RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 THAP8Q8NA92 274 aa16.19■□□□□ 0.18
CACNA1A-257ENST00000638009 TRBV7-1A0A0A6YYK4 115 aa16.19■□□□□ 0.18
CACNA1A-257ENST00000638009 RAMP1O60894 148 aa16.19■□□□□ 0.18
CACNA1A-257ENST00000638009 TGIF1Q15583 401 aa16.19■□□□□ 0.18
CACNA1A-257ENST00000638009 RCHY1Q96PM5 261 aa16.19■□□□□ 0.18
CACNA1A-257ENST00000638009 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.18■□□□□ 0.18
CACNA1A-257ENST00000638009 ZNF561-AS1K7EIQ3 104 aa16.18■□□□□ 0.18
CACNA1A-257ENST00000638009 YPEL1O60688 119 aa16.18■□□□□ 0.18
CACNA1A-257ENST00000638009 YPEL2Q96QA6 119 aa16.18■□□□□ 0.18
CACNA1A-257ENST00000638009 PLXNA4Q9HCM2 1894 aa16.18■□□□□ 0.18
CACNA1A-257ENST00000638009 NRXN3Q9Y4C0 1643 aa16.18■□□□□ 0.18
CACNA1A-257ENST00000638009 PSG3Q16557 428 aa16.18■□□□□ 0.18
CACNA1A-257ENST00000638009 A0A0U1RRA0 63 aa16.18■□□□□ 0.18
CACNA1A-257ENST00000638009 RPL39P5Q59GN2 51 aa16.17■□□□□ 0.18
CACNA1A-257ENST00000638009 PSG8Q9UQ74 426 aa16.17■□□□□ 0.18
CACNA1A-257ENST00000638009 A0A0J9YW62 118 aa16.17■□□□□ 0.18
CACNA1A-257ENST00000638009 GFI1BQ5VTD9 330 aa16.17■□□□□ 0.18
CACNA1A-257ENST00000638009 C5orf47Q569G3 176 aa16.17■□□□□ 0.18
CACNA1A-257ENST00000638009 LEAP2Q969E1 77 aa16.17■□□□□ 0.18
CACNA1A-257ENST00000638009 FBXL15Q9H469 300 aa16.17■□□□□ 0.18
CACNA1A-257ENST00000638009 TRBV5-3A0A0A0MS03 114 aa16.17■□□□□ 0.18
CACNA1A-257ENST00000638009 IGHV3-35A0A0C4DH35 117 aa16.17■□□□□ 0.18
CACNA1A-257ENST00000638009 LOC105371267A0A1B0GV96 52 aa16.17■□□□□ 0.18
CACNA1A-257ENST00000638009 C8orf82Q6P1X6 216 aaPredicted RBP16.17■□□□□ 0.18
CACNA1A-257ENST00000638009 C9orf50Q5SZB4 431 aa16.17■□□□□ 0.18
CACNA1A-257ENST00000638009 D6R8Y8 96 aa16.17■□□□□ 0.18
CACNA1A-257ENST00000638009 IGFBP3P17936 291 aaPredicted RBP16.17■□□□□ 0.18
CACNA1A-257ENST00000638009 MUC21A0A0G2JKD1 596 aa16.16■□□□□ 0.18
CACNA1A-257ENST00000638009 MUC21A0A140T8X8 626 aa16.16■□□□□ 0.18
CACNA1A-257ENST00000638009 SYS1-DBNDD2H3BUS1 97 aa16.16■□□□□ 0.18
CACNA1A-257ENST00000638009 MUC21Q5SSG8 566 aa16.16■□□□□ 0.18
CACNA1A-257ENST00000638009 ZNF625Q96I27 306 aaPredicted RBP16.16■□□□□ 0.18
CACNA1A-257ENST00000638009 Q6ZS52 159 aa16.16■□□□□ 0.18
CACNA1A-257ENST00000638009 LYPD1Q8N2G4 141 aa16.16■□□□□ 0.18
CACNA1A-257ENST00000638009 IGHV3OR16-13A0A075B7E8 117 aa16.16■□□□□ 0.18
CACNA1A-257ENST00000638009 IGHV3-74A0A0B4J1X5 117 aa16.16■□□□□ 0.18
CACNA1A-257ENST00000638009 TEX38Q6PEX7 206 aa16.16■□□□□ 0.18
CACNA1A-257ENST00000638009 MIR17HGQ75NE6 70 aa16.16■□□□□ 0.18
CACNA1A-257ENST00000638009 SRSF2Q01130 221 aaKnown RBP16.16■□□□□ 0.18
CACNA1A-257ENST00000638009 RMI2Q96E14 147 aa16.16■□□□□ 0.18
CACNA1A-257ENST00000638009 FCN3O75636 299 aa16.15■□□□□ 0.18
CACNA1A-257ENST00000638009 ATP5G3P48201 142 aa16.15■□□□□ 0.18
CACNA1A-257ENST00000638009 TMEM14DPA8MWL7 114 aa16.15■□□□□ 0.18
CACNA1A-257ENST00000638009 TRAV1-1A0A0B4J248 108 aa16.15■□□□□ 0.18
CACNA1A-257ENST00000638009 ACYP1P07311 99 aa16.15■□□□□ 0.18
CACNA1A-257ENST00000638009 A0A1B0GW64 132 aa16.15■□□□□ 0.18
CACNA1A-257ENST00000638009 NDUFS5O43920 106 aa16.15■□□□□ 0.18
CACNA1A-257ENST00000638009 CISD3P0C7P0 127 aa16.15■□□□□ 0.18
CACNA1A-257ENST00000638009 A0A087X0K7 114 aa16.14■□□□□ 0.17
CACNA1A-257ENST00000638009 ADAMTSL3P82987 1691 aa16.14■□□□□ 0.17
CACNA1A-257ENST00000638009 KLRD1Q13241 179 aa16.14■□□□□ 0.17
CACNA1A-257ENST00000638009 EFNB3Q15768 340 aa16.14■□□□□ 0.17
CACNA1A-257ENST00000638009 ANKRD29Q8N6D5 301 aa16.14■□□□□ 0.17
CACNA1A-257ENST00000638009 HIST3H2BBQ8N257 126 aa16.14■□□□□ 0.17
CACNA1A-257ENST00000638009 NABP1Q96AH0 204 aa16.14■□□□□ 0.17
CACNA1A-257ENST00000638009 KIAA1549LQ6ZVL6 1849 aa16.14■□□□□ 0.17
CACNA1A-257ENST00000638009 SPINK2P20155 84 aa16.14■□□□□ 0.17
CACNA1A-257ENST00000638009 ZAR1Q86SH2 424 aa16.14■□□□□ 0.17
CACNA1A-257ENST00000638009 TMEM141Q96I45 108 aa16.13■□□□□ 0.17
CACNA1A-257ENST00000638009 ZNF138P52744 262 aa16.13■□□□□ 0.17
CACNA1A-257ENST00000638009 SVIPQ8NHG7 77 aa16.13■□□□□ 0.17
CACNA1A-257ENST00000638009 SLC25A28Q96A46 364 aa16.13■□□□□ 0.17
CACNA1A-257ENST00000638009 A0A1W2PPV9 198 aa16.13■□□□□ 0.17
CACNA1A-257ENST00000638009 HRKO00198 91 aa16.13■□□□□ 0.17
CACNA1A-257ENST00000638009 PDE6HQ13956 83 aa16.13■□□□□ 0.17
CACNA1A-257ENST00000638009 C1orf122Q6ZSJ8 110 aa16.13■□□□□ 0.17
CACNA1A-257ENST00000638009 LY96Q9Y6Y9 160 aa16.13■□□□□ 0.17
CACNA1A-257ENST00000638009 LINC01545Q5VT33 79 aa16.13■□□□□ 0.17
CACNA1A-257ENST00000638009 A0A1W2PPI3 338 aa16.13■□□□□ 0.17
CACNA1A-257ENST00000638009 HOXB3P14651 431 aaPredicted RBP16.13■□□□□ 0.17
CACNA1A-257ENST00000638009 GFRA4Q9GZZ7 299 aa16.12■□□□□ 0.17
CACNA1A-257ENST00000638009 FUSP35637 526 aaKnown RBP eCLIP16.12■□□□□ 0.17
CACNA1A-257ENST00000638009 HAMPP81172 84 aa16.12■□□□□ 0.17
CACNA1A-257ENST00000638009 FOXG1P55316 489 aaPredicted RBP16.12■□□□□ 0.17
CACNA1A-257ENST00000638009 NBL1P41271 181 aa16.12■□□□□ 0.17
CACNA1A-257ENST00000638009 PRCDQ00LT1 54 aa16.12■□□□□ 0.17
CACNA1A-257ENST00000638009 PSG1P11464 419 aa16.12■□□□□ 0.17
CACNA1A-257ENST00000638009 MP68P56378 58 aa16.12■□□□□ 0.17
CACNA1A-257ENST00000638009 IGLV1-36A0A0B4J1U3 117 aa16.12■□□□□ 0.17
CACNA1A-257ENST00000638009 SMIM20Q8N5G0 67 aa16.12■□□□□ 0.17
CACNA1A-257ENST00000638009 IGHV3-23P01764 117 aa16.11■□□□□ 0.17
CACNA1A-257ENST00000638009 ZNF876PQ49A33 203 aa16.11■□□□□ 0.17
CACNA1A-257ENST00000638009 ZNF525Q8N782 197 aa16.11■□□□□ 0.17
CACNA1A-257ENST00000638009 IMMP1LQ96LU5 166 aa16.11■□□□□ 0.17
CACNA1A-257ENST00000638009 GLMPQ8WWB7 406 aa16.11■□□□□ 0.17
CACNA1A-257ENST00000638009 AGMATQ9BSE5 352 aa16.11■□□□□ 0.17
CACNA1A-257ENST00000638009 CD33P20138 364 aa16.11■□□□□ 0.17
CACNA1A-257ENST00000638009 COLCA1Q6ZS62 124 aa16.11■□□□□ 0.17
CACNA1A-257ENST00000638009 GPHA2Q96T91 129 aa16.1■□□□□ 0.17
CACNA1A-257ENST00000638009 CLPSL1A2RUU4 121 aa16.1■□□□□ 0.17
CACNA1A-257ENST00000638009 SPATA31B1PQ5VZV4 182 aa16.1■□□□□ 0.17
CACNA1A-257ENST00000638009 FBLN5Q9UBX5 448 aa16.1■□□□□ 0.17
CACNA1A-257ENST00000638009 TRGV1A0A0A0MS02 117 aa16.1■□□□□ 0.17
CACNA1A-257ENST00000638009 C7orf69Q9H7B7 122 aa16.1■□□□□ 0.17
CACNA1A-257ENST00000638009 RHODO00212 210 aa16.1■□□□□ 0.17
CACNA1A-257ENST00000638009 FAM181AQ8N9Y4 354 aa16.1■□□□□ 0.17
CACNA1A-257ENST00000638009 HLA-DMBP28068 263 aa16.1■□□□□ 0.17
CACNA1A-257ENST00000638009 STPG4Q8N801 248 aa16.1■□□□□ 0.17
CACNA1A-257ENST00000638009 C1orf159Q96HA4 380 aa16.1■□□□□ 0.17
CACNA1A-257ENST00000638009 NPIPB5A8MRT5 1133 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms