RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 ARL6IP6Q8N6S5 226 aa8.18□□□□□ -1.1
VPS25-203ENST00000589520 ZNF491Q8N8L2 437 aa8.18□□□□□ -1.1
VPS25-203ENST00000589520 LINC01356Q8N9X3 169 aa8.18□□□□□ -1.1
VPS25-203ENST00000589520 RNF125Q96EQ8 232 aa8.18□□□□□ -1.1
VPS25-203ENST00000589520 SHANK2-AS3Q9BTD1 123 aa8.18□□□□□ -1.1
VPS25-203ENST00000589520 ELOVL1Q9BW60 279 aa8.18□□□□□ -1.1
VPS25-203ENST00000589520 C7orf69Q9H7B7 122 aa8.18□□□□□ -1.1
VPS25-203ENST00000589520 OTORQ9NRC9 128 aa8.18□□□□□ -1.1
VPS25-203ENST00000589520 OSTCQ9NRP0 149 aa8.18□□□□□ -1.1
VPS25-203ENST00000589520 PITPNC1Q9UKF7 332 aa8.18□□□□□ -1.1
VPS25-203ENST00000589520 EPDR1Q9UM22 224 aa8.18□□□□□ -1.1
VPS25-203ENST00000589520 IGHV3-21A0A0B4J1V1 117 aa8.17□□□□□ -1.1
VPS25-203ENST00000589520 GGTLC3B5MD39 225 aa8.17□□□□□ -1.1
VPS25-203ENST00000589520 H3BRN7 92 aa8.17□□□□□ -1.1
VPS25-203ENST00000589520 ISLRO14498 428 aa8.17□□□□□ -1.1
VPS25-203ENST00000589520 RNF224P0DH78 156 aa8.17□□□□□ -1.1
VPS25-203ENST00000589520 NDPQ00604 133 aa8.17□□□□□ -1.1
VPS25-203ENST00000589520 PDE6HQ13956 83 aa8.17□□□□□ -1.1
VPS25-203ENST00000589520 TMEM183BQ1AE95 376 aa8.17□□□□□ -1.1
VPS25-203ENST00000589520 MORN5Q5VZ52 161 aa8.17□□□□□ -1.1
VPS25-203ENST00000589520 C5orf56Q8N8D9 126 aa8.17□□□□□ -1.1
VPS25-203ENST00000589520 C5orf17Q8NAS9 161 aa8.17□□□□□ -1.1
VPS25-203ENST00000589520 NECAP1Q8NC96 275 aa8.17□□□□□ -1.1
VPS25-203ENST00000589520 OR4F17Q8NGA8 305 aa8.17□□□□□ -1.1
VPS25-203ENST00000589520 DERL1Q9BUN8 251 aa8.17□□□□□ -1.1
VPS25-203ENST00000589520 TMUB1Q9BVT8 246 aa8.17□□□□□ -1.1
VPS25-203ENST00000589520 SAV1Q9H4B6 383 aaPredicted RBP8.17□□□□□ -1.1
VPS25-203ENST00000589520 FBXL7Q9UJT9 491 aa8.17□□□□□ -1.1
VPS25-203ENST00000589520 KLF12Q9Y4X4 402 aa8.17□□□□□ -1.1
VPS25-203ENST00000589520 ADGRG4Q8IZF6 3080 aa8.17□□□□□ -1.1
VPS25-203ENST00000589520 TRBV20OR9-2A0A075B6H5 130 aa8.16□□□□□ -1.1
VPS25-203ENST00000589520 TRBV7-1A0A0A6YYK4 115 aa8.16□□□□□ -1.1
VPS25-203ENST00000589520 TRBV9A0A0B4J1U6 114 aa8.16□□□□□ -1.1
VPS25-203ENST00000589520 PGPA6NDG6 321 aa8.16□□□□□ -1.1
VPS25-203ENST00000589520 H3BUA1 57 aa8.16□□□□□ -1.1
VPS25-203ENST00000589520 PEX7O00628 323 aa8.16□□□□□ -1.1
VPS25-203ENST00000589520 UBE2CO00762 179 aa8.16□□□□□ -1.1
VPS25-203ENST00000589520 PDZD2O15018 2839 aa8.16□□□□□ -1.1
VPS25-203ENST00000589520 S100A8P05109 93 aa8.16□□□□□ -1.1
VPS25-203ENST00000589520 PYYP10082 97 aa8.16□□□□□ -1.1
VPS25-203ENST00000589520 GP9P14770 177 aa8.16□□□□□ -1.1
VPS25-203ENST00000589520 ERVFC1-1P60608 527 aa8.16□□□□□ -1.1
VPS25-203ENST00000589520 LOXL1Q08397 574 aaPredicted RBP8.16□□□□□ -1.1
VPS25-203ENST00000589520 CENPWQ5EE01 88 aa8.16□□□□□ -1.1
VPS25-203ENST00000589520 RUSC1-AS1Q66K80 236 aa8.16□□□□□ -1.1
VPS25-203ENST00000589520 ZNF600Q6ZNG1 722 aa8.16□□□□□ -1.1
VPS25-203ENST00000589520 C19orf35Q6ZS72 473 aa8.16□□□□□ -1.1
VPS25-203ENST00000589520 FAM231DQ6ZW35 169 aa8.16□□□□□ -1.1
VPS25-203ENST00000589520 ZFP82Q8N141 532 aa8.16□□□□□ -1.1
VPS25-203ENST00000589520 OR5T1Q8NG75 326 aa8.16□□□□□ -1.1
VPS25-203ENST00000589520 PSMG3-AS1Q96PY0 264 aa8.16□□□□□ -1.1
VPS25-203ENST00000589520 IL36BQ9NZH7 164 aa8.16□□□□□ -1.1
VPS25-203ENST00000589520 NAV3Q8IVL0 2385 aa8.15□□□□□ -1.1
VPS25-203ENST00000589520 TRAV40A0A0B4J280 105 aa8.15□□□□□ -1.1
VPS25-203ENST00000589520 TRBV6-1A0A0K0K1D8 114 aa8.15□□□□□ -1.1
VPS25-203ENST00000589520 SERTM2A0A1B0GWG4 89 aa8.15□□□□□ -1.1
VPS25-203ENST00000589520 FBLL1A6NHQ2 334 aaKnown RBP8.15□□□□□ -1.1
VPS25-203ENST00000589520 OR2J3O76001 311 aa8.15□□□□□ -1.1
VPS25-203ENST00000589520 IL4P05112 153 aa8.15□□□□□ -1.1
VPS25-203ENST00000589520 SLC25A5P05141 298 aaKnown RBP8.15□□□□□ -1.1
VPS25-203ENST00000589520 RPL7P18124 248 aaKnown RBP8.15□□□□□ -1.1
VPS25-203ENST00000589520 UBE2G1P62253 170 aa8.15□□□□□ -1.1
VPS25-203ENST00000589520 SNRPEP62304 92 aaKnown RBP8.15□□□□□ -1.1
VPS25-203ENST00000589520 RANP62826 216 aaKnown RBP8.15□□□□□ -1.1
VPS25-203ENST00000589520 KLF17Q5JT82 389 aaPredicted RBP8.15□□□□□ -1.1
VPS25-203ENST00000589520 PRSS57Q6UWY2 283 aa8.15□□□□□ -1.1
VPS25-203ENST00000589520 BAGE2Q86Y30 109 aa8.15□□□□□ -1.1
VPS25-203ENST00000589520 EEF1AKMT3Q96AZ1 226 aa8.15□□□□□ -1.1
VPS25-203ENST00000589520 FMC1Q96HJ9 113 aa8.15□□□□□ -1.1
VPS25-203ENST00000589520 IGF2BP2-AS1Q96M15 143 aa8.15□□□□□ -1.1
VPS25-203ENST00000589520 ATG101Q9BSB4 218 aa8.15□□□□□ -1.1
VPS25-203ENST00000589520 HIF1ANQ9NWT6 349 aa8.15□□□□□ -1.1
VPS25-203ENST00000589520 ZNF580Q9UK33 172 aa8.15□□□□□ -1.1
VPS25-203ENST00000589520 A0A0U1RQK1 487 aa8.14□□□□□ -1.11
VPS25-203ENST00000589520 A0A1W2PPQ1 181 aa8.14□□□□□ -1.11
VPS25-203ENST00000589520 A6NDX4 124 aa8.14□□□□□ -1.11
VPS25-203ENST00000589520 ZNF98A6NK75 572 aa8.14□□□□□ -1.11
VPS25-203ENST00000589520 FAM223BA6NKX1 122 aa8.14□□□□□ -1.11
VPS25-203ENST00000589520 K7EQM0 130 aa8.14□□□□□ -1.11
VPS25-203ENST00000589520 BMPR1BO00238 502 aa8.14□□□□□ -1.11
VPS25-203ENST00000589520 ATP6V0E1O15342 81 aa8.14□□□□□ -1.11
VPS25-203ENST00000589520 TRGC2P03986 189 aa8.14□□□□□ -1.11
VPS25-203ENST00000589520 IGF1P05019 195 aa8.14□□□□□ -1.11
VPS25-203ENST00000589520 PSG9Q00887 426 aa8.14□□□□□ -1.11
VPS25-203ENST00000589520 RPEL1Q2QD12 228 aa8.14□□□□□ -1.11
VPS25-203ENST00000589520 KRTAP21-3Q3LHN1 58 aa8.14□□□□□ -1.11
VPS25-203ENST00000589520 FBLN7Q53RD9 439 aa8.14□□□□□ -1.11
VPS25-203ENST00000589520 FAM209BQ5JX69 171 aa8.14□□□□□ -1.11
VPS25-203ENST00000589520 FAM223AQ8IWN6 122 aa8.14□□□□□ -1.11
VPS25-203ENST00000589520 CMTM2Q8TAZ6 248 aa8.14□□□□□ -1.11
VPS25-203ENST00000589520 ZNF502Q8TBZ5 544 aa8.14□□□□□ -1.11
VPS25-203ENST00000589520 PIFOQ8TCI5 191 aa8.14□□□□□ -1.11
VPS25-203ENST00000589520 BLNKQ8WV28 456 aa8.14□□□□□ -1.11
VPS25-203ENST00000589520 GPR82Q96P67 336 aa8.14□□□□□ -1.11
VPS25-203ENST00000589520 HSPB9Q9BQS6 159 aa8.14□□□□□ -1.11
VPS25-203ENST00000589520 Q9H3A6 140 aa8.14□□□□□ -1.11
VPS25-203ENST00000589520 GSX1Q9H4S2 264 aaPredicted RBP8.14□□□□□ -1.11
VPS25-203ENST00000589520 RABAC1Q9UI14 185 aa8.14□□□□□ -1.11
VPS25-203ENST00000589520 ARHGAP32A7KAX9 2087 aa8.14□□□□□ -1.11
VPS25-203ENST00000589520 TRBV19A0A075B6N1 114 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms