLT1Q96NL6 688 aa17.76■□□□□ 0.43
USP43-201ENST00000285199 TCP11L1Q9NUJ3 509 aa17.76■□□□□ 0.43
USP43-201ENST00000285199 VPS54Q9P1Q0 977 aa17.76■□□□□ 0.43
USP43-201ENST00000285199 PLA2G4DQ86XP0 818 aa17.76■□□□□ 0.43
USP43-201ENST00000285199 PUS3Q9BZE2 481 aaKnown RBP17.76■□□□□ 0.43
USP43-201ENST00000285199 SAMSN1Q9NSI8 373 aaKnown RBP17.76■□□□□ 0.43
USP43-201ENST00000285199 GOLGA6CA6NDK9 693 aa17.76■□□□□ 0.43
USP43-201ENST00000285199 GOLGA6DP0CG33 693 aa17.76■□□□□ 0.43
USP43-201ENST00000285199 GOLGA6AQ9NYA3 693 aa17.76■□□□□ 0.43
USP43-201ENST00000285199 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms