RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 NBPF3Q9H094 633 aa15.65■□□□□ 0.1
GABPB1-201ENST00000220429 BTG4Q9NY30 223 aa15.65■□□□□ 0.1
GABPB1-201ENST00000220429 ELF1P32519 619 aa15.65■□□□□ 0.1
GABPB1-201ENST00000220429 A1CFQ9NQ94 594 aaKnown RBP15.65■□□□□ 0.1
GABPB1-201ENST00000220429 ASAP1Q9ULH1 1129 aa15.65■□□□□ 0.1
GABPB1-201ENST00000220429 ATP6V1DQ9Y5K8 247 aa15.65■□□□□ 0.1
GABPB1-201ENST00000220429 TUBB4AP04350 444 aa15.64■□□□□ 0.09
GABPB1-201ENST00000220429 ARID4AP29374 1257 aaPredicted RBP15.64■□□□□ 0.09
GABPB1-201ENST00000220429 JPH2Q9BR39 696 aaPredicted RBP15.64■□□□□ 0.09
GABPB1-201ENST00000220429 NUP62CLQ9H1M0 184 aa15.64■□□□□ 0.09
GABPB1-201ENST00000220429 CHGBP05060 677 aa15.64■□□□□ 0.09
GABPB1-201ENST00000220429 SETQ01105 290 aaPredicted RBP15.64■□□□□ 0.09
GABPB1-201ENST00000220429 JAKMIP3Q5VZ66 844 aa15.64■□□□□ 0.09
GABPB1-201ENST00000220429 FMNL3Q8IVF7 1028 aa15.64■□□□□ 0.09
GABPB1-201ENST00000220429 PIGBQ92521 554 aa15.64■□□□□ 0.09
GABPB1-201ENST00000220429 HAUS7Q99871 368 aa15.64■□□□□ 0.09
GABPB1-201ENST00000220429 ISCA1Q9BUE6 129 aa15.64■□□□□ 0.09
GABPB1-201ENST00000220429 TAF6LQ9Y6J9 622 aa15.64■□□□□ 0.09
GABPB1-201ENST00000220429 TAF5LO75529 589 aa15.63■□□□□ 0.09
GABPB1-201ENST00000220429 PAX7P23759 505 aa15.63■□□□□ 0.09
GABPB1-201ENST00000220429 NEDD9Q14511 834 aa15.63■□□□□ 0.09
GABPB1-201ENST00000220429 CAMK4Q16566 473 aa15.63■□□□□ 0.09
GABPB1-201ENST00000220429 SYTL4Q96C24 671 aaPredicted RBP15.63■□□□□ 0.09
GABPB1-201ENST00000220429 RFX7Q2KHR2 1363 aa15.63■□□□□ 0.09
GABPB1-201ENST00000220429 PPFIA4O75335 1185 aa15.63■□□□□ 0.09
GABPB1-201ENST00000220429 EVCP57679 992 aa15.63■□□□□ 0.09
GABPB1-201ENST00000220429 CCDC83Q8IWF9 413 aa15.63■□□□□ 0.09
GABPB1-201ENST00000220429 DNAJC10Q8IXB1 793 aa15.63■□□□□ 0.09
GABPB1-201ENST00000220429 MRFAP1L1Q96HT8 127 aa15.63■□□□□ 0.09
GABPB1-201ENST00000220429 ZNF594Q96JF6 807 aaPredicted RBP15.63■□□□□ 0.09
GABPB1-201ENST00000220429 PPP1R13BQ96KQ4 1090 aa15.63■□□□□ 0.09
GABPB1-201ENST00000220429 FAM210AQ96ND0 272 aa15.63■□□□□ 0.09
GABPB1-201ENST00000220429 ZNF609O15014 1411 aa15.62■□□□□ 0.09
GABPB1-201ENST00000220429 ST3GAL1Q11201 340 aa15.62■□□□□ 0.09
GABPB1-201ENST00000220429 LRRC24Q50LG9 513 aa15.62■□□□□ 0.09
GABPB1-201ENST00000220429 CPLX2Q6PUV4 134 aaKnown RBP15.62■□□□□ 0.09
GABPB1-201ENST00000220429 TEX11Q8IYF3 940 aa15.62■□□□□ 0.09
GABPB1-201ENST00000220429 GPR161Q8N6U8 529 aaKnown RBP15.62■□□□□ 0.09
GABPB1-201ENST00000220429 VEZTQ9HBM0 779 aa15.62■□□□□ 0.09
GABPB1-201ENST00000220429 ZNF330Q9Y3S2 320 aaPredicted RBP15.62■□□□□ 0.09
GABPB1-201ENST00000220429 SYT1P21579 422 aa15.62■□□□□ 0.09
GABPB1-201ENST00000220429 ZNF165P49910 485 aa15.62■□□□□ 0.09
GABPB1-201ENST00000220429 TCIRG1Q13488 830 aa15.62■□□□□ 0.09
GABPB1-201ENST00000220429 ME3Q16798 604 aa15.62■□□□□ 0.09
GABPB1-201ENST00000220429 ZSCAN31Q96LW9 406 aaPredicted RBP15.62■□□□□ 0.09
GABPB1-201ENST00000220429 EPC1Q9H2F5 836 aa15.62■□□□□ 0.09
GABPB1-201ENST00000220429 SMC3Q9UQE7 1217 aa15.62■□□□□ 0.09
GABPB1-201ENST00000220429 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.62■□□□□ 0.09
GABPB1-201ENST00000220429 F13A1P00488 732 aa15.61■□□□□ 0.09
GABPB1-201ENST00000220429 IL15P40933 162 aaPredicted RBP15.61■□□□□ 0.09
GABPB1-201ENST00000220429 E4F1Q66K89 784 aaPredicted RBP15.61■□□□□ 0.09
GABPB1-201ENST00000220429 DDX46Q7L014 1031 aaKnown RBP15.61■□□□□ 0.09
GABPB1-201ENST00000220429 CKAP2LQ8IYA6 745 aa15.61■□□□□ 0.09
GABPB1-201ENST00000220429 ZNF526Q8TF50 670 aaPredicted RBP15.61■□□□□ 0.09
GABPB1-201ENST00000220429 GPR108Q9NPR9 543 aa15.61■□□□□ 0.09
GABPB1-201ENST00000220429 SH2B1Q9NRF2 756 aaPredicted RBP15.61■□□□□ 0.09
GABPB1-201ENST00000220429 AKAP2Q9Y2D5 859 aa15.61■□□□□ 0.09
GABPB1-201ENST00000220429 EYA2O00167 538 aa15.61■□□□□ 0.09
GABPB1-201ENST00000220429 CTAGE5O15320 804 aa15.61■□□□□ 0.09
GABPB1-201ENST00000220429 DTNBO60941 627 aa15.61■□□□□ 0.09
GABPB1-201ENST00000220429 TIMM10P62072 90 aa15.61■□□□□ 0.09
GABPB1-201ENST00000220429 SCRN1Q12765 414 aa15.61■□□□□ 0.09
GABPB1-201ENST00000220429 FBXW10Q5XX13 1052 aa15.61■□□□□ 0.09
GABPB1-201ENST00000220429 NEUROD6Q96NK8 337 aa15.61■□□□□ 0.09
GABPB1-201ENST00000220429 SEC62Q99442 399 aaKnown RBP15.61■□□□□ 0.09
GABPB1-201ENST00000220429 CARD6Q9BX69 1037 aa15.61■□□□□ 0.09
GABPB1-201ENST00000220429 DISP2A7MBM2 1401 aa15.61■□□□□ 0.09
GABPB1-201ENST00000220429 COL14A1Q05707 1796 aaKnown RBP15.6■□□□□ 0.09
GABPB1-201ENST00000220429 MAP2K7O14733 419 aa15.6■□□□□ 0.09
GABPB1-201ENST00000220429 STX6O43752 255 aa15.6■□□□□ 0.09
GABPB1-201ENST00000220429 GCFC2P16383 781 aaKnown RBP15.6■□□□□ 0.09
GABPB1-201ENST00000220429 PSMA5P28066 241 aa15.6■□□□□ 0.09
GABPB1-201ENST00000220429 LIG3P49916 1009 aa15.6■□□□□ 0.09
GABPB1-201ENST00000220429 APOBRQ0VD83 1088 aa15.6■□□□□ 0.09
GABPB1-201ENST00000220429 USPL1Q5W0Q7 1092 aa15.6■□□□□ 0.09
GABPB1-201ENST00000220429 SARM1Q6SZW1 724 aa15.6■□□□□ 0.09
GABPB1-201ENST00000220429 CTCFLQ8NI51 663 aaPredicted RBP15.6■□□□□ 0.09
GABPB1-201ENST00000220429 TPCN1Q9ULQ1 816 aa15.6■□□□□ 0.09
GABPB1-201ENST00000220429 CCDC129Q6ZRS4 1044 aa15.6■□□□□ 0.09
GABPB1-201ENST00000220429 ZNF513Q8N8E2 541 aaPredicted RBP15.6■□□□□ 0.09
GABPB1-201ENST00000220429 TATDN2Q93075 761 aa15.6■□□□□ 0.09
GABPB1-201ENST00000220429 PUS3Q9BZE2 481 aaKnown RBP15.6■□□□□ 0.09
GABPB1-201ENST00000220429 TNMDQ9H2S6 317 aa15.6■□□□□ 0.09
GABPB1-201ENST00000220429 PLEKHA4Q9H4M7 779 aa15.6■□□□□ 0.09
GABPB1-201ENST00000220429 PDE11AQ9HCR9 933 aa15.6■□□□□ 0.09
GABPB1-201ENST00000220429 ETAA1Q9NY74 926 aa15.6■□□□□ 0.09
GABPB1-201ENST00000220429 IPO7O95373 1038 aaKnown RBP15.59■□□□□ 0.09
GABPB1-201ENST00000220429 GJB2P29033 226 aa15.59■□□□□ 0.09
GABPB1-201ENST00000220429 LONRF2Q1L5Z9 754 aa15.59■□□□□ 0.09
GABPB1-201ENST00000220429 LRRFIP1Q32MZ4 808 aaKnown RBP15.59■□□□□ 0.09
GABPB1-201ENST00000220429 N4BP2L2Q92802 583 aaPredicted RBP15.59■□□□□ 0.09
GABPB1-201ENST00000220429 TCEANC2Q96MN5 208 aa15.59■□□□□ 0.09
GABPB1-201ENST00000220429 TEX13AQ9BXU3 409 aaPredicted RBP15.59■□□□□ 0.09
GABPB1-201ENST00000220429 HMG20BQ9P0W2 317 aa15.59■□□□□ 0.09
GABPB1-201ENST00000220429 MCM8Q9UJA3 840 aa15.59■□□□□ 0.09
GABPB1-201ENST00000220429 PHLPP2Q6ZVD8 1323 aa15.59■□□□□ 0.09
GABPB1-201ENST00000220429 PSDA5PKW4 1024 aaPredicted RBP15.59■□□□□ 0.09
GABPB1-201ENST00000220429 GPTP24298 496 aa15.59■□□□□ 0.09
GABPB1-201ENST00000220429 TBC1D8BQ0IIM8 1120 aa15.59■□□□□ 0.09
GABPB1-201ENST00000220429 BLOC1S2Q6QNY1 142 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms