RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Sult6b1P0CC03 303 aa19.36■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Traf1P39428 409 aa19.36■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Zmym1Q3TJB1 983 aa19.36■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Atp12aQ9Z1W8 1035 aa19.36■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Tbc1d2B1AVH7 922 aa19.36■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Exoc3l2D3YUP5 789 aa19.36■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Scgb2b19J3QM75 112 aa19.36■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Gng11P61953 73 aa19.36■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Adck2Q6NSR3 617 aa19.36■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Olfr119Q7TRJ5 321 aa19.36■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Tpcn2Q8BWC0 731 aa19.36■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Dock5B2RY04 1868 aa19.36■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Cfap99A0A140LIX9 648 aa19.36■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Gm5624F6ZZG8 207 aa19.36■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Folh1O35409 752 aa19.36■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Bcl2l13P59017 434 aa19.36■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Nol10Q5RJG1 687 aaKnown RBP19.36■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Coro7Q9D2V7 922 aa19.36■□□□□ 0.69
Ctcf-201ENSMUST00000005841 AfdnQ9QZQ1 1820 aaKnown RBP19.36■□□□□ 0.69
Ctcf-201ENSMUST00000005841 IkbkbO88351 757 aa19.35■□□□□ 0.69
Ctcf-201ENSMUST00000005841 GpkowQ56A08 488 aa19.35■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Asap2Q7SIG6 958 aa19.35■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Clec16aQ80U30 1036 aa19.35■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Cdc23Q8BGZ4 597 aa19.35■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Ankk1Q8BZ25 745 aa19.35■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Epc1Q8C9X6 813 aa19.35■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Ccer1Q9CQL2 403 aa19.35■□□□□ 0.69
Ctcf-201ENSMUST00000005841 ErmnQ5EBJ4 281 aa19.35■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Rasal3Q8C2K5 1041 aa19.35■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Crb1Q8VHS2 1405 aa19.35■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Cbx6Q9DBY5 414 aa19.35■□□□□ 0.69
Ctcf-201ENSMUST00000005841 LratQ9JI60 231 aa19.35■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Vstm4T1NXB5 319 aa19.35■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Cfap44E9Q5M6 1843 aa19.35■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Adssl1P28650 457 aa19.35■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Pabpn1Q8CCS6 302 aaKnown RBP19.35■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Sash3Q8K352 380 aa19.35■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Cdc45Q9Z1X9 566 aa19.35■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Chrm1P12657 460 aa19.34■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Nab2Q61127 525 aa19.34■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Gpt2Q8BGT5 522 aa19.34■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Card14Q99KF0 999 aa19.34■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Gm3409A0A0G2JE67 319 aa19.34■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Ranbp6Q8BIV3 1105 aa19.34■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Rdm1Q9CQK3 281 aa19.34■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Prl3d3A0A0M6L0J6 224 aa19.33■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Cul4bA2A432 970 aaKnown RBP19.33■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Gm10134F6ZQC6 126 aa19.33■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Vsnl1P62761 191 aa19.33■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Klhl30Q8C3F7 581 aa19.33■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Rbm17Q8JZX4 405 aaKnown RBP19.33■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Q9CYI0 393 aa19.33■□□□□ 0.69
Ctcf-201ENSMUST00000005841 Desi2Q9D291 194 aa19.33■□□□□ 0.69
Ctcf-201ENSMUST00000005841 A0A1L1SQF0 893 aa19.33■□□□□ 0.68
Ctcf-201ENSMUST00000005841 Grin1P35438 938 aa19.33■□□□□ 0.68
Ctcf-201ENSMUST00000005841 Ccdc57Q6PHN1 1016 aa19.33■□□□□ 0.68
Ctcf-201ENSMUST00000005841 MicalclQ9D5U9 680 aa19.33■□□□□ 0.68
Ctcf-201ENSMUST00000005841 TnrQ8BYI9 1358 aa19.33■□□□□ 0.68
Ctcf-201ENSMUST00000005841 Rexo5D3YW29 759 aa19.33■□□□□ 0.68
Ctcf-201ENSMUST00000005841 Acad12D3Z7X0 555 aa19.33■□□□□ 0.68
Ctcf-201ENSMUST00000005841 Mrps31Q61733 384 aaKnown RBP19.33■□□□□ 0.68
Ctcf-201ENSMUST00000005841 Golim4Q8BXA1 655 aa19.33■□□□□ 0.68
Ctcf-201ENSMUST00000005841 Zfp142G5E869 1843 aa19.33■□□□□ 0.68
Ctcf-201ENSMUST00000005841 PdclQ9DBX2 301 aa19.32■□□□□ 0.68
Ctcf-201ENSMUST00000005841 Epb41l2O70318 988 aaKnown RBP19.32■□□□□ 0.68
Ctcf-201ENSMUST00000005841 Bag1Q60739 355 aa19.32■□□□□ 0.68
Ctcf-201ENSMUST00000005841 Ovgp1Q62010 721 aa19.32■□□□□ 0.68
Ctcf-201ENSMUST00000005841 Vipas39Q8BGQ1 491 aa19.32■□□□□ 0.68
Ctcf-201ENSMUST00000005841 Q8K2W9 541 aa19.32■□□□□ 0.68
Ctcf-201ENSMUST00000005841 Taf6lQ8R2K4 616 aa19.32■□□□□ 0.68
Ctcf-201ENSMUST00000005841 Gnl2Q99LH1 728 aaKnown RBP19.32■□□□□ 0.68
Ctcf-201ENSMUST00000005841 NagaQ9QWR8 415 aa19.32■□□□□ 0.68
Ctcf-201ENSMUST00000005841 Setdb1O88974 1307 aa19.32■□□□□ 0.68
Ctcf-201ENSMUST00000005841 CebpaP53566 359 aa19.32■□□□□ 0.68
Ctcf-201ENSMUST00000005841 Trim25Q61510 634 aaKnown RBP19.32■□□□□ 0.68
Ctcf-201ENSMUST00000005841 Ankib1Q6ZPS6 1085 aa19.32■□□□□ 0.68
Ctcf-201ENSMUST00000005841 Smc1bQ920F6 1248 aa19.32■□□□□ 0.68
Ctcf-201ENSMUST00000005841 Trap1Q9CQN1 706 aaKnown RBP19.32■□□□□ 0.68
Ctcf-201ENSMUST00000005841 Tubb2aQ7TMM9 445 aa19.31■□□□□ 0.68
Ctcf-201ENSMUST00000005841 Cfap69Q8BH53 942 aa19.31■□□□□ 0.68
Ctcf-201ENSMUST00000005841 Alx1Q8C8B0 326 aa19.31■□□□□ 0.68
Ctcf-201ENSMUST00000005841 Tubb2bQ9CWF2 445 aa19.31■□□□□ 0.68
Ctcf-201ENSMUST00000005841 Rcan1Q9JHG6 198 aa19.31■□□□□ 0.68
Ctcf-201ENSMUST00000005841 Calcoco2A2A6M5 331 aa19.31■□□□□ 0.68
Ctcf-201ENSMUST00000005841 Cyp3a59D3Z2W7 503 aa19.31■□□□□ 0.68
Ctcf-201ENSMUST00000005841 Tubgcp2Q921G8 905 aa19.31■□□□□ 0.68
Ctcf-201ENSMUST00000005841 Rad23aP54726 363 aa19.3■□□□□ 0.68
Ctcf-201ENSMUST00000005841 Zfp446Q8C9M8 523 aa19.3■□□□□ 0.68
Ctcf-201ENSMUST00000005841 Phc3Q8CHP6 981 aa19.3■□□□□ 0.68
Ctcf-201ENSMUST00000005841 Cyp2d9P11714 504 aa19.3■□□□□ 0.68
Ctcf-201ENSMUST00000005841 Cdr2P97817 455 aa19.3■□□□□ 0.68
Ctcf-201ENSMUST00000005841 Gnat3Q3V3I2 354 aa19.3■□□□□ 0.68
Ctcf-201ENSMUST00000005841 Nfu1Q9QZ23 255 aa19.3■□□□□ 0.68
Ctcf-201ENSMUST00000005841 Cyp3a57D3YYZ0 503 aa19.3■□□□□ 0.68
Ctcf-201ENSMUST00000005841 Rgs22G3UYX5 1258 aa19.3■□□□□ 0.68
Ctcf-201ENSMUST00000005841 Nkx2-5P42582 318 aa19.3■□□□□ 0.68
Ctcf-201ENSMUST00000005841 Anks1bQ8BIZ1 1259 aa19.3■□□□□ 0.68
Ctcf-201ENSMUST00000005841 Hgh1Q8C3I8 393 aa19.3■□□□□ 0.68
Ctcf-201ENSMUST00000005841 Kcnh3Q9WVJ0 1095 aa19.3■□□□□ 0.68
Ctcf-201ENSMUST00000005841 Kifc2O08672 792 aa19.29■□□□□ 0.68
Retrieved 100 of 22,080 RNA–protein pairs in 147.9 ms